LOC118936697


Basic Information

Item Value
gene id LOC118936697
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 44840712 ~ 44843123 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005053676.1
ttgtcctatttagctagcttgctgttgctagctaatttgtcctgcgatataaacattgagttgttattttacttgaactgcacaaggtcctctactccgacaaattcattcacacataaaacggccTACCGAATCATTTCTATTCATCTCTCCTtgttccaggctttttcatcgttGAAGTCATATGGTGAttgcatctaaactttcatagtattaccacgacgcccggcaaaacagttcgtctttcaatcccCCACGTGGGTAtagccaatgaggagatggcacgtgggtacctgcttctataaactaatgaggagatgggagaggcaggactttcaacACGATCTGCGCcagaaatagaaaggacttctattttagcccttggcatgcAGACGCTTGTTGGTGcacgtgagcagtatcgcgcttaaagtcctgcctctcccatctcccatTTTATGTTGCATTTTATTTCATCAGAGGAACCAAAACGGCACAAAACAGGCTTCTTATGAAGCTGCAGATGTAAAGGACACATTTTGCATCATGATGAATCTACAGCAGGCAAGTCAAGTAGTCTGCCGACGGTCAGGCGCAGAGGCTGATGCTGCTTCCACTCTACGATGGGTGCACTTCACCCATCTTGGACTTCCTGGGGGACACTTTTAGACCATGGTAAAGCTAGGACAATATGGCCACCCCATCTCCAACTACAAGACCAGAACATGATAAAATGCACAATGACTccagaagacccccccccccccccccccccccccctccccacccacccTCAGTGCGACCATCAGTCCAAGCCCCAATGGACCAGGCACAAAGTCGGTCAAGTCCCGATGGAGAGACACCCCAGTCCTCCAGAAGGAGATTCCATCCCAGTGGGACTAATCAGGCAAAGAAGGAGGTATATGCCAAAGTTCTTGCTTACCTACGTGAACCAGCACCCACAGCCACAGAGTCTGATCCATCTGCAGTTTTTGGGATGCTACCAAGACTTCACTTGATGGCCAAAAGTGGACATCCAGCAACTGCTGCTAAAGTATCTTTTTCAAGATTTAAACAGTGAGTGAGAATTGAGAGAGCAGAGATATTGCAATGGTGAATTATGTTTGTATGTATTCATTGTGCATACATTATTAAATCGATTAACCTACA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005053676.1 True 1167 mRNA 0.47 4 44840712 44843123

Neighbor

gene id symbol gene type direction distance location
LOC110534021 LOC106603115 coding downstream 19405 44818510 ~ 44821307 (-)
LOC110534019 LOC106603116 coding downstream 27804 44775368 ~ 44812908 (-)
LOC110534017 LOC106603118 coding downstream 89292 44655544 ~ 44751420 (-)
LOC110534016 LOC106603120 coding downstream 192646 44640245 ~ 44648066 (-)
LOC110534015 LOC106603119 coding downstream 204375 44625922 ~ 44636337 (-)
LOC110534022 LOC106603114 coding upstream 2454 44845577 ~ 44851400 (-)
LOC110533119 LOC106603113 coding upstream 35484 44878607 ~ 44978256 (-)
LOC118966783 LOC106578716 coding upstream 111301 44954424 ~ 44958833 (-)
LOC110534024 LOC106603104 coding upstream 160118 45003241 ~ 45010947 (-)
LOC110534025 LOC106603111 coding upstream 170090 45011329 ~ 45017446 (-)
G893497 NA non-coding downstream 124158 44716298 ~ 44716554 (-)
G893477 NA non-coding downstream 185678 44654813 ~ 44655034 (-)
G893357 NA non-coding downstream 201586 44637774 ~ 44639126 (-)
G893356 LOC100194703 non-coding downstream 216908 44621421 ~ 44623804 (-)
G893508 NA non-coding upstream 111057 44954180 ~ 44959512 (-)
G893782 NA non-coding upstream 350006 45193129 ~ 45280890 (-)
G893822 NA non-coding upstream 419020 45262143 ~ 45263484 (-)
G893781 NA non-coding upstream 431351 45274474 ~ 45278522 (-)
G893834 NA non-coding upstream 445029 45288152 ~ 45288513 (-)
G893541 NA other downstream 71640 44768450 ~ 44769072 (-)
LOC110534000 frmd8 other downstream 531779 44303605 ~ 44308978 (-)
LOC110533117 stx5 other downstream 631448 44199178 ~ 44209264 (-)
G892965 NA other downstream 1129743 43710485 ~ 43710969 (-)
LOC110533962 LOC106603031 other downstream 1156792 43681449 ~ 43686604 (-)
LOC110534046 LOC107567170 other upstream 904192 45747090 ~ 45751405 (-)
G894917 NA other upstream 1074156 45917279 ~ 45918339 (-)
LOC110534118 LOC106603020 other upstream 2387681 47203241 ~ 47234608 (-)
G896841 NA other upstream 3144638 47987761 ~ 47989076 (-)

Expression


Co-expression Network