LOC110533129


Basic Information

Item Value
gene id LOC110533129
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 47409387 ~ 47420005 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC110533129
ATGAGCCTAGTTGCCAAGAAGATCAATGGGATACTGCAGGATCTAGGACTGCTCGATGTATGGCGTGACACCCACAAGACCGATAaggaatatactttttactcagcCCGCCACACTGAATACTCCAGGTACTGGATCAGTGAGTTCCCAGCAGTGTTGATCTGAACCCAGAGCTGGCAGAGCAGATCAGAGGGCTGAAGGAGCAGCTGGCCTAGCAGGGAGGGGAGCACCAGAACACACTCATCAACATTGACAGTGTGCCGTCATATGAGTGGAGAAGACAGGCTCAGTCTGACTTCAAGAAGAGGAAGACATCTCTCCTCTTTCATCACCTGGACTCATCTGAACTAGCAGAGCACCTCACCTTCATGGAGCATATGTCCTTCTGTCAGATAGCGTTCCAGGATCACCACAGCTTTGTGATGCATGACTGCACGGTAGACTTCATCACCCACTTCAACAGTGTGTCTCAGGGGATCCATCTGATGGTGctcagcaaccccccccccccccccccccccccccgcgcccTCAGAGGGCTGTAGTCATCTCCCATTTCATCAGGGTCGCACAGAGGTTGTTACAGCTGCAGAACTTCACCACTCTGATGGCAGTAGTGGGGGGTCTGAGCAGTAACTCCATCTCACGCCTCAAAGACACACAGTCCCACATTAGCAACGATGTGAGCAAGGTAAGGACTTTTGATAATCTGGTGGAGCTTATGACCTCCTGTGGGAAGTACAGGCAGTACCGCCTGCGTATCACAGAGAACACGGGCTTTCGCTTCCCCATCCTGGGAGTGCATCTCAAGGACCTCATAGCAGTGCACGTGGCCCTGTCCGACTGGAGCGACCGCGAGAAGACCAAGGACAACCTGGCCAAGACCCTGCAATGCAATCCTCCAGCAGCTAGCGCTGGCCCAGACTGCACCACTCAGTGTTGATGCCACCATGGACCTGCTCAACCTGCTCATGGTATCTCTGGACCAGTACCATTCGGAGGAAGAGATCTATCAGCTGTCTCTGCAGAGGGAGCCACGCACTGCCAGTCTGCCTGTGATAGAGGAATGGGCATCTTCAGTGAAGCCCAAAGCCAACCTCATACAGAAGATGGTTGCGTCAGTGCTTAAGCATTCTGACGCTGATGAAGACGACTACATCTCTACAGGAGGAATTTGAGATCATTAGGACCAAACTCCCATACCTCTGCAAGTTTGATGACCTGGATAAGAGTCAGGATGGTAGAATCAGTCAGGAGACGATCGACTACATCACCAAGGCCAGCTCTTTGCTGAACATCAAGATGGGCGTTCATCCACACGTTTTTAGAGATGACCTGCATGAAGCCTACACTTTGCCATCCCTGTAAAGGCATTGTAAGAATGCCTACGCTTCAACTATGTAAGACTCCATGTAAAAGCGGTTTTAATCATAAGGGACATAACATATGAATCAACATGGTGGAAACATTTAGTACCAAGACCTGTGTGTACAAATGATGTCTTGATCCCCCCATAGCAGAGGATGCTCAAATTATGACTAGTGCTGTTATGATTGTGGATTAAGATATTCAGAGAGCACCATTTAGGATGTAGAACAGTAAGGGTGCTGATGGTAATATTATGTAacaaaacacacccacacaccggTTCTGTTTCCTATTTTAaaagtgtttctctctctcgttttatCTCTTCCGGCGGACACTTCATCTTCTGCTTCATAGCCTATGCACTAACTTTAGCTCTGTTCTGTACTAATTGTTTTTGAATCAATCAAGTTGTCTGCAAATGACTTGACTCCTGAGAATGCTGACAAAGTCGTGGTTTGTAACTTTCCTTAACTGCTCACTGTTGATTGTATGATAGATTTGAATTGCTTCCTGCAATTTGGATAAAATTATCATTCAGCAATCGGTATCATTTTGAAAGTTACCACCAACCCTGTCCTTTTAAATGCTAAAAGTGACCGAAGGGGGGTTTTTACAAGAGATGTGTAAAGGTACAGTAATACAAGGATCTGTCAGAATTCTGCGCCCCACGCACAATGGTATGTAATAgtttattatactgaacaaaagtgGAAATGTAACAGTTTCAAAGTGtttactgtgttacagttcatataaggaaataggTCAATTTAAATAAGTTCATTAGACCCTTTAACTAtggttttcacatgactgggcaggggcacagccatgggtgggccttggagggcataggcccatccactggggagtcagacccagcca

Function

NR:

description
RAS guanyl-releasing protein 2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC110533129 True 2256 mRNA 0.47 10 47409387 47420005

Neighbor

gene id symbol gene type direction distance location
LOC110534120 LOC106563662 coding upstream 34815 47259241 ~ 47374572 (+)
LOC110511048 LOC106603033 coding upstream 258043 47132135 ~ 47151549 (+)
LOC110534117 UBE2D2 coding upstream 281414 47123869 ~ 47127973 (+)
LOC110533128 LOC106603037 coding upstream 374882 47031429 ~ 47034505 (+)
LOC110534113 LOC106603039 coding upstream 393175 47009349 ~ 47016212 (+)
LOC118936698 NA coding downstream 822 47420827 ~ 47426481 (+)
LOC110533130 LOC106602987 coding downstream 6613 47426618 ~ 47849279 (+)
LOC110534124 LOC106602984 coding downstream 437485 47857490 ~ 47887278 (+)
LOC110534126 LOC106602983 coding downstream 481554 47901559 ~ 47905308 (+)
cfb LOC106602980 coding downstream 517358 47937363 ~ 47950461 (+)
G895724 NA non-coding upstream 5107 47388841 ~ 47404280 (+)
G895687 NA non-coding upstream 25153 47383066 ~ 47384234 (+)
G895709 NA non-coding upstream 65817 47292167 ~ 47343570 (+)
G895717 NA non-coding upstream 102669 47301851 ~ 47306718 (+)
G895663 NA non-coding upstream 184870 47224278 ~ 47224517 (+)
G895845 NA non-coding downstream 102887 47522892 ~ 47545264 (+)
G895839 NA non-coding downstream 104689 47524694 ~ 47597056 (+)
G895856 NA non-coding downstream 185383 47605388 ~ 47616102 (+)
G895862 NA non-coding downstream 186349 47606354 ~ 47614212 (+)
G895863 NA non-coding downstream 187215 47607220 ~ 47613316 (+)
G895658 LOC106603032 other upstream 192316 47216407 ~ 47217071 (+)
G895652 LOC106603032 other upstream 204545 47202925 ~ 47204842 (+)
G895515 NA other upstream 366604 47040514 ~ 47042783 (+)
G894437 LOC106603023 other upstream 708847 46627292 ~ 46700540 (+)
G896043 NA other downstream 489711 47909716 ~ 47910975 (+)
G896217 NA other downstream 815177 48235182 ~ 48235616 (+)
G897244 dach2 other downstream 1256252 48676257 ~ 48677065 (+)
LOC110534184 LOC106563731 other downstream 1857697 49277626 ~ 49282746 (+)
LOC110534189 LOC106602925 other downstream 2010394 49426785 ~ 49432958 (+)

Expression


Co-expression Network