trnas-gcu-8


Basic Information

Item Value
gene id trnas-gcu-8
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 48042052 ~ 48042133 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnas-gcu-8
Gacgaggtggccgagtggttaaggcgatggactgctaatccattgtgctctgcacgcgtgggttcgaatcccatcctcgtcg

Function

NR:

description
PREDICTED: dipeptidyl peptidase 3 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnas-gcu-8 True 82 mRNA 0.51 1 48042052 48042133

Neighbor

gene id symbol gene type direction distance location
rin1a LOC106602976 coding upstream 12476 48022058 ~ 48029576 (+)
LOC110534131 LOC106602979 coding upstream 54603 47963435 ~ 47987449 (+)
cfb LOC106602980 coding upstream 91591 47937363 ~ 47950461 (+)
LOC110534126 LOC106602983 coding upstream 136744 47901559 ~ 47905308 (+)
LOC110534124 LOC106602984 coding upstream 154774 47857490 ~ 47887278 (+)
LOC110534142 mcf2 coding downstream 100995 48143128 ~ 48158290 (+)
LOC110534145 fgf13 coding downstream 126869 48169002 ~ 48187520 (+)
LOC110534146 zic3 coding downstream 159252 48201242 ~ 48205374 (+)
LOC110534150 snx12 coding downstream 252052 48294185 ~ 48305120 (+)
LOC110534152 LOC106602957 coding downstream 265818 48307951 ~ 48321819 (+)
G896128 NA non-coding upstream 290 48041510 ~ 48041762 (+)
G896124 LOC106602978 non-coding upstream 21390 48020307 ~ 48020662 (+)
G896060 LOC106602978 non-coding upstream 23140 48018042 ~ 48018912 (+)
G896055 NA non-coding upstream 24149 48012060 ~ 48017903 (+)
G896122 NA non-coding upstream 30978 48010861 ~ 48011074 (+)
G896130 NA non-coding downstream 518 48042651 ~ 48042875 (+)
G896132 NA non-coding downstream 1635 48043768 ~ 48043981 (+)
G896058 LOC106602975 non-coding downstream 4757 48046890 ~ 48049851 (+)
G896146 f9 non-coding downstream 56003 48098136 ~ 48160174 (+)
G896155 fam89b non-coding downstream 62346 48104479 ~ 48106981 (+)
G896043 NA other upstream 131077 47909716 ~ 47910975 (+)
G895658 LOC106603032 other upstream 824981 47216407 ~ 47217071 (+)
G895652 LOC106603032 other upstream 837210 47202925 ~ 47204842 (+)
LOC110511048 LOC106603033 other upstream 890503 47132135 ~ 47151549 (+)
G895515 NA other upstream 999269 47040514 ~ 47042783 (+)
G896217 NA other downstream 193049 48235182 ~ 48235616 (+)
G897244 dach2 other downstream 634124 48676257 ~ 48677065 (+)
LOC110534184 LOC106563731 other downstream 1235569 49277626 ~ 49282746 (+)
LOC110534189 LOC106602925 other downstream 1388266 49426785 ~ 49432958 (+)
G898894 LOC106603005 other downstream 1992857 50034990 ~ 50037685 (+)

Expression


Co-expression Network