LOC110534127 (LOC106602982)


Basic Information

Item Value
gene id LOC110534127
gene name LOC106602982
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 47911037 ~ 47916446 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036933231.1
ccTTGAGGCGCCCAACTATGGGCAACTTTTTTATTCGCTGAGAAAAACAATTGTGATCCAGAAATTAAGAAGAATTGTGCTTTATTTGTCCAATTTAATAGTTCCGCATCGGGGGCACTTCTTCTCTGACCGactagtttatgtcttcactcaGCTACTACTGCCCTGTTGCTTGAGTTTTGAATAAGATACTGTGTTGTTGAATGTGTTGCATGTTTTAACTGTTGGAATAAATCAAATGAATAGCAAGCAAAAAAACAATGCACATAAGCCAAACATCCATTCAATTGGTTTGTACATAAAAGAGTGACATGCGCAGCGTGCCAGCCTGTGCGTAGAGCTACTGTTGTTACTTTGTTGTTCGTGTATGAGTCATATCCTCAACGTGGTGATCTACGAGGAACCACCCGATGTGTCGACACCAAGGATTTAATTCAATATAATTCGATGTATCAACTACATTTTCTATTTGAAGCATAAGGCAGACTCAAGAGTATCAGGATGACTACCCAGAAGAATGCCCCTGTGGACCGAGGCTGTGCTGTGGCCGTCATCATCTTTATCCTGGGACTGGGGACACTGCTGCCATGGAACTTCTTCATCACCGCCACTGAGTATTTCGATGACCGCCTCAAAGGGACCCCGTCAAGTTACGGAACGACCCCAGTTGCTAATGGAACGACCCCAGCTACTAATGGAACGACCCCAGTTACTAATGGAACGACCCCAGTGACTAAAGACTACGAGTTTGCCAGCTTTATGACACTTCTAGCCCAGCTTCCCCTGCTCCTCTTCACCCTGGCCAACTCTTTCCTGTATCAGCGTATCAGAGAGAAGGTCCGGATTGCTGTCAGTCTGGTCTCCatcctctgcctcttcctcctcacGGCCATTATGGTCAAGGTGCCCATGCAGCCCGACAGCTTCTTCTCTATTACCATGGCAACTATCTGGTTCATCAACTCTTTTGGAGCTGTGCTCCAGGGCAGTCTGTTTGGGCTGGTAGGAATGCTCCCCCCGAAGTACAGCACGTTGTTCATGAGTGGTCAGGGACTGGCAGGGATCTTCGCTGCCCTGGCCAGTCTGCTCTCTATCCTCAGTAAAACGGACAAGGCCAGTGCCGCTCTTGGATACTTCATCACCCCCTGTGTGGCGACTCTGCTCACTTTGCTCAGCTACTTACTACTGCCACACCTGGAGTTTGCCCGGTTCTACTTTGAGAAAAGTCAAAGTCACCATGGCCAACTGGCGACCCCAAACGAGCCTCTCGAAAGTGCAGACAAAGAAAAAGAAGCTTTGGCCAATGGTGACCTGAATGGCTACAACAATGAACCCATAATAACAAATGGTGATTTTGAGGCCAGTGGGACCAAAGAAGCCCTGTTCACGACGCAACAGACTGACAGTCACACCAGGTCATCTGTCCTTGCAGTCTTCAAAAAGGTTTGGGTGATGGCCCTCTGTGTGACATGTGTGCTGGCTGTCACACTGTCGGTTTTCCCCGCTGTCACAGTAAAAGTGAAGAGTGTGTATGGAAACAAGGAGTGGGACCGATACTTTCTCTGCGTCTGCTGCTTCATCGTCTTTAACGTCATGGACCTGATTGGCCGCAGTGTCACCTCTATGGTTCAGTGGCCCTCAAAGAGAAGCCGTCTGTTCCCTGTGCTCGTGGTGTCCCGCGTGGTCTTCATCCCTCTCATCATGCTGTGTAAGACTGACAACCGTCAGTACCTGCCAGTCCTGTTCTCCCACGACATTGCCTTCGTTGCCATCATGACATTATTCGCCCTGTCCAATGGATACTTAATCTGTCTCTGCATGTCCTACGCACCTCAGCTGGTGAGGTCTAAAGACTGTGAGACAGCAGGTGCCTTGATGACCTTCTTCCTggctctgggtctgtctctaggGGCAGCCCTCTCCTTCCTGCTGAGGAACCTGCTTTAGGGAACACTACcttctacatacagtggggcaaaaaagtatttagtcagccaccaattgtgcaagttctcccactta
>XM_021618812.2
CGCTCCATGTACAGGGACAGGGAACACTTCGCGCTAAATTCACTTCATTGAGCGCGTTTTGTCAGCATAGCAAGGACGATACCAGCTACTAAACAATTCGACTCTAACTGACTCAAGAGTATCAGGATGACTACCCAGAAGAATGCCCCTGTGGACCGAGGCTGTGCTGTGGCCGTCATCATCTTTATCCTGGGACTGGGGACACTGCTGCCATGGAACTTCTTCATCACCGCCACTGAGTATTTCGATGACCGCCTCAAAGGGACCCCGTCAAGTTACGGAACGACCCCAGTTGCTAATGGAACGACCCCAGCTACTAATGGAACGACCCCAGTTACTAATGGAACGACCCCAGTGACTAAAGACTACGAGTTTGCCAGCTTTATGACACTTCTAGCCCAGCTTCCCCTGCTCCTCTTCACCCTGGCCAACTCTTTCCTGTATCAGCGTATCAGAGAGAAGGTCCGGATTGCTGTCAGTCTGGTCTCCatcctctgcctcttcctcctcacGGCCATTATGGTCAAGGTGCCCATGCAGCCCGACAGCTTCTTCTCTATTACCATGGCAACTATCTGGTTCATCAACTCTTTTGGAGCTGTGCTCCAGGGCAGTCTGTTTGGGCTGGTAGGAATGCTCCCCCCGAAGTACAGCACGTTGTTCATGAGTGGTCAGGGACTGGCAGGGATCTTCGCTGCCCTGGCCAGTCTGCTCTCTATCCTCAGTAAAACGGACAAGGCCAGTGCCGCTCTTGGATACTTCATCACCCCCTGTGTGGCGACTCTGCTCACTTTGCTCAGCTACTTACTACTGCCACACCTGGAGTTTGCCCGGTTCTACTTTGAGAAAAGTCAAAGTCACCATGGCCAACTGGCGACCCCAAACGAGCCTCTCGAAAGTGCAGACAAAGAAAAAGAAGCTTTGGCCAATGGTGACCTGAATGGCTACAACAATGAACCCATAATAACAAATGGTGATTTTGAGGCCAGTGGGACCAAAGAAGCCCTGTTCACGACGCAACAGACTGACAGTCACACCAGGTCATCTGTCCTTGCAGTCTTCAAAAAGGTTTGGGTGATGGCCCTCTGTGTGACATGTGTGCTGGCTGTCACACTGTCGGTTTTCCCCGCTGTCACAGTAAAAGTGAAGAGTGTGTATGGAAACAAGGAGTGGGACCGATACTTTCTCTGCGTCTGCTGCTTCATCGTCTTTAACGTCATGGACCTGATTGGCCGCAGTGTCACCTCTATGGTTCAGTGGCCCTCAAAGAGAAGCCGTCTGTTCCCTGTGCTCGTGGTGTCCCGCGTGGTCTTCATCCCTCTCATCATGCTGTGTAAGACTGACAACCGTCAGTACCTGCCAGTCCTGTTCTCCCACGACATTGCCTTCGTTGCCATCATGACATTATTCGCCCTGTCCAATGGATACTTAATCTGTCTCTGCATGTCCTACGCACCTCAGCTGGTGAGGTCTAAAGACTGTGAGACAGCAGGTGCCTTGATGACCTTCTTCCTggctctgggtctgtctctaggGGCAGCCCTCTCCTTCCTGCTGAGGAACCTGCTTTAGGGAACACTACcttctacatacagtggggcaaaaaagtatttagtcagccaccaattgtgcaagttctcccactta

