Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118937069 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 54723150 ~ 54723202 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005034466.1 | True | 53 | mRNA | 0.42 | 1 | 54723150 | 54723202 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC100135808 | LOC100135808 | coding | downstream | 5491 | 54716329 ~ 54717659 (-) |
| sparcl1 | LOC106602739 | coding | downstream | 17292 | 54690069 ~ 54705858 (-) |
| LOC110534935 | LOC106602741 | coding | downstream | 33641 | 54681566 ~ 54689509 (-) |
| scpp9 | NA | coding | downstream | 45358 | 54676154 ~ 54677792 (-) |
| odam | LOC106602794 | coding | downstream | 51296 | 54668911 ~ 54671854 (-) |
| fam193a | LOC106610017 | coding | upstream | 26870 | 54750072 ~ 54779983 (-) |
| LOC110534316 | NA | coding | upstream | 254061 | 54976939 ~ 54985945 (-) |
| LOC110534319 | LOC106602749 | coding | upstream | 429334 | 55152536 ~ 55155586 (-) |
| dchs2 | dchs2 | coding | upstream | 453652 | 55176854 ~ 55230032 (-) |
| LOC110533147 | LOC106602751 | coding | upstream | 526302 | 55249504 ~ 55251281 (-) |
| G904263 | NA | non-coding | downstream | 8635 | 54714306 ~ 54714515 (-) |
| G904258 | NA | non-coding | downstream | 15384 | 54707316 ~ 54707766 (-) |
| G904204 | NA | non-coding | downstream | 47084 | 54675456 ~ 54676066 (-) |
| G904372 | NA | non-coding | upstream | 58259 | 54781461 ~ 54781723 (-) |
| G904374 | NA | non-coding | upstream | 59340 | 54782542 ~ 54782859 (-) |
| G904383 | LOC106581475 | non-coding | upstream | 72526 | 54795728 ~ 54795972 (-) |
| G904397 | NA | non-coding | upstream | 112006 | 54835208 ~ 54835438 (-) |
| G904398 | NA | non-coding | upstream | 112403 | 54835605 ~ 54842345 (-) |
| cfap97 | cfap97 | other | downstream | 619745 | 54082166 ~ 54111277 (-) |
| G903619 | primpol | other | downstream | 839377 | 53879544 ~ 53883773 (-) |
| casp3a | LOC106602722 | other | downstream | 844361 | 53872239 ~ 53878829 (-) |
| G902519 | NA | other | downstream | 1794748 | 52902194 ~ 52937648 (-) |
| G900807 | NA | other | downstream | 3267208 | 51455500 ~ 51455942 (-) |
| G904991 | NA | other | upstream | 556297 | 55279499 ~ 55280341 (-) |
| LOC110534325 | NA | other | upstream | 804323 | 55527525 ~ 55528458 (-) |
| G905177 | LOC106604999 | other | upstream | 805664 | 55528866 ~ 55529192 (-) |
| G906663 | NA | other | upstream | 1996181 | 56690485 ~ 56751990 (-) |
| G908286 | NA | other | upstream | 2735038 | 57458240 ~ 57890617 (-) |
