LOC110533133 (LOC106602963)



Basic Information


Item Value
gene id LOC110533133
gene name LOC106602963
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 48247145 ~ 48255449 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>XM_036933249.1
TTGAATGGACTCTGGTGCTGTCTAGACAAGAGCAAAAGAGGTTTAGGGGTCTAAGAACCAGGACAACAATTGCATTCGTTTTGATGTGAATGATTTGAAAATACACCCTTTGTCCCTGTGAATTGTGCAGGAGTTGATGGCTTGTCTTCCTTGTTCCCCCAAGCGCCAGGGAGTTGTCCTGAGCACCgacaccagaccagacagggCCTGTTTGTGTGGCCAGGCACCTGGGCCCCCCGGACTGCCACGCTGCCATGTCAGGGAGACACCAGCAAGACAGCTAGCAGGCTCTGTCTGTTGGGTTTTCCAATCCATTGGGGTGTCCCAGATCTGCACCAGTGCCCGTTTGTGGTTGAGACCATTCCAGACCTAGACAACATTGATGTCACTCCTGAGAATGCTATGGATGTGGTGGAGATGATAGAGGGCCTGCTGAAAGACCATCCAGACCTCAACTGCACTGAACTGAGCACCATTCTGAAGAAACTCAAAAACATTGTTTTCATCAGCTGTATGACCCCACCTCTGGGCGAAGCTATCATCAACATCATCTCAGACATCTTGGAGTCTAAGAGCTACCTGCAGCATGTCACCAACCAAATACTGGACATTACGGAGATGGTTGGCGACAAGATGTCTTGTTTTGACCAGACAAATTATACTTTGGTTACTTCTGCGATGGCAATCTCCGTGGTGGACGTAGACCGGGGCCAGTTTCAGGTCCTCACTTTTGGCGTCTCGTCTGCTGCAGAGGGCCTAAACCCTGAGATTTATATCAACAAGGATCCGTTCAAAGGGACTGTTGCATTCATCTCCCTACCCTCAGCCTTGAAGTACAGATTTCCTCAACACAGTGGAGCCCAGCCGCGGGTTCAGTTTCAGTTTTATGGAGTCCCAACTCTCTTCATGAACAACCCGGATGGGAAGATCCTGAACACTTATGTGGTCTCAGCCAGTGTCACCAATGCCAGTGGCCCCATCAAGGAcctagaggaggatgtagaggtgaCACTACATCACTTGACGTCCAATCCACTTGGCAAGGAGGTGCAGTGTGTCTACTGGAACTTCAATCAAAATGaaggaaggggaggatggGAACAGCATGGATGCAGGAAGCACAACACCAGTGCTGACTATACCACATGCCTGTGTGACCACCTCACTCATTTTGGAGTACTTCTGGATGTATCCAGGACTCAAATCGACATACCAAATGAGGAAATTCTGACCATCATCACTCATCTGGGCTGCGGTGTGTCCTCCGTCTTCCTGGGAATCACTGTGTTGACATACACAGCATTTGAGAAGCTCCGCAGAGACTACCCATCCAAGATCCTCATTAACTTGTCTCTGGCGCTGCTGGGGCTCAACATGGTTTTCCTGGTCAACTCCTGGCTCTCCTCCTTTGGCAGCTATGGGCTTTGTGTGGCGGTGGCTTCCGCACTGCACTATTTCCTACTGGCCTCTTTCACTTGGATGGGCCTGGAGGCTGTGCACATGTACTTTGCCTTGGTCAAAGTCTTCAATGTTTATGTGCCCTCATACATCCTCAAGTTCTGCTCCCTAGGATGGGGAATCCCTCTGACCATATGCTGCGTAGTTCTGGTTGTGAAGAGAGAGTCCTACGGCAGCTCCCTCGGCAGTGAGTCCATGGAACCACTAGATAACTCCGAGGCGTTCTGCTGGATCCAGGATGAAGTGGCTTTCTATGTGTCTGTGGTGGGCTACATTCTGCTAGTGATGCTGTGCAACATGGCTATCTTCGTGGTGGTCCTGGTCCAGATCCGCCACATGCGGGTCAATCAGCCGGCTGGCATCCACAGCGGCCTCCTTCTGCAGGACCTGAAGGGGGTTTCCAGTCTCACCTTCCTGCTGGGTCTCACCTGGACTGTGGCTTTCTTCGCCTGGGGGCCAGCCAAGGttcccttcctctacctcttctGTGTCCTCAACAGTCTGCAAGGGTTCTTTATATTTCTGTTCCATTGTCTGATGAAGGAGAATGTGAGAAAACAATGGAGAATCCATTTGTGCTTTGGCCGCTTCAGACTCCAAGACTACTCTGAGTGGAGCCAGACTTTTACAGTTGGTGCGAAATCCAGACCTAACCTTCTGGTGCGCATGCCCTCAGTGAGGTCCATCAAGTCCAGTGCCACAGAAAGCACCTCGGCCTCCTCCGACTCCAGTCAACGACAGGTCTCCATCAGAAGACCTAACTTGGACCTTGTGTATGAGAATAACTTGACACTACCACTTGTCCAACGCAACTCCACTCCTCTACCTCACAAGAGTGCCTCTTTCCCAGAGGAGGGGCACTGCGAGGGGCCCTCTTGGCAAGACGGATCTCACCCAAGACACCGGCTACCCATTCCTTAAGACCTTTGAAATACGGCAAGGAGGAACACCTTCATTTGTGTTAAATGAATGAATAGAGAAACAAAGATTGTAACTTGTGCAATCTGAGATATCAGACCAGGCTTGGTTCTGTGTAACAAGGCAGCTTTCGCTTTGACCTCAATCTGGGACATGAATGCACATGTCTGATAAAGCAACATTTAGGACACAATATGAATGGTGTTTTTCATTTCTACTTTGGAGCAAATTAAAAATGAAGTTCTTTGTGATGATCTATCTGATGAATGATGTCCTGTCCATCTTCACTGATCTATTTATTGTACTGAAGGTGTGACAAATTAGACTAGTATGCATGTGTGCAAAACAGACAATAAATGACATTGGCTGCAATCTTTTTTTAATATTAATATTTGTGTATCAAAGTTTTATGCGAGATGAAAAATACCAGTATG

