LOC110534014 (LOC106603122)


Basic Information

Item Value
gene id LOC110534014
gene name LOC106603122
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 44613844 ~ 44622676 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021618635.2
TTTGTTTCTGTCCTCCTATTGCGTTTTTCTCTTCGAAGAACACACCATGTCGCACCTTATGACCAAGCCATATGAGGAGCAATAATTAATGTGCATAATAAATTAAACTACACGCACGAACAGCGGACACTGTAGTAAGTTTGAACAAAAGAGACACCAGCGGCGAAGTTTCTCTCATTGGATGGACCATGACGAGTAACTATTTTTCTTACTGTAACTTTACGACTTCAGCTACATGAATGGACCATCGCATTGACTTTTCATTGCCACGAGAATGTGCCGTTAAGGATGGGGGAACCTGTTGTTTTACTGTGGGCATATGGACAGCATCCAAGACAATTTGTTGGCCCTGAGACGGTAACTCCATGCCAGATGTCAACATCAGCGATTCCCTGTTGTGAAGAAGAATGACTTTTGCTCCACAGCTTAACTCTGCGTCGCTCTGTGGAAGATGAACCACTCCTGTCTCTCCCAGACCAGTGACACCACCAATGTGACAGCAGATCCACTGGGGGGCCATGAGATATGggaggtggtggtgattgtaCTCATCACAGGGCCTCTCTCCCTGGTCACTATCATAGGTAACCTGCTGGTGGTGATCTCCTTCCGGGTCAACAGGCAGCTGCGCACCTTCAGCAATTACTTTCTGCTGAGCTTGGCGGTGGCGGATCTGATCCTGGGAGCAGTCTCTATGAACCTCTATGCTGTTTATATTATCATGGGACGCTGGACCCTGGGCAGCCTGGCCTGTGACGTCTGGCTGGCTGTGGATTATGTGGCCAGCAACGCCTCCGTCATGAACCTGCTGGTCATCAGCTTCGACCGCTTCTACTCCATCACCAGACCTCTCACCTACCGGGCCAAGCGCACCACACGCCGGGCAGCCGCAGCCATCGGCCTGGCCTGGGCCGTGTCCTTCATCCTGTGGGGGCCAGCCATCCTGTTCTGGCCCCATGTAGTGGGTAGGGAAGCACAGGACGCGGGTGAATGCTCTATCCCGTTCCTGACCGAGCCTGCTCTCACATTCGGCACGGCCATCGCTGCCTTCTACCTTCCTGTCACCATCATGGGAATCCTGTACTGGAAGATCTACTGGGAGATTGAGAAGCGAGCCCAGGGTCTGGAGGGGCTAATGGGGTCTGGGAGCagtggaggggcctcccaggtgTCTGGGCGAAGGGATGTTTACTCCAGCAGCACCAAGAGCAGTGTGAGCAGCTCCAGAGAGGTGCCTGTGGGCAGGGAGCAGAGCAGTGAGGTGTCCCAGGGCTGCTTCCCTGTGAGAGAGGAGCCTAAACAGAGCAGTGAGAGGAGAATAGCAACACTGTCATTGTCTCCCACCAAGGGGGCCTACAGGGAGGGCTGCAGAGACAGCACCTGTAACATAGATGAGGAAGAGCCtactgtctccctttcctcctcagAGGAAGAACCAGAGCAGACGCAGCAGGGGGCGAGCGCTAAGACAAGCCCTAAAGCCATGATCCCACTCAGAGACGCCCAGGGCAGAGACACCGTAGGGGCCATCAAACCCCTGACATCCAGGGCAGAGGACAGTACAGCAGGTCCACAGGGCAGGCAGCCCCCCCTAAGGGGCTCCACATCAGACTCCAGACGCCACAAGCAGCCCAAAGccaagaggaggaggaacacaATTGTCAGGGAGAAGAAGGCAGCCAGAACCCTGTGTGCCATCCTGCTGGCTTTCATCCTGACCTGGACGCCGTACAACATCATGGTGCTGGTGTCCGTCTCCTACTGCGTGCCCGAGAAGCTGTGGCAGCTTGGCTACTGGCTCTGCTACATCAACAGCACCGTCAACCCAGTCTGCTACGCCCTCTGCAACGAGCACTTCAGAGTCACCTTTAAGACGCTGCTGCTCTGCAGGCCGGGACAGAGGAACTGGGGAATGGCTTATAACGCCAACCATGCCTCCTTCAGGACACACAAGACCAGCAGTACTGTCTGAACTTCTTCAAAGCTAGACACTACCCTCTAGCTTAAGAAGAGTCAGACCTGCCCTAGTAAAAGACAATCCATGCAAGGGGATGATTTTTTGAAGAAGGCAGAGGAATTGCTTTTTGACTGTTCGGTAAGAAGGAAAAAGAAACAGACATGCTAAATATGATGGGCATTGGCATGCATAACAGTCAATAGCAGAAAACCTATTGCCTCAAAGTAGTCTTTCTTAAGAACATTAGATTGTATATATCTATGATAATCATGCAGTCTGTTTCTGCCCATGACCGTCTTCAAACCTTCCTTCCTCACCCTCCCCTTCAGTTCCTCTCCATGGAGCTGTTGGTCTGCCCGTTTTGACTTCGGGCCAGAGCCATGAAATGGCTTCTGTTTATGACATGTTTATTGAAACAGGGTTATGAATTGGTCCATATGCCTTAATGTTAAATCATCACCAGGAACTTGCAATACAAAAAAGGTACAAATATAACAGACACAAAGATTCCATCACTGATACTATAGTGCTTCAGTGATACTGAATGCACACTGCTGCAATAGAGAAAAGAGGACACGGCACCAAATACAGCCAGTgacaaatattttattttcatggggggaaaaaaaagataAAACCTTCTACCATAAAGGCAATATTCATTCACAACTCAAATAAAGTCCCAAAACTGTTCTACATCAACTGAATCAATTTCATTGCTGAATATGACGGCAAAACGAAAACCGTTCCGTTCCTGGAAACCGCCTCTAAACAAACACCCCAAAAAGTGTCATGAGAAATACTTGTTTAACGCTTTAGTATTTGTTAGTTGGCTATTGATATAACATGATAGTATAGCTAAATTATATTACACAACTTCCTTACACTTTGATCAATTCAAATCGGAGCATACCATTAGCACACATTATCATGCACTTGCTTGCCTGTTTTGCCTTTTTTTTTATACCATGTCTGCCAATGTATCCTGTGTTTTTTACTGTCACTAGTTAAGGTAAAAACATCTTCGCTAATTGTAAATAGTGTAATTTGTGTGCCAGACCTGTGGAGAGCATTGTGCCCAGCTTTgggggagaagagcagagagaaaaTACAATGTTCCCTTTCCATGAGACAAACAACTCAGACATGCAATTGATTCAGAAATGTGCCTTTAAGGTTCACCTTAGAATCCCTTTGTGCCCATCTTACAAATTATATAAATGTAGACCTATATATGACAATGTCAATACATTTTCCTCTAAGGAAAATGCTACAGTATAGCAAATGCAAGTGCACATACCAGTCTGTAGTTTGTGTTAACACACAACTGTCTGACTAGATCCTCTGATGGCTCCCCATCATTCCAATAACATTATCCCCCTGACAGTCCCAGTAGCACTTGTATTGCTCATTACTGCCCTCCTGTGGCTATAACTGAAGGGGAGTGTAGATCATGACAGTCACGTGAGGCCCCAGTGGAGCAGGTTAGAGCAGGGTGGGATGAGACTTCTGAGCCGGTATGGGAAGGGAAACAAAGTCCTGTGTTCAGTAGCCATTTCCCAACACATAACAAGGGGTCGGGTTCAGGACTAGTGCAGCTCTCTAGGACCTGTGTTGCCTACCAATGGAATATGTAACTATTGTTGGTAAAATGCTGACCGTaggtatacagtcgtggccaaaagttttgaaaattacacaaatattaattttcacaatgtctgctgcctcagtttgtataatggcaatttgcatatactccagaatgttatgaagagtgatcagatgaattgcaattaaatGCAAAGTCCCTCTTTTGCTAtgaaaatgaactgaatcccccccc

