LOC110534196 (LOC106602919)


Basic Information

Item Value
gene id LOC110534196
gene name LOC106602919
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 49745087 ~ 49753067 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021618914.2
CCTGCAGCACGCCCTGAAAAATCTGAAAAGAATACAAACAAATCATAGCCAGACATTCAGAGGTCGACACAGCAAGTtcaggagagaaagagtgagaacgAGGCGCTCGAACACTGGTTGCGACACTGTGTCCCAGTTAACAGCTTCACAGGGCTGTGCTCCTTTGCATCTCCCACAATGCTTTGTCAGCAGGCCTTACCGTCCGAGAGTGAGCCAGATAATAAACCCAGCCTATTGTAGGGGTCATTACCTCTATTCAGCACTACACACACGGTCCAGTCCAATCTTTTGTCAGGTTGGATTAATCTGAACAATAACCCATTGTGAGCCATAACAGAGACAGCCTTCTGCAACAATGTCCAGGTCAGGAGATATACCAGCCCTGGAGTCTGGGACCCCAGAGGGGCTCCTGGGAGGCATGTCCCTGCCCGTTGGCATGACCCGCCGTGCCATGAGCTATGATGACAACATGGAGGCGCCCATGTCGCCCCCTCCCTctgacatcaacatcaacaaccTATGGGGGAGGAGGCCCGTGGTACCAGACAGGAGGTTCAGTCTTCTGGCTGAGGAGGATGAATCTGGAAATGCCCTGACCCATGCTGCCACGTTTGACGCTGGTCTCAGGCCACATATGCCAGTAGTGGTGAAAGCCAAAGCCTCCTCCATCATTATGAACTCTCTGATGACCAAGCAAACCCAGGACAGCATGTACAGGTTTGAGCAGCAGGCTGGGCTGAGAGACACTGTCTACACGCCCCACAAGGGCCTCACTTCCGAGGAGACCCGCCACCACCATCGCATGCCAGAGTCATTCCATAAAATGAATATTCAAAGTATGGACATGGGAGCAGGACATAAGGGAGGACACGAGGACAAGCAAACATCATCTGCTCAGTCCACCCCAAATAGCACTCCTCAGAGCTCACCCAAACAGAAACGCAGGGGCTGGTTCACCAGCCAGAGCACAACGGTCACTAGCTCAGACCTCAGTACCAGCTCTAATATGAGTGTGGACATGGGTGCTGATGAGGGGGGAGGAGCAGTCGAACGCTGGGGTGTCTTTGGACCACGTCCTGTGGTCCAGAAATCCACTACCGACACCGGTGCGGACCACACAAACACAGGGGGTTTTGCTCTCCAGTCTTACCGCGGGGCCCAGAAGCCCACCCCCATGGAGGTGATGAAGGCACAGGCCACTCGGTTGGCTGATGACCCTGCTGTCGACAAACAGGCCCCACCCAAGATGGAGATCCCCACCATGGAGGGCAGTAGACGGTCAGCCCGGCCGCACAAACTCAAACCTCGAGACATGAACATCCTCACTCCCTCAGGCTTCTGAGAGGTACCATGTCGTCACTACTCCCTAATGTTCTACTCGGTCAAGTTGTTGTAGCTGGTCTACCCTCTTTCCTTTCCTGACTTTCCTGATCTGAAATGAGGTCCCTTTAATGTATGTGACTGAATCTGAGAATCTTTACCATTTCCAAAAAGAAAAGCATCCTGTTGTGTTTGATACTATCGTATTTGGTTTTGAAGTTTTCCTCTCTTGCACTAAAAGTCGTTTATTTTTGTTTCTATTTGTGTGATAAGGTTATTGTGCCATGTTGATTTTGTTTTGCATCATCCTTTGTCTTGTAAAGGAACTGTGTATTTTGACTTTGTATTTATGGTCCAACTGTGAAAACGTTCTGATACATGACAGTGTGCAAATAGTTACTCTCACACTGTTTGATAAAATAAAAAACGGCCACACTGTGTAGTGGTTTGCTCATTCTGTTTGCTTGTGAATCTCATTCAACCTGAAGTACCACTAGCTTTTCATTGTCTGCAGATTTATATGCCGATAAGATGTAATGATTCTCATTGTCATGTCTCCCAAGAACTTTGTGGTGATTATTGTTCACCCTCGATGAAGTGTGGTTATTGTGCATCCGCATTCTTCCTGTCAAGACGACCCTTTTGAAGTTAAAACGCTGTTAGTAAAACACTGCAGTAGAATattaatatgacatgttacataTTTACCAGTGAAGTATGTAATGATTTGACCAACCCTGTTCAGGtgtttttctatttattttacaTGGCTGtccatatgtatgtatgtcttcTGTGGACTTTGTTGTAAATATCTGAATAAAAAATAATTCTAACATTCAACAAAATCTGGTTCCATCAACCATCCAGAAACAGTGGACAGTGGAAACAGTGGAAATATGGTCAGCGCTGCACAGGTTAAAGAACCCGGTGGTGAAGGATGGGTTTTCCATTGTGATTTAGAAATTGAAGTAGTTGTACATTTCATAAGGCAAGATCAGCTACCACTGATTGATAGCCATAGAAAACTGCTATTTCACACTGTGAAGTGATCGTCAATAATTCAGCAGGAATACTAATGATTACCAGTAGATGGCATCAGCTCCTTTGTAACACAGTCTCTGAATTGGCTGGATAACTCTCATGGAATGCAACGCTGGGATTTCATTTAATCTGTCTCACcgatatgtgatatttcagttttttatttgtaataaatgtgccaAAAATGTTtga
>XM_021618915.2
GACTTTTATTTGCAGTATGATCACGTGGCCGAGGTTCACAACGCTCGGACTTTCCTCATCACATTGGGAGCTGGGTATTATCATGGGCGAGATGTTTCTCAGTTGTTCTGAAACCTTTCCCGTTGACATTGTAACGTTACGACCGTCTTCATCGTCTACGTGTCTGTTTTAAGCGACGTGGGAGGCGTTAAATCTGCTTCACAGGGCTGTGCTCCTTTGCATCTCCCACAATGCTTTGTCAGCAGGCCTTACCGTCCGAGAGTGAGCCAGATAATAAACCCAGCCTATTGTAGGGGTCATTACCTCTATTCAGCACTACACACACGGTTGGATTAATCTGAACAATAACCCATTGTGAGCCATAACAGAGACAGCCTTCTGCAACAATGTCCAGGTCAGGAGATATACCAGCCCTGGAGTCTGGGACCCCAGAGGGGCTCCTGGGAGGCATGTCCCTGCCCGTTGGCATGACCCGCCGTGCCATGAGCTATGATGACAACATGGAGGCGCCCATGTCGCCCCCTCCCTctgacatcaacatcaacaaccTATGGGGGAGGAGGCCCGTGGTACCAGACAGGAGGTTCAGTCTTCTGGCTGAGGAGGATGAATCTGGAAATGCCCTGACCCATGCTGCCACGTTTGACGCTGGTCTCAGGCCACATATGCCAGTAGTGGTGAAAGCCAAAGCCTCCTCCATCATTATGAACTCTCTGATGACCAAGCAAACCCAGGACAGCATGTACAGGTTTGAGCAGCAGGCTGGGCTGAGAGACACTGTCTACACGCCCCACAAGGGCCTCACTTCCGAGGAGACCCGCCACCACCATCGCATGCCAGAGTCATTCCATAAAATGAATATTCAAAGTATGGACATGGGAGCAGGACATAAGGGAGGACACGAGGACAAGCAAACATCATCTGCTCAGTCCACCCCAAATAGCACTCCTCAGAGCTCACCCAAACAGAAACGCAGGGGCTGGTTCACCAGCCAGAGCACAACGGTCACTAGCTCAGACCTCAGTACCAGCTCTAATATGAGTGTGGACATGGGTGCTGATGAGGGGGGAGGAGCAGTCGAACGCTGGGGTGTCTTTGGACCACGTCCTGTGGTCCAGAAATCCACTACCGACACCGGTGCGGACCACACAAACACAGGGGGTTTTGCTCTCCAGTCTTACCGCGGGGCCCAGAAGCCCACCCCCATGGAGGTGATGAAGGCACAGGCCACTCGGTTGGCTGATGACCCTGCTGTCGACAAACAGGCCCCACCCAAGATGGAGATCCCCACCATGGAGGGCAGTAGACGGTCAGCCCGGCCGCACAAACTCAAACCTCGAGACATGAACATCCTCACTCCCTCAGGCTTCTGAGAGGTACCATGTCGTCACTACTCCCTAATGTTCTACTCGGTCAAGTTGTTGTAGCTGGTCTACCCTCTTTCCTTTCCTGACTTTCCTGATCTGAAATGAGGTCCCTTTAATGTATGTGACTGAATCTGAGAATCTTTACCATTTCCAAAAAGAAAAGCATCCTGTTGTGTTTGATACTATCGTATTTGGTTTTGAAGTTTTCCTCTCTTGCACTAAAAGTCGTTTATTTTTGTTTCTATTTGTGTGATAAGGTTATTGTGCCATGTTGATTTTGTTTTGCATCATCCTTTGTCTTGTAAAGGAACTGTGTATTTTGACTTTGTATTTATGGTCCAACTGTGAAAACGTTCTGATACATGACAGTGTGCAAATAGTTACTCTCACACTGTTTGATAAAATAAAAAACGGCCACACTGTGTAGTGGTTTGCTCATTCTGTTTGCTTGTGAATCTCATTCAACCTGAAGTACCACTAGCTTTTCATTGTCTGCAGATTTATATGCCGATAAGATGTAATGATTCTCATTGTCATGTCTCCCAAGAACTTTGTGGTGATTATTGTTCACCCTCGATGAAGTGTGGTTATTGTGCATCCGCATTCTTCCTGTCAAGACGACCCTTTTGAAGTTAAAACGCTGTTAGTAAAACACTGCAGTAGAATattaatatgacatgttacataTTTACCAGTGAAGTATGTAATGATTTGACCAACCCTGTTCAGGtgtttttctatttattttacaTGGCTGtccatatgtatgtatgtcttcTGTGGACTTTGTTGTAAATATCTGAATAAAAAATAATTCTAACATTCAACAAAATCTGGTTCCATCAACCATCCAGAAACAGTGGACAGTGGAAACAGTGGAAATATGGTCAGCGCTGCACAGGTTAAAGAACCCGGTGGTGAAGGATGGGTTTTCCATTGTGATTTAGAAATTGAAGTAGTTGTACATTTCATAAGGCAAGATCAGCTACCACTGATTGATAGCCATAGAAAACTGCTATTTCACACTGTGAAGTGATCGTCAATAATTCAGCAGGAATACTAATGATTACCAGTAGATGGCATCAGCTCCTTTGTAACACAGTCTCTGAATTGGCTGGATAACTCTCATGGAATGCAACGCTGGGATTTCATTTAATCTGTCTCACcgatatgtgatatttcagttttttatttgtaataaatgtgccaAAAATGTTtga
>XM_021618913.2
CTTTTATTTGCAGTATGATCACGTGGCCGAGGTTCACAACGCTCGGACTTTCCTCATCACATTGGGAGCTGGGTATTATCATGGGCGAGATGTTTCTCAGTTGTTCTGAAACCTTTCCCGTTGACATTGTAACGTTACGACCGTCTTCATCGTCTACGTGTCTGTTTTAAGCGACGTGGGAGGCGTTAAATCTGCTTCACAGGGCTGTGCTCCTTTGCATCTCCCACAATGCTTTGTCAGCAGGCCTTACCGTCCGAGAGTGAGCCAGATAATAAACCCAGCCTATTGTAGGGGTCATTACCTCTATTCAGCACTACACACACGGTCCAGTCCAATCTTTTGTCAGGTTGGATTAATCTGAACAATAACCCATTGTGAGCCATAACAGAGACAGCCTTCTGCAACAATGTCCAGGTCAGGAGATATACCAGCCCTGGAGTCTGGGACCCCAGAGGGGCTCCTGGGAGGCATGTCCCTGCCCGTTGGCATGACCCGCCGTGCCATGAGCTATGATGACAACATGGAGGCGCCCATGTCGCCCCCTCCCTctgacatcaacatcaacaaccTATGGGGGAGGAGGCCCGTGGTACCAGACAGGAGGTTCAGTCTTCTGGCTGAGGAGGATGAATCTGGAAATGCCCTGACCCATGCTGCCACGTTTGACGCTGGTCTCAGGCCACATATGCCAGTAGTGGTGAAAGCCAAAGCCTCCTCCATCATTATGAACTCTCTGATGACCAAGCAAACCCAGGACAGCATGTACAGGTTTGAGCAGCAGGCTGGGCTGAGAGACACTGTCTACACGCCCCACAAGGGCCTCACTTCCGAGGAGACCCGCCACCACCATCGCATGCCAGAGTCATTCCATAAAATGAATATTCAAAGTATGGACATGGGAGCAGGACATAAGGGAGGACACGAGGACAAGCAAACATCATCTGCTCAGTCCACCCCAAATAGCACTCCTCAGAGCTCACCCAAACAGAAACGCAGGGGCTGGTTCACCAGCCAGAGCACAACGGTCACTAGCTCAGACCTCAGTACCAGCTCTAATATGAGTGTGGACATGGGTGCTGATGAGGGGGGAGGAGCAGTCGAACGCTGGGGTGTCTTTGGACCACGTCCTGTGGTCCAGAAATCCACTACCGACACCGGTGCGGACCACACAAACACAGGGGGTTTTGCTCTCCAGTCTTACCGCGGGGCCCAGAAGCCCACCCCCATGGAGGTGATGAAGGCACAGGCCACTCGGTTGGCTGATGACCCTGCTGTCGACAAACAGGCCCCACCCAAGATGGAGATCCCCACCATGGAGGGCAGTAGACGGTCAGCCCGGCCGCACAAACTCAAACCTCGAGACATGAACATCCTCACTCCCTCAGGCTTCTGAGAGGTACCATGTCGTCACTACTCCCTAATGTTCTACTCGGTCAAGTTGTTGTAGCTGGTCTACCCTCTTTCCTTTCCTGACTTTCCTGATCTGAAATGAGGTCCCTTTAATGTATGTGACTGAATCTGAGAATCTTTACCATTTCCAAAAAGAAAAGCATCCTGTTGTGTTTGATACTATCGTATTTGGTTTTGAAGTTTTCCTCTCTTGCACTAAAAGTCGTTTATTTTTGTTTCTATTTGTGTGATAAGGTTATTGTGCCATGTTGATTTTGTTTTGCATCATCCTTTGTCTTGTAAAGGAACTGTGTATTTTGACTTTGTATTTATGGTCCAACTGTGAAAACGTTCTGATACATGACAGTGTGCAAATAGTTACTCTCACACTGTTTGATAAAATAAAAAACGGCCACACTGTGTAGTGGTTTGCTCATTCTGTTTGCTTGTGAATCTCATTCAACCTGAAGTACCACTAGCTTTTCATTGTCTGCAGATTTATATGCCGATAAGATGTAATGATTCTCATTGTCATGTCTCCCAAGAACTTTGTGGTGATTATTGTTCACCCTCGATGAAGTGTGGTTATTGTGCATCCGCATTCTTCCTGTCAAGACGACCCTTTTGAAGTTAAAACGCTGTTAGTAAAACACTGCAGTAGAATattaatatgacatgttacataTTTACCAGTGAAGTATGTAATGATTTGACCAACCCTGTTCAGGtgtttttctatttattttacaTGGCTGtccatatgtatgtatgtcttcTGTGGACTTTGTTGTAAATATCTGAATAAAAAATAATTCTAACATTCAACAAAATCTGGTTCCATCAACCATCCAGAAACAGTGGACAGTGGAAACAGTGGAAATATGGTCAGCGCTGCACAGGTTAAAGAACCCGGTGGTGAAGGATGGGTTTTCCATTGTGATTTAGAAATTGAAGTAGTTGTACATTTCATAAGGCAAGATCAGCTACCACTGATTGATAGCCATAGAAAACTGCTATTTCACACTGTGAAGTGATCGTCAATAATTCAGCAGGAATACTAATGATTACCAGTAGATGGCATCAGCTCCTTTGTAACACAGTCTCTGAATTGGCTGGATAACTCTCATGGAATGCAACGCTGGGATTTCATTTAATCTGTCTCACcgatatgtgatatttcagttttttatttgtaataaatgtgccaAAAATGTTtga