Function


NR:

description
PREDICTED: adhesion G-protein coupled receptor G4-like

GO: NA

KEGG:

id description
K08455 ADGRG4, GPR112; adhesion G-protein coupled receptor G4

RNA


RNA id representative length rna type GC content exon number start site end site
XM_036933249.1 True 2810 mRNA 0.49 15 48247145 48255449

Neighbor


gene id symbol gene type direction distance location
htatsf1 LOC100135780 coding downstream 13729 48225726 ~ 48233416 (-)
LOC110534147 LOC106602966 coding downstream 34071 48206906 ~ 48213074 (-)
f9b f9 coding downstream 83297 48158538 ~ 48163848 (-)
LOC110533132 LOC106603010 coding downstream 123617 48121001 ~ 48123528 (-)
LOC110534140 LOC106602970 coding downstream 133782 48108673 ~ 48113363 (-)
LOC118936699 LOC106602963 coding upstream 4877 48260326 ~ 48262871 (-)
fhl1b fhl1 coding upstream 7862 48263311 ~ 48284060 (-)
LOC118936700 LOC106602960 coding upstream 74994 48330443 ~ 48333177 (-)
LOC110534153 LOC106602956 coding upstream 99592 48355041 ~ 48387060 (-)
LOC110533134 NA coding upstream 160068 48415517 ~ 48432744 (-)
G897011 NA non-coding downstream 10731 48236099 ~ 48236414 (-)
G897008 NA non-coding downstream 22428 48224293 ~ 48224717 (-)
G897007 NA non-coding downstream 22934 48223794 ~ 48224211 (-)
G897005 NA non-coding downstream 24891 48221930 ~ 48222254 (-)
G896998 NA non-coding downstream 33150 48213789 ~ 48213995 (-)
G897044 NA non-coding upstream 67399 48322848 ~ 48323060 (-)
G897071 NA non-coding upstream 135022 48390471 ~ 48390695 (-)
G897091 NA non-coding upstream 155523 48410972 ~ 48413196 (-)
G897425 LOC106602952 non-coding upstream 243387 48498836 ~ 48501408 (-)
LOC110534161 LOC106602951 non-coding upstream 246213 48501662 ~ 48508644 (-)
G896841 NA other downstream 258069 47987761 ~ 47989076 (-)
LOC110534118 LOC106603020 other downstream 1014099 47203241 ~ 47234608 (-)
G894917 NA other downstream 2328806 45917279 ~ 45918339 (-)
LOC110534046 LOC107567170 other downstream 2496814 45747090 ~ 45751405 (-)
LOC110534025 LOC106603111 other downstream 3231098 45011329 ~ 45017446 (-)
LOC110534172 LOC106602940 other upstream 626278 48881449 ~ 48907973 (-)
G899409 NA other upstream 1900743 50156192 ~ 50156902 (-)
G899421 NA other upstream 1926947 50182396 ~ 50182788 (-)
LOC110534220 LOC106602898 other upstream 2210018 50463950 ~ 50482534 (-)
G899727 NA other upstream 2465537 50720986 ~ 50721603 (-)

Expression



Co-expression Network