Function

NR:

description
muscarinic acetylcholine receptor M3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021618635.2 True 3803 mRNA 0.48 2 44613844 44622676

Neighbor

gene id symbol gene type direction distance location
LOC110534013 LOC106603121 coding upstream 11891 44574931 ~ 44601953 (+)
LOC110534011 LOC106603123 coding upstream 39974 44526662 ~ 44573870 (+)
LOC110534008 LOC106603125 coding upstream 110290 44494158 ~ 44503554 (+)
LOC110533118 LOC106563456 coding upstream 134700 44477086 ~ 44479144 (+)
LOC110534009 NA coding upstream 136569 44467605 ~ 44477275 (+)
LOC110534018 LOC106603117 coding downstream 142555 44765231 ~ 44767832 (+)
LOC110534023 LOC106603103 coding downstream 370610 44993286 ~ 45003089 (+)
LOC110534027 LOC106603105 coding downstream 418085 45040761 ~ 45124746 (+)
LOC100135968 LOC100135968 coding downstream 502876 45125552 ~ 45149685 (+)
LOC110534924 NA coding downstream 531736 45154412 ~ 45155664 (+)
G892281 NA non-coding upstream 3533 44610058 ~ 44610311 (+)
G892279 NA non-coding upstream 4706 44608937 ~ 44609138 (+)
G892187 NA non-coding upstream 9966 44602511 ~ 44603878 (+)
G892245 NA non-coding upstream 123895 44489650 ~ 44489949 (+)
G892208 NA non-coding upstream 125987 44487081 ~ 44487857 (+)
G892286 NA non-coding downstream 6603 44629279 ~ 44630603 (+)
G892293 NA non-coding downstream 15088 44637764 ~ 44639136 (+)
G892210 NA non-coding downstream 39390 44662066 ~ 44662371 (+)
G892198 NA non-coding downstream 41020 44663696 ~ 44663924 (+)
G892192 NA non-coding downstream 41586 44664262 ~ 44664623 (+)
LOC110533983 LOC106603147 other upstream 532434 44077660 ~ 44081410 (+)
G891951 LOC106603153 other upstream 673287 43938412 ~ 43940557 (+)
G891856 NA other upstream 870354 43742917 ~ 43743490 (+)
LOC110533965 LOC106603163 other upstream 872814 43732222 ~ 43741030 (+)
G891847 NA other upstream 900762 43712545 ~ 43713082 (+)
G892191 NA other downstream 32882 44655558 ~ 44659491 (+)
G892499 LOC106603104 other downstream 386158 45008834 ~ 45010849 (+)
LOC110534033 LOC106603099 other downstream 931561 45553481 ~ 45592329 (+)
LOC110534042 LOC106603097 other downstream 999581 45622164 ~ 45654911 (+)
LOC110534056 LOC106603182 other downstream 1278369 45898515 ~ 45901940 (+)

Expression


Co-expression Network