Function

NR:

description
putative monooxygenase p33MONOX

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021618914.2 False 2556 mRNA 0.46 9 49745087 49753067
XM_021618915.2 False 2587 mRNA 0.46 9 49745574 49753067
XM_021618913.2 True 2607 mRNA 0.46 9 49745576 49753067

Neighbor

gene id symbol gene type direction distance location
LOC110534194 LOC106602920 coding upstream 14810 49725851 ~ 49730277 (+)
LOC110533139 LOC106602921 coding upstream 24517 49660880 ~ 49720570 (+)
cnot6a LOC106602922 coding upstream 126700 49605233 ~ 49618387 (+)
rgs14b LOC106602924 coding upstream 272558 49450868 ~ 49472529 (+)
LOC110534189 LOC106602925 coding upstream 313227 49426785 ~ 49432958 (+)
clk4b LOC106602917 coding downstream 47600 49800667 ~ 49810924 (+)
LOC110534200 LOC106602916 coding downstream 58362 49811429 ~ 49954007 (+)
LOC110534202 LOC106602915 coding downstream 215077 49968144 ~ 49989740 (+)
LOC110534204 LOC106602914 coding downstream 246578 49999645 ~ 50014637 (+)
LOC110534206 LOC106602913 coding downstream 326098 50079165 ~ 50080809 (+)
G898519 NA non-coding upstream 19664 49725125 ~ 49725423 (+)
G898368 NA non-coding upstream 165426 49579162 ~ 49579661 (+)
G898355 NA non-coding upstream 173775 49571065 ~ 49571312 (+)
G898353 NA non-coding upstream 175454 49569126 ~ 49569633 (+)
G898568 NA non-coding downstream 38007 49791074 ~ 49791304 (+)
G898571 NA non-coding downstream 39985 49793052 ~ 49793358 (+)
G898574 NA non-coding downstream 44915 49797982 ~ 49798281 (+)
G898583 NA non-coding downstream 63607 49816674 ~ 49816912 (+)
G898585 NA non-coding downstream 68063 49821130 ~ 49821647 (+)
LOC110534184 LOC106563731 other upstream 463135 49277626 ~ 49282746 (+)
G897244 dach2 other upstream 1068022 48676257 ~ 48677065 (+)
G896217 NA other upstream 1509471 48235182 ~ 48235616 (+)
G896043 NA other upstream 1834112 47909716 ~ 47910975 (+)
G898894 LOC106603005 other downstream 281923 50034990 ~ 50037685 (+)
G901849 LOC106602874 other downstream 2697151 52450218 ~ 52475365 (+)
LOC110534253 hinfp other downstream 2779661 52532434 ~ 52542498 (+)
G902707 NA other downstream 3763040 53516107 ~ 53519788 (+)
G902840 LOC106602714 other downstream 3917053 53670120 ~ 53674811 (+)

Expression


Co-expression Network