grk1b


Basic Information

Item Value
gene id grk1b
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 50319070 ~ 50326034 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036934581.1
ATGGATATGGGTGGTCTGCAAAACATTGTGGCCAACTCGGCCTATGTGTCAGCCCGTGGTAGTGTCGATGGCATGGCGGCGTCGACCATGCGTGACAAGAAGTTTCGTGCCAAGCTCAACCTTCCGCACATCAAGAAGAGCGAGCACATGAAGACCACGGTGAACTCCGGCTTCGACAGCATGTGTGTCAAGCAACCCATTGGCAAGCGGCTCTTCCAGCAGTACCTGGAGCGTGATGCAACCCACAAGAACGCCTGCAACCTCTGGAAGGACATCGATTTCAACATCACCCAGGAGAAGTACCGGGTGCAGAAGGCCCAGAAGATCATCAACAAGTTCTACGAATTCAAGTCCAAGATCTTTTGCAGCTTCCTGGAGGAGAAGGCTGTGACACGCGTCAAGGAGGACCACAAGAACATCCGCGGAGACCTGTTCAAGGAGAGTGAGCAGCAGCTTTTAAAGCACCTGGAGGCCAAGGCAATGTCCGGCTTTAAGAACAGTATGTACTTCCTGCGTTACATCCAGTTCAAGTGGTTGGAAGCCCAGCCCATTGATGAGGACTGGTTAATGGACTTCAGAGTGCTGGGGAAGGGAGGGTTTGGGGAGGTACACACCTGCCAGATGAAGGCCACAGGCAAGATGTATGCCAACAAAAAGCTGGACAAAGGAACATAAAGGCTGAAGAAACATAAAGGCTacgagGGAGCGATCGTGGAGAAACGTATTCTGGCGAAGGTGCACAGTCGTTTTATCGTATCGTTGGTGTATGCCTTCCAGACCAAGACTAACCTCTGCCTAGTTATGCCCATCATGAATGGAGGAGATCTCAggtactctgtatacaacGTGGACGAGAAGAACCCTGGTTTCGATGAGACGAGAGCTTGTTTCTACTCAGCCCAGATCATCGTGGGTATGGAGCATCTTCACCAGCACAGGGTCATCGACAGGGATCTGAAACCAGAGAATGTGCTGCTGGATGATGCAGGACATGTGCGTCTGTCTGATTTGGGTCTTGCTGTTGAGCTTCCGCCTGGAAAAGACAAAACCAGAGGATATGCAGGCACACCAGGCTTCATGGCTCCGGAGCTGATTGAGCATAAAGAGTAAGACTACACTGAGGGCTATTTTACCCTGGGGGGGGTCACCCTGTATGAGATGATCCAGGCCAAGGGCCCCTTCAGAACCAGAGGAGAGAAGGTAATAATGGAACTGTTGAAAACACGGCAAATCTTAAATGATGCAGTGGTGTTCACAGACAAGTTCAGCAAAGACGGCAAGGCTATCTGTGAAGGCCTGATGGAAAAAGATCCGGTAAAGCGTCTCGGCTTTAAGAACAACtccaatgcctcccacagttatgtcaagttggctggaaaccctttgggtgatggaccatttttgagcagcgttgcagttcttgacacaaaccggcgCATGCTGCCCACACCGTTCGTCCCAAACCCCAAGGCGGTGTATGCCAAAGACATCCACAAAGTGGGAGCCTTTAGCTCCATCAATGGGGTGGTCATCGATGCCAAGGACAATGAGTTCAATGACGACTTCTCTTCTGGCAACGTGCCCATCCCCTGGCAGGAGGAGATGATAGAGACAGGGGTGTTCGGAGAGCTCAACCTCTGGGCGCCAGGGGGCAATCCGCCTGACGACCTGGACCCCAACAAAATCCCTATAGAGTCCAAGGGAGGGGCCTGTGTGCTGCTCTGA

Function

NR:

description
PREDICTED: rhodopsin kinase

GO:

id name namespace
GO:0038032 termination of G protein-coupled receptor signaling pathway biological_process
GO:0006468 protein phosphorylation biological_process
GO:0005524 ATP binding molecular_function
GO:0050254 rhodopsin kinase activity molecular_function
GO:0004703 G protein-coupled receptor kinase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036934581.1 True 1725 mRNA 0.52 10 50319070 50326034

Neighbor

gene id symbol gene type direction distance location
LOC110534213 LOC106602908 coding downstream 58635 50246298 ~ 50260435 (-)
LOC110533140 LOC106563775 coding downstream 270138 50045056 ~ 50048932 (-)
LOC110534205 LOC106603005 coding downstream 281391 50035811 ~ 50037679 (-)
LOC110534197 LOC106602918 coding downstream 523484 49772382 ~ 49795586 (-)
LOC110534195 NA coding downstream 584414 49733006 ~ 49734656 (-)
slc25a35 slc25a35 coding upstream 15082 50341116 ~ 50353286 (-)
LOC118936704 NA coding upstream 20488 50346522 ~ 50349995 (-)
tp53 tp53 coding upstream 61914 50387948 ~ 50399688 (-)
LOC110534217 LOC106602903 coding upstream 74752 50400786 ~ 50442079 (-)
LOC110534218 LOC106602900 coding upstream 126419 50452453 ~ 50454285 (-)
G899434 NA non-coding downstream 121148 50197698 ~ 50197922 (-)
G899423 NA non-coding downstream 134055 50184810 ~ 50185015 (-)
G899422 NA non-coding downstream 134345 50184444 ~ 50184725 (-)
G899417 NA non-coding downstream 152356 50166471 ~ 50166714 (-)
G899524 NA non-coding upstream 5367 50331401 ~ 50351308 (-)
G899527 NA non-coding upstream 30306 50356340 ~ 50356801 (-)
G899533 NA non-coding upstream 38529 50364563 ~ 50364817 (-)
LOC110534220 LOC106602898 non-coding upstream 139433 50463950 ~ 50482534 (-)
G899616 NA non-coding upstream 179606 50505640 ~ 50505849 (-)
G899421 NA other downstream 136282 50182396 ~ 50182788 (-)
G899409 NA other downstream 162168 50156192 ~ 50156902 (-)
LOC110534172 LOC106602940 other downstream 1434995 48881449 ~ 48907973 (-)
G896841 NA other downstream 2329994 47987761 ~ 47989076 (-)
LOC110534118 LOC106603020 other downstream 3086024 47203241 ~ 47234608 (-)
G899727 NA other upstream 394952 50720986 ~ 50721603 (-)
G899739 LOC106602890 other upstream 417124 50743158 ~ 50750233 (-)
G900070 NA other upstream 644729 50970763 ~ 50981750 (-)
G900807 NA other upstream 1129466 51455500 ~ 51455942 (-)

Expression


Co-expression Network