LOC110534182 (LOC106602929)


Basic Information

Item Value
gene id LOC110534182
gene name LOC106602929
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 49243156 ~ 49275989 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021618900.2
CTGAGCGCAGTACAAAGAGAGCGAAACGAAAGGCAGCAGCAGTGAAACAAACAGCATCCCTCCAGCACAGATAAAGAGATAGAGAcgcaggatagagagagaaagagatcagcAAGACGGACGGAGAAGACTCCCGAGAGTTCCCGGGACGGGGCTTgcacagagagtcagacagagaaagaaagatattTTGAATCCTCTTGGCATGTGAGTGTGTCCCTTGACGCTTGGCGCTGTGTGCAGTTGTAACGAGTGTGTGCGGGGAAGAGTTGTCCTGGCGACATCAGGACATTTTGGTACGGGAATGTGGTGCAGCTAAGCCAGGTCGGCCAGGAAGGAAGGAACACCTATCAGCATGCTGGGGAAGGATTACATGCTCGCCATCATCATAGTCAATTATGACGACAACATCTGGAACGACCCGAGTCTTGATCTGGACACTGACCTGCCGTCAGGGTGGCGCACCATCCGGGACAGCACTGGCACCTACTACTGGCACGTGCCTACAGGCACCACACAATGGCAGCACCCATCCTACAGCAATGAGGAGGACCAGAGCGCCGTCAATGGCGTCACTGCCACGGACCTCAAGAGCCTGGAGGCTGGTGGCAGACGTGGCTCAAGGGCAAGGCTGACAGAGAGCCCAGTGGCCTCCGTAAATGACAGGATCTCCTGGCAGGACGATTATTTCTGCACCAACATGGATCCTGACTCCAAGTGTTTTGCGGTGCGCTCACTGGGCTGGGTGGAGATCCCAGAGGAGGAGCTGACCCCGGGGAAGAGCAGTCTGGCTGTCAATAACTGCATCCAGCAGCTGTCCAGCAGCAAGGCTGAGGGCCGCGATGCACTAGGCGCCTGGGGAGAGGGCCAGGACATGATGATGGTGCTGAAGAAGGACACCCTTAGCCTGATGGACCCAGTGGACCGCAGCCTTATCCACTGCCAACCTATCATCAACATCCGTGTGTGGGGCGTGGGATGCAACAACGGCAGAGACAGAGACTTTGCCTTTGTGGCCAGTGACAAAGACACCTGTATGCTGAAGTGCCATGTGTTTCGCTGCAGCGCCCCAGCAAAAACCATCGCCACGGCTTTGCATGAAATGTGCTCAAAGATCATGGCAGAGAAGACGACTAGAAGCCCATCTATGGCCCGCTCCCTCACAATGGAGAACATCTCCCCTGAGGACCTGCCACGTCAAGTGGACTTCCTGGATGCAATGAGGAAAAGGGTGCAGAAGTTTGAGGTGCAGTACATCGGAAACCTGCCTGTCTCCAGGGCGATGGGTATGGAGGTGCTGAACCGGGCCATAGAGAGCATCATGAACACCTCAGACAGTGACGAGTGGGAGCCCATCGTCATCCACATCTCCGACACTGTGCTTTCACTctggaaaggagagGATGGAGATGATCCCTTCTGGGAATGTCAAGTGCGTTACCTGACCTTTCTGGGTGTGGGCCATGACACACACACCTTTGCGGTGATAGTGGACTGCGGGACGCAGCGGTTTGAATGTCATGTTTTCTGGTGTGAGCCGGACGCAGGGATCATCTCTGAGGCTGTGCAGGCTGCGTGCATGGTCCAGTACCAGAAGTGCTTGGTGGCCCAGACTCCACCACCCAGGTCCAAAATGTGGCAGGCGGGTTCCAAGGTGAAGAGGGCCAACTCCATGGACGGCTTCACTTTCCCAGCTCCCCTTCACCAAGGACTGTCCCCACCCATGACTGGCTCCTCCACAGCCAAAAAGGGCATGCTGGCGTTTTTTGAGACTTTCAGAAATAAACAGTCAGCAGTTTCCACACCATAACAaccagatagagagggaggcgGGAGGGAGCAAGTGAGAGAAGGGGACTTGGGTAAAGGGAGGTACGGCAAATCAGTTTTAGGGCGAAGGGTAGAATGTATAACAGATGTATAACCAGCCATTAGAATGTGAAGATTGAAGGCCAGCTGAGTTTCTATTTGACCAGGCAAGGATGACCATTATCTTAAACAAAACAAACTTTTTCTGCATTTCTGCTTCTACTGTGTTTCTTTGGGTATACGACATATCTCAACTAGACTGGTTTGTGGTACAGATTTAGAAAAGAACACTGAGGTGCTGTACTCTCACATTCCACACCTTTCTTATCAAGGAAGAGTTTAAGTCATTAGGATCTTGACTTGTGCTTTTATTGCAAAATACCATCAAATACACAACAATGGCTCCCTGGTTCTAGGTGAAACATACAGTAGCAAAAAAATATGGTGCAGTAATTGACTACTCTTTAATATAGTTATCTGATATTGAACATCAGCAAAATGTAACAGTGACCTCATTCTTGTACAATCAATGTAGCTGGGTAGGTTGTGTTAAATACGTATACTGTTCTTTTTAATAAATGTAAAGGAATCTTTAACTTCAGATATATTCATAGAAGTGTGTCAACTTATAGCCTATAGTCCCTCTGACAGTTGACAACAAATAGATTTAAAATGTGAGATTAGGCATCATAAAGATGGGAGAGAAGATATCACACTCTACATTCCTCCATTATTCAAATTAGACGTGGCAAAATCGAGAATCAGACCTACGAACATCCTAGACCCCAGTTTGTCAACAGCAAATGAAGTCCAATCAGATCTGGGCTTTGGTACAATTTTGACGCAGCATACTCAGAAAGAATCCCTTTGAGCAGGATTCAGGAGTGGCACCAGTGCCACAGTGGTCTTCACATTAGAGTGAAGGAGAAGGTGTTTTATTTCTGTTCTGGAAAAGGTTTGTGTTAGTACAAGCAGCACAAAAGGCATAAAAGTGTAAAAAGGCATAAAGGCATAAAAGTGTAAAAATAAAGATTTAGAAAGGTATGTAGACAGTCCCCCGAAGCGCTACAGAAGCACTGCATGCTTTCGCACATGCCTGGGAATGAAATGCTTTGCTCAGGTACTTTCCATGCTATTGGcaatgaaaaaaaaagaaagaccgACTCTCACTAGTAAAACTGAAAACACTTAGAAATCAAGTCAATGACTAAACTCTAAATGCAAACAGTCCCCACCACTGAACGCCTGTGTTGTGTTGCTCCTATTGGAGGACACGCTAAACAGCATTTTCACTTGAGAAAACACCAAAACACactgaatcccccccaaaataCAGACTTACTTGCACTGCATTGAATTAagtatggggggaggggggaaaggcaCTTGGTTTATTGCATGCTGATTTTCAAAGTAATTTGCGACAGTAGGCCCACTGTATGCTGTGAAACACTTGGGCACATAAAAGGAATGGCACTTCAGAGAGGTCATACTATATATTACCGATATGCAACAGCTCCCCTCCCCCATTCTAAATAGGCATTATATGAGAAAACAACTCAGGTCTTCATATTTAGTGGAAGGTTCATGTCAAAGTTGGAAGAATGAAAAGGTGGAGCTTTGGCGTAAAATAACATGGGTGGAGAAGTGAAATACGTTTAATCCAGGAGAATTTGGGAGAGGTGATGTCATAAAAATGCTAATGTAGCACcttgagattttttttgtttctgcTATTTATACTACTAGTAAATAcatatgtctctctctatatatatatatttgcaataTTTTAGCACAAAAGAAAATAGGATGTCATGTAAATGCAAACTATTTTAAATTGTGATTATTTCTCGCAGTTGTACCTTACTTGGTCCACACTGTGGTGGTCTATGCTGGAATAATAAATTGCTTGGAAATCCTG
>XM_021618901.2
GCTGAGCGCAGTACAAAGAGAGCGAAACGAAAGGCAGCAGCAGTGAAACAAACAGCATCCCTCCAGCACAGATAAAGAGATAGAGAcgcaggatagagagagaaagagatcagcAAGACGGACGGAGAAGACTCCCGAGAGTTCCCGGGACGGGGCTTgcacagagagtcagacagagaaagaaagatattTTGAATCCTCTTGGCATGTGAGTGTGTCCCTTGACGCTTGGCGCTGTGTGCAGTTGTAACGAGTGTGTGCGGGGAAGAGTTGTCCTGGCGACATCAGGACATTTTGGTACGGGAATGTGGTGCAGCTAAGCCAGGTCGGCCAGGAAGGAAGGAACACCTATCAGCATGCTGGGGAAGGATTACATGCTCGCCATCATCATAGTCAATTATGACGACAACATCTGGAACGACCCGAGTCTTGATCTGGACACTGACCTGCCGTCAGGGTGGCGCACCATCCGGGACAGCACTGGCACCTACTACTGGCACGTGCCTACAGGCACCACACAATGGCAGCACCCATCCTACAGCAATGAGGAGGACCAGAGCGCCGTCAATGGCGTCACTGCCACGGACCTCAAGAGCCTGGAGGCTGGTGGCAGACGTGGCTCAAGGGCAAGGCTGACAGAGAGCCCAGTGGCCTCCGTAAATGACAGGATCTCCTGGCAGGACGATTATTTCTGCACCAACATGGATCCTGACTCCAAGTGTTTTGCGGTGCGCTCACTGGGCTGGGTGGAGATCCCAGAGGAGGAGCTGACCCCGGGGAAGAGCAGTCTGGCTGTCAATAACTGCATCCAGCAGCTGTCCAGCAGCAAGGCTGAGGGCCGCGATGCACTAGGCGCCTGGGGAGAGGGCCAGGACATGATGATGGTGCTGAAGAAGGACACCCTTAGCCTGATGGACCCAGTGGACCGCAGCCTTATCCACTGCCAACCTATCATCAACATCCGTGTGTGGGGCGTGGGATGCAACAACGGCAGAGACTTTGCCTTTGTGGCCAGTGACAAAGACACCTGTATGCTGAAGTGCCATGTGTTTCGCTGCAGCGCCCCAGCAAAAACCATCGCCACGGCTTTGCATGAAATGTGCTCAAAGATCATGGCAGAGAAGACGACTAGAAGCCCATCTATGGCCCGCTCCCTCACAATGGAGAACATCTCCCCTGAGGACCTGCCACGTCAAGTGGACTTCCTGGATGCAATGAGGAAAAGGGTGCAGAAGTTTGAGGTGCAGTACATCGGAAACCTGCCTGTCTCCAGGGCGATGGGTATGGAGGTGCTGAACCGGGCCATAGAGAGCATCATGAACACCTCAGACAGTGACGAGTGGGAGCCCATCGTCATCCACATCTCCGACACTGTGCTTTCACTctggaaaggagagGATGGAGATGATCCCTTCTGGGAATGTCAAGTGCGTTACCTGACCTTTCTGGGTGTGGGCCATGACACACACACCTTTGCGGTGATAGTGGACTGCGGGACGCAGCGGTTTGAATGTCATGTTTTCTGGTGTGAGCCGGACGCAGGGATCATCTCTGAGGCTGTGCAGGCTGCGTGCATGGTCCAGTACCAGAAGTGCTTGGTGGCCCAGACTCCACCACCCAGGTCCAAAATGTGGCAGGCGGGTTCCAAGGTGAAGAGGGCCAACTCCATGGACGGCTTCACTTTCCCAGCTCCCCTTCACCAAGGACTGTCCCCACCCATGACTGGCTCCTCCACAGCCAAAAAGGGCATGCTGGCGTTTTTTGAGACTTTCAGAAATAAACAGTCAGCAGTTTCCACACCATAACAaccagatagagagggaggcgGGAGGGAGCAAGTGAGAGAAGGGGACTTGGGTAAAGGGAGGTACGGCAAATCAGTTTTAGGGCGAAGGGTAGAATGTATAACAGATGTATAACCAGCCATTAGAATGTGAAGATTGAAGGCCAGCTGAGTTTCTATTTGACCAGGCAAGGATGACCATTATCTTAAACAAAACAAACTTTTTCTGCATTTCTGCTTCTACTGTGTTTCTTTGGGTATACGACATATCTCAACTAGACTGGTTTGTGGTACAGATTTAGAAAAGAACACTGAGGTGCTGTACTCTCACATTCCACACCTTTCTTATCAAGGAAGAGTTTAAGTCATTAGGATCTTGACTTGTGCTTTTATTGCAAAATACCATCAAATACACAACAATGGCTCCCTGGTTCTAGGTGAAACATACAGTAGCAAAAAAATATGGTGCAGTAATTGACTACTCTTTAATATAGTTATCTGATATTGAACATCAGCAAAATGTAACAGTGACCTCATTCTTGTACAATCAATGTAGCTGGGTAGGTTGTGTTAAATACGTATACTGTTCTTTTTAATAAATGTAAAGGAATCTTTAACTTCAGATATATTCATAGAAGTGTGTCAACTTATAGCCTATAGTCCCTCTGACAGTTGACAACAAATAGATTTAAAATGTGAGATTAGGCATCATAAAGATGGGAGAGAAGATATCACACTCTACATTCCTCCATTATTCAAATTAGACGTGGCAAAATCGAGAATCAGACCTACGAACATCCTAGACCCCAGTTTGTCAACAGCAAATGAAGTCCAATCAGATCTGGGCTTTGGTACAATTTTGACGCAGCATACTCAGAAAGAATCCCTTTGAGCAGGATTCAGGAGTGGCACCAGTGCCACAGTGGTCTTCACATTAGAGTGAAGGAGAAGGTGTTTTATTTCTGTTCTGGAAAAGGTTTGTGTTAGTACAAGCAGCACAAAAGGCATAAAAGTGTAAAAAGGCATAAAGGCATAAAAGTGTAAAAATAAAGATTTAGAAAGGTATGTAGACAGTCCCCCGAAGCGCTACAGAAGCACTGCATGCTTTCGCACATGCCTGGGAATGAAATGCTTTGCTCAGGTACTTTCCATGCTATTGGcaatgaaaaaaaaagaaagaccgACTCTCACTAGTAAAACTGAAAACACTTAGAAATCAAGTCAATGACTAAACTCTAAATGCAAACAGTCCCCACCACTGAACGCCTGTGTTGTGTTGCTCCTATTGGAGGACACGCTAAACAGCATTTTCACTTGAGAAAACACCAAAACACactgaatcccccccaaaataCAGACTTACTTGCACTGCATTGAATTAagtatggggggaggggggaaaggcaCTTGGTTTATTGCATGCTGATTTTCAAAGTAATTTGCGACAGTAGGCCCACTGTATGCTGTGAAACACTTGGGCACATAAAAGGAATGGCACTTCAGAGAGGTCATACTATATATTACCGATATGCAACAGCTCCCCTCCCCCATTCTAAATAGGCATTATATGAGAAAACAACTCAGGTCTTCATATTTAGTGGAAGGTTCATGTCAAAGTTGGAAGAATGAAAAGGTGGAGCTTTGGCGTAAAATAACATGGGTGGAGAAGTGAAATACGTTTAATCCAGGAGAATTTGGGAGAGGTGATGTCATAAAAATGCTAATGTAGCACcttgagattttttttgtttctgcTATTTATACTACTAGTAAATAcatatgtctctctctatatatatatatttgcaataTTTTAGCACAAAAGAAAATAGGATGTCATGTAAATGCAAACTATTTTAAATTGTGATTATTTCTCGCAGTTGTACCTTACTTGGTCCACACTGTGGTGGTCTATGCTGGAATAATAAATTGCTTGGAAATCCTG

