LOC118966636


Basic Information

Item Value
gene id LOC118966636
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 54657337 ~ 54659796 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036989358.1
ATGATGATGAAGGCTACAATCTTTCTGGGATACCTCCTGGGCCTGTCATTGACTGTTCCTGCTGATGTGGATCATTTGAGAGTTGCACGTTCCAGCTCTGACTCCAACTCTAACTCAAACTCCAAGGAGccccaacccctgaaccagccccaacCCCGGCACCAGCCccaacccctgaaccagccccagcACCTGCCtcaacccctgaaccagccccagaACCTGCCTCAACCCCAGTACCAGCCCCAGCACCTGTCccaacccctgaaccagccccagcACCTGCCTCAACCCCTGAACCAGACCCAGCACCTGCCTCAACCCCTGAACCAGCCtcaacccctgaaccagccccaacCCCGGCACCAGCCCCAACCCCTGAAACAGCCCCAGCACCTGCCtcaacccctgaaccagccccagcACCTGCCtcaacccctgaaccagccccagcACCTGCCccaacccctgaaccagccccagcACCTGCCCCAACCCCTGAACCAGCCACTGCACCTGCCTCAacccctgaaccagccacagCACCTGCCtcaacccctgaaccagccccagcACCTGCCCCAACCCCTGAACCAGTCTCAGCACTTGCCTCAACCCCAGCACCAGCCCCAGCACCTGCCCCAACCCCTGAACCAGCCTCAGCACCTGCCtcaacccctgaaccagccccagcACCTGCCTCAACACCAGCACCAGCCCCAGCACCTGCCccaacccctgaaccagccccagcAACTGCCTCAACCCCTGAACCAGACCCAGCACCTGTCtcaacccctgaaccagccccaacACCTGCCTCAACCCCTGCACCAGCCccaacccctgaaccagccccagcAACTGCCTCAACCCCTGAACCAGACCCAGCACCTGTCtcaacccctgaaccagccccagcACCTGCCTCAACCCCTGCACCAGCCccaacccctgaaccagcccctgCACCTGCCTCAACCCCTGCACCAGCCccaacccctgaaccagcccctgCACCTGCCtcaacccctgaaccagccccagcACCTGAACCAGCCCCTGCACCTGCCtcaacccctgaaccagccccaacccctgaaccagcccctgCACCTGCCTCAACCCCTGCACCAGCCccaacccctgaaccagcccctgCACCTGCCtcaacccctgaaccagccccagcACCTGCCTCAAACCCTGAACCAGCCCCAGCACCTGCCtcaacccctgaaccagccccagcACCTGCCTCAacccctgaaccagccacagCACCTGCCtcaacccctgaaccagccccagcACCCGCCacaacccctgaaccagccccagaACCTGCCTCAACCCCAGTACCAGCCCCAGCACCTGTCCCAACCCCTGAACCATCCCCAGCACCTGCCTCAACCCCTGAACCAGACCCAGCACCTGCCtcaacccctgaaccagccccaaaCCCTGAACCAGCCCCAACCCCGGCACCAGCCCCAACCCCTGAACCAGCTACAGCACCTGCCtcaacccctgaaccagccccagcACCTGCCtcaacccctgaaccagccccagcACCTGCCccaacccctgaaccagccccagcACCTGCCccaacccctgaaccagccccagcACCTGCCtcaacccctgaaccagccccagcACCTGCCTCAacccctgaaccagccacagCACCTGCCtcaacccctgaaccagccccagcACCTGCCCCAACCCCTGAACCAGTCCCAGCACCTGCGTCAACCCCAGCACCAGCCCCAGCACCTGCCccaacccctgaaccagccccagcAACTGCCTCAACCCCTGAACCAGACCCAGCACCTGTCtcaacccctgaaccagccccagcACCTGCCTCAACCCCTGCACCAGCCccaacccctgaaccagcccctgCACCTGCCTCAACCCCTGCACCAGCCccaacccctgaaccagcccagGCACCTGCCTCAACCCCTGCACCAGCCccaacccctgaaccagcccatGCACCTGTTGGGTTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036989358.1 True 2034 mRNA 0.65 3 54657337 54659796

Neighbor

gene id symbol gene type direction distance location
scpp7 NA coding downstream 129651 54524780 ~ 54527686 (-)
LOC110534932 LOC106602785 coding downstream 140525 54510988 ~ 54516812 (-)
LOC110534304 LOC106602785 coding downstream 175264 54476106 ~ 54493725 (-)
enam LOC106602737 coding downstream 190248 54464629 ~ 54467089 (-)
synpo2b LOC106602736 coding downstream 223319 54421742 ~ 54434018 (-)
odam LOC106602794 coding upstream 9115 54668911 ~ 54671854 (-)
scpp9 NA coding upstream 16358 54676154 ~ 54677792 (-)
LOC110534935 LOC106602741 coding upstream 21770 54681566 ~ 54689509 (-)
sparcl1 LOC106602739 coding upstream 30273 54690069 ~ 54705858 (-)
LOC100135808 LOC100135808 coding upstream 56533 54716329 ~ 54717659 (-)
G904165 NA non-coding downstream 19490 54637622 ~ 54637847 (-)
G904133 NA non-coding downstream 80901 54573394 ~ 54576436 (-)
G903956 NA non-coding downstream 187011 54470090 ~ 54470326 (-)
G903955 NA non-coding downstream 187999 54469083 ~ 54469338 (-)
G904184 NA non-coding upstream 2645 54662441 ~ 54662672 (-)
G904204 NA non-coding upstream 15660 54675456 ~ 54676066 (-)
G904258 NA non-coding upstream 47520 54707316 ~ 54707766 (-)
cfap97 cfap97 other downstream 553932 54082166 ~ 54111277 (-)
G903619 primpol other downstream 773564 53879544 ~ 53883773 (-)
casp3a LOC106602722 other downstream 778548 53872239 ~ 53878829 (-)
G902519 NA other downstream 1728935 52902194 ~ 52937648 (-)
G900807 NA other downstream 3201395 51455500 ~ 51455942 (-)
G904991 NA other upstream 619703 55279499 ~ 55280341 (-)
LOC110534325 NA other upstream 867729 55527525 ~ 55528458 (-)
G905177 LOC106604999 other upstream 869070 55528866 ~ 55529192 (-)
G906663 NA other upstream 2059587 56690485 ~ 56751990 (-)
G908286 NA other upstream 2798444 57458240 ~ 57890617 (-)

Expression


Co-expression Network