LOC110534022 (LOC106603114)


Basic Information

Item Value
gene id LOC110534022
gene name LOC106603114
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 44845577 ~ 44851400 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021618653.2
gggagggagaaaagAAGGAGGTGATTGTTGGGGAGTTAGGAAGAATGTATAAAAcgagggccagagagagggggagagagtgaatgAACAGAAAGAGAGCGAAGAAACATTGGTGGCAAGATTTCGAAAGCAATAAAGGACTATCGAAAAATCAGATACCATGTCCGCCAATAAGGATTGTCCACCTCTACTGATAATCCTCTTACTGGCCCTTCTTAATGGCTCCTCCTCCTTTGCCGCACCTTCAGACGTCTCATGGACCAACCACACAGCCACCCTGCCTCTGAGGCCAAACGGAGACATGTACGACCTGTTGCAGCTCCACTCAGATGACTACTACGATACGTTTACTGATCTACCCAGTCACCCCCCACCTGCCCCCTCACAGGGCACTAATCCTCAACCCTGTGACTATGACCCCTGCCGGGAGCTACAGCCTCCCTGTGCCCAGCTGGCAGCCTCCAGCGGCTGCCTGTGTCCGGGGGTGAGTGGGCCCCATGCGGCCCCAGAGGCCCCCTACCTGAAGAGACTGTCTATGGACGGTTCAGGAGTTGTGGTTCAGTGGTGTGCACCCTTTTCTTTCGTGACCCATTATGAGGTGGTGGTGGGTGCGCTGGAGCCCTTGCTGTTTGGTGTAGACCAGAGGAGTGGTACTGTGAGGGGGATGGGGCAGGGGGCAGAGGTGTGTGTGGTGGCGGTGAATTATGCAGGAGTCAGTGAGCGTCAGGAGGGGTCCTGTACGATGTACGAGCCCCCTGGGGACAGCAGTGTGGCCCTCAAAGCTGGGCTGATCGGAGGGGCCCTGGGGCTCCTGTTGCTCCTCTCACTGGCTGTCCTGCTCTGGAGGCACAGGGCTCGGAGAAAAGCAGATGCCAGGATCACCCAGGCCACAGAGGAAACACTATGAGAGGACTGAGGGGAGGCTATGGTAGAGGTTGACTCAGGGGTGGCTATCTAGGGCTGAGAATAGAGACATTTTATTCCTACTCTTATGGTTAAAAATAAAAGCTATGCAGTGTCACACCAAGTTAAACAGATATTTAGGAGACCACATGATCTCTCGTAACCAGTTACGAGTTACCAGCAGATGTCTTGATAATAGAACAATGCAGTGAGTCAGTGGTTCCTCCTGGGCCACATGCAATTGCTTTGGAGTTGTTATAAGACTGTTTTGATATTTCTATATGATCAGTCcataaataatctagacctacatgcaaAAGTACCTCTCGCGCTTTTGACAATGATTTCACATGAGGCCTATTTCACAAATACTTAGGCTcataaataaacatgtttttcttTCAATTATTTAACTacctacatcatgttatttcaagtTATCCATTTGGAGAGCAACATCACCTTGAATTTTAGAACTCCTTTAGGTATTCGAAAATGATCTATATAAAACATTGAATTCAGCCTTTACTACTCAAGCCCATAGAAtggcattgaataacacattcatgaaTGTTAAAAaatacagtaaaaaaatatattataaagaataa

Function

NR:

description
LRRN4 C-terminal-like protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021618653.2 True 1514 mRNA 0.48 2 44845577 44851400

Neighbor

gene id symbol gene type direction distance location
LOC118936697 NA coding downstream 2454 44840712 ~ 44843123 (-)
LOC110534021 LOC106603115 coding downstream 24270 44818510 ~ 44821307 (-)
LOC110534019 LOC106603116 coding downstream 32669 44775368 ~ 44812908 (-)
LOC110534017 LOC106603118 coding downstream 94157 44655544 ~ 44751420 (-)
LOC110534016 LOC106603120 coding downstream 197511 44640245 ~ 44648066 (-)
LOC110533119 LOC106603113 coding upstream 27207 44878607 ~ 44978256 (-)
LOC118966783 LOC106578716 coding upstream 103024 44954424 ~ 44958833 (-)
LOC110534024 LOC106603104 coding upstream 151841 45003241 ~ 45010947 (-)
LOC110534025 LOC106603111 coding upstream 161813 45011329 ~ 45017446 (-)
LOC110534028 LOC106603112 coding upstream 314218 45165618 ~ 45181163 (-)
G893497 NA non-coding downstream 129023 44716298 ~ 44716554 (-)
G893477 NA non-coding downstream 190543 44654813 ~ 44655034 (-)
G893357 NA non-coding downstream 206451 44637774 ~ 44639126 (-)
G893356 LOC100194703 non-coding downstream 221773 44621421 ~ 44623804 (-)
G893508 NA non-coding upstream 102780 44954180 ~ 44959512 (-)
G893782 NA non-coding upstream 341729 45193129 ~ 45280890 (-)
G893822 NA non-coding upstream 410743 45262143 ~ 45263484 (-)
G893781 NA non-coding upstream 423074 45274474 ~ 45278522 (-)
G893834 NA non-coding upstream 436752 45288152 ~ 45288513 (-)
G893541 NA other downstream 76505 44768450 ~ 44769072 (-)
LOC110534000 frmd8 other downstream 536644 44303605 ~ 44308978 (-)
LOC110533117 stx5 other downstream 636313 44199178 ~ 44209264 (-)
G892965 NA other downstream 1134608 43710485 ~ 43710969 (-)
LOC110533962 LOC106603031 other downstream 1161657 43681449 ~ 43686604 (-)
LOC110534046 LOC107567170 other upstream 895915 45747090 ~ 45751405 (-)
G894917 NA other upstream 1065879 45917279 ~ 45918339 (-)
LOC110534118 LOC106603020 other upstream 2379404 47203241 ~ 47234608 (-)
G896841 NA other upstream 3136361 47987761 ~ 47989076 (-)

Expression


Co-expression Network