Function

NR:

description
amyloid beta A4 precursor protein-binding family B member 3-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021618900.2 False 3733 mRNA 0.47 13 49243156 49275988
XM_021618901.2 True 3728 mRNA 0.47 12 49243156 49275989

Neighbor

gene id symbol gene type direction distance location
LOC110534181 LOC106602931 coding downstream 194 49141750 ~ 49242962 (-)
LOC110534172 LOC106602940 coding downstream 335183 48881449 ~ 48907973 (-)
LOC110534171 LOC106602941 coding downstream 365279 48854852 ~ 48877877 (-)
dacha dach2 coding downstream 447836 48666706 ~ 48795320 (-)
alg13 LOC106602945 coding downstream 608554 48626002 ~ 48634602 (-)
LOC110534186 LOC100194652 coding upstream 26428 49302417 ~ 49309197 (-)
LOC110534187 NA coding upstream 37421 49313410 ~ 49318075 (-)
LOC110534188 LOC106602927 coding upstream 42609 49318598 ~ 49425142 (-)
LOC110533138 NA coding upstream 162055 49438004 ~ 49443736 (-)
LOC110534927 LOC106603007 coding upstream 267300 49543289 ~ 49544975 (-)
G898045 NA non-coding downstream 58318 49184435 ~ 49184838 (-)
G898077 LOC100380851 non-coding downstream 68239 49173319 ~ 49174917 (-)
G898061 NA non-coding downstream 83794 49159141 ~ 49159362 (-)
G898051 NA non-coding downstream 93529 49149408 ~ 49149627 (-)
G898032 NA non-coding downstream 121282 49121485 ~ 49121874 (-)
G898107 NA non-coding upstream 244 49276233 ~ 49276463 (-)
G898114 NA non-coding upstream 6025 49282014 ~ 49283140 (-)
G898118 NA non-coding upstream 11742 49287731 ~ 49287964 (-)
G898119 NA non-coding upstream 12969 49288958 ~ 49289477 (-)
G898122 NA non-coding upstream 16581 49292570 ~ 49292890 (-)
G896841 NA other downstream 1254080 47987761 ~ 47989076 (-)
LOC110534118 LOC106603020 other downstream 2010110 47203241 ~ 47234608 (-)
G894917 NA other downstream 3324817 45917279 ~ 45918339 (-)
LOC110534046 LOC107567170 other downstream 3492825 45747090 ~ 45751405 (-)
G899409 NA other upstream 880203 50156192 ~ 50156902 (-)
G899421 NA other upstream 906407 50182396 ~ 50182788 (-)
LOC110534220 LOC106602898 other upstream 1189478 50463950 ~ 50482534 (-)
G899727 NA other upstream 1444997 50720986 ~ 50721603 (-)
G899739 LOC106602890 other upstream 1467169 50743158 ~ 50750233 (-)

Expression


Co-expression Network