Function

NR:

description
equilibrative nucleoside transporter 2-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036933231.1 False 2022 mRNA 0.49 13 47911037 47916220
XM_021618812.2 True 1647 mRNA 0.52 13 47911037 47916446

Neighbor

gene id symbol gene type direction distance location
zgc:165604 LOC106602986 coding downstream 11041 47887391 ~ 47899996 (-)
LOC110534123 pygma coding downstream 507626 47388839 ~ 47403411 (-)
LOC110534122 NA coding downstream 526642 47383048 ~ 47384395 (-)
LOC110534119 LOC107684715 coding downstream 653420 47248137 ~ 47257617 (-)
LOC110534118 LOC106603020 coding downstream 676429 47203241 ~ 47234608 (-)
LOC110534130 NA coding upstream 35518 47951964 ~ 47957491 (-)
LOC110534132 LOC100194673 coding upstream 73866 47990312 ~ 48010716 (-)
LOC110534135 LOC106602978 coding upstream 99439 48012083 ~ 48021620 (-)
LOC110534134 LOC106602977 coding upstream 112131 48028577 ~ 48038667 (-)
LOC110534136 LOC106602975 coding upstream 130441 48046887 ~ 48049905 (-)
G896813 NA non-coding downstream 43968 47866619 ~ 47867069 (-)
G896648 LOC106602987 non-coding downstream 254163 47656333 ~ 47656874 (-)
G896596 NA non-coding downstream 342087 47513049 ~ 47568950 (-)
G896842 NA non-coding upstream 72686 47989132 ~ 47989347 (-)
G896913 NA non-coding upstream 105628 48022074 ~ 48022533 (-)
G896914 NA non-coding upstream 106604 48023050 ~ 48023301 (-)
G896923 NA non-coding upstream 127750 48044196 ~ 48044522 (-)
G894917 NA other downstream 1992698 45917279 ~ 45918339 (-)
LOC110534046 LOC107567170 other downstream 2160706 45747090 ~ 45751405 (-)
LOC110534025 LOC106603111 other downstream 2894990 45011329 ~ 45017446 (-)
G893541 NA other downstream 3141965 44768450 ~ 44769072 (-)
G896841 NA other upstream 71315 47987761 ~ 47989076 (-)
LOC110534172 LOC106602940 other upstream 965281 48881449 ~ 48907973 (-)
G899409 NA other upstream 2239746 50156192 ~ 50156902 (-)
G899421 NA other upstream 2265950 50182396 ~ 50182788 (-)
LOC110534220 LOC106602898 other upstream 2549021 50463950 ~ 50482534 (-)

Expression


Co-expression Network