f9b (f9)


Basic Information

Item Value
gene id f9b
gene name f9
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 48158538 ~ 48163848 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036933248.1
ggagagagagagagagattcgctTACCCAGGTGGTCATGTGCAAATAGTCTCCTGTACTTTGGAGTTTAGAGTCAAGTTTGTCCATTCCTTTTTGGTCTTTTCTGTTTGGTGGGATATCAATGAGAATAACTACCTAGAGCAACAAGATGACAAGGATGTGTTTATTTGTCATAACTGCGGTATTCATGGTGGAAAACGAGTTCACTTCTGGAGCCTCAGTCTTTCTGTCCAGGCAGTCTGCAGACACCCTCCTGAGGAGGCAGAAGCGCTACAACACGGGGGCCTTCGAGGAGATGAAGAAGGACAACCTGGAGAGGGAGTGTATCGAGGAGCGCTGCAATCTGGAGGAGGCGAGGGAAGTGTTTGAGAACGAGGAGAAAACAATGCAATTCTGGGCGAATTACCTTGACGGGGACCAGTGTGAGTCCAACCCATGCCAGAATGGGGGGAAGTGTAAAGATGCCATGAGTGCTTACGTATGCTGGTGTCTACCTCAATTCAATGGGAAAAACTGTGAGATTGAGATGGCTAAGCAGTGTGACATTAACAACGGTGGCTGCTCCCACTTCTGTGTGCTGAACGCCCAGCATGCAGTGTGCGACTGTGCCACAGGGTATAGACTGGCTCCGGACAAGACCACCTGCGAACCAGAAGGACCATTCCCCTGTGGTCATCTTGGCAAGGCTATAAGCGCAACGCTGTCCTCTCGGTCGATCATCACAGCCGTAAATGTTGATCAGACTCGGCAGTCCGACGACAACGCCCTCAACATCACTGAGACACCGGAGGCCTCTGTGAACAACACCTTGGATTCTCTTGCGGTCAATGccaccaccacaaccccccaCCGCGTCAGCAGCACCAGTAGCAGCCACTCTTCCTCAGTGCTGGGGGACTTGCCCTCCTGGGCCTTCTTCCCAACACTGCCCACCATCCAGGAAGAGACATCCAGCGACCAGCGCATCGTTGGGGGAAACACAGTGAAACCTGGGGAGATCCCCTGGCAGGTGTCCCTGATGAGCAAGCTGACCGGGCAGAACTTCTGTGGTGGCACCCTCCTCAGTGAGATGTGGGTCATCACCGCTGCCCACTGCCTGAACGAGGGCAAGATTGGAACCTTCTTCATCAGAGTGGGGGAGCACAACATGCAGGTCAAGGAGGGGACGGAGCATGACCACGCTGTGGCTGAGCATCACATGCACCCGAGATACGACGCCAAGATAAGTCAGTACAACCACGACATAGCCCTGCTCAAGCTCCGCACGCCCGCACGCCTCTCTGACTACAGTCTCCCCATCTGTCTGGGGCCCAAGGACTTCACTGAGACGCTGCTGAGGGAGGCCTCTATCTCGGTGGTCAGCGGCTGGGGCAGGATGCGCTTCCAGGGCCCTGAGTCCTCCATACTGCAGAAGGTAGAGGTGCCCTACGTGGACAGGACCGAGTGCAAGGGCAGCAGCGCAGAACGGGTGTCCCGCTTCATGTTTTGTGCCGGTTACCGCAGCGAGCAGAAGGATTCATGCCAGGGGGACAGTGGCGGTCCCCATGTCACCCAGTACCGGGACACTTGGTTTCTGACAGGCATCGTGAGCTGGGGGGAGGAGTGCGCCAAGGAAGGGAAGTATGGCATCTACACACGTGTGTCACGTTACTTCCCGTGGATCTCCAATGTCACTGGGCTGAGAAGCATTGGTTCCAACTCTGAGCCTGATGTCTGAGAGgtccaagacccccccccccccccctgcccttACGTTACTTAACGTTTTGGATGATTACCATTGTGTAATGTTTAACTGGGCTGATTTACTCTTTGTTGATGAATTAAAAGGGATCCGGGAAATGA

Function

symbol description
f9 Enables calcium ion binding activity and endopeptidase activity. Involved in blood coagulation and zymogen activation. Located in extracellular space. Part of collagen-containing extracellular matrix. Implicated in X-linked thrombophilia due to factor IX defect; X-linked warfarin sensitivity; and hemophilia B. Biomarker of type 2 diabetes mellitus.

NR:

description
coagulation factor IX-like

GO:

id name namespace
GO:0008233 peptidase activity molecular_function

KEGG:

id description
K01321 F9; coagulation factor IX (Christmas factor)

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036933248.1 True 1844 mRNA 0.55 8 48158538 48163848

Neighbor

gene id symbol gene type direction distance location
LOC110533132 LOC106603010 coding downstream 35010 48121001 ~ 48123528 (-)
LOC110534140 LOC106602970 coding downstream 45175 48108673 ~ 48113363 (-)
fam89b fam89b coding downstream 50091 48104429 ~ 48108447 (-)
LOC110534139 LOC106602972 coding downstream 56665 48075787 ~ 48101873 (-)
LOC110534137 LOC106602974 coding downstream 83991 48070333 ~ 48074547 (-)
LOC110534147 LOC106602966 coding upstream 43058 48206906 ~ 48213074 (-)
htatsf1 LOC100135780 coding upstream 61878 48225726 ~ 48233416 (-)
LOC110533133 LOC106602963 coding upstream 83297 48247145 ~ 48255449 (-)
LOC118936699 LOC106602963 coding upstream 96478 48260326 ~ 48262871 (-)
fhl1b fhl1 coding upstream 99463 48263311 ~ 48284060 (-)
G896924 NA non-coding downstream 113411 48044847 ~ 48045127 (-)
G896923 NA non-coding downstream 114016 48044196 ~ 48044522 (-)
G896914 NA non-coding downstream 135237 48023050 ~ 48023301 (-)
G896913 NA non-coding downstream 136005 48022074 ~ 48022533 (-)
LOC110534135 LOC106602978 non-coding downstream 140962 48012083 ~ 48021620 (-)
G896998 NA non-coding upstream 49941 48213789 ~ 48213995 (-)
G897005 NA non-coding upstream 58082 48221930 ~ 48222254 (-)
G897007 NA non-coding upstream 59946 48223794 ~ 48224211 (-)
G897008 NA non-coding upstream 60445 48224293 ~ 48224717 (-)
G897011 NA non-coding upstream 72251 48236099 ~ 48236414 (-)
G896841 NA other downstream 169462 47987761 ~ 47989076 (-)
LOC110534118 LOC106603020 other downstream 925492 47203241 ~ 47234608 (-)
G894917 NA other downstream 2240199 45917279 ~ 45918339 (-)
LOC110534046 LOC107567170 other downstream 2408207 45747090 ~ 45751405 (-)
LOC110534025 LOC106603111 other downstream 3142491 45011329 ~ 45017446 (-)
LOC110534172 LOC106602940 other upstream 717879 48881449 ~ 48907973 (-)
G899409 NA other upstream 1992344 50156192 ~ 50156902 (-)
G899421 NA other upstream 2018548 50182396 ~ 50182788 (-)
LOC110534220 LOC106602898 other upstream 2301619 50463950 ~ 50482534 (-)
G899727 NA other upstream 2557138 50720986 ~ 50721603 (-)

Expression


Co-expression Network