Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118966785 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 45702245 ~ 45703069 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005053677.1 | True | 720 | mRNA | 0.40 | 2 | 45702245 | 45703069 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110534038 | chrdl2 | coding | upstream | 28408 | 45666364 ~ 45673837 (+) |
| LOC110534042 | LOC106603097 | coding | upstream | 47334 | 45622164 ~ 45654911 (+) |
| LOC110534033 | LOC106603099 | coding | upstream | 109916 | 45553481 ~ 45592329 (+) |
| LOC110534036 | LOC106563427 | coding | upstream | 152815 | 45459660 ~ 45549430 (+) |
| LOC110534037 | LOC106603102 | coding | upstream | 252122 | 45445078 ~ 45450123 (+) |
| LOC110534041 | LOC106603094 | coding | downstream | 2304 | 45705373 ~ 45708059 (+) |
| LOC118936928 | NA | coding | downstream | 13304 | 45716373 ~ 45716966 (+) |
| LOC110534032 | LOC106603093 | coding | downstream | 21748 | 45724817 ~ 45740843 (+) |
| LOC110534034 | LOC106603091 | coding | downstream | 56631 | 45759700 ~ 45770162 (+) |
| LOC110534050 | snaa | coding | downstream | 75214 | 45778283 ~ 45782588 (+) |
| G894028 | NA | non-coding | upstream | 25348 | 45676602 ~ 45676897 (+) |
| G894021 | NA | non-coding | upstream | 44197 | 45657818 ~ 45658048 (+) |
| G894007 | NA | non-coding | upstream | 82115 | 45619903 ~ 45620130 (+) |
| G894006 | NA | non-coding | upstream | 83308 | 45618622 ~ 45618937 (+) |
| G894068 | NA | non-coding | downstream | 81600 | 45784669 ~ 45785365 (+) |
| G894067 | NA | non-coding | downstream | 82454 | 45785523 ~ 45785778 (+) |
| G894070 | LOC106603090 | non-coding | downstream | 85105 | 45788174 ~ 45788596 (+) |
| G894071 | NA | non-coding | downstream | 85627 | 45788696 ~ 45788998 (+) |
| G894072 | NA | non-coding | downstream | 86373 | 45789442 ~ 45789736 (+) |
| G892499 | LOC106603104 | other | upstream | 691396 | 45008834 ~ 45010849 (+) |
| G892191 | NA | other | upstream | 1042754 | 44655558 ~ 44659491 (+) |
| LOC110533983 | LOC106603147 | other | upstream | 1620835 | 44077660 ~ 44081410 (+) |
| LOC110534056 | LOC106603182 | other | downstream | 197976 | 45898515 ~ 45901940 (+) |
| G894204 | LOC100136012 | other | downstream | 413216 | 46116285 ~ 46117943 (+) |
| G894437 | LOC106603023 | other | downstream | 924223 | 46627292 ~ 46700540 (+) |
| G895515 | NA | other | downstream | 1337445 | 47040514 ~ 47042783 (+) |
| LOC110511048 | LOC106603033 | other | downstream | 1438975 | 47132135 ~ 47151549 (+) |
