Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118936709 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 55982632 ~ 55984568 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005034181.1 | False | 497 | mRNA | 0.49 | 3 | 55982632 | 55984568 |
| XR_005034182.1 | True | 427 | mRNA | 0.52 | 3 | 55982632 | 55984568 |
55,978,800
55,979,200
55,979,600
55,980,000
55,980,400
55,980,800
55,981,200
55,981,600
55,982,000
55,982,400
55,982,800
55,982,800
55,983,200
55,983,600
55,984,000
55,984,400
55,984,800
55,985,200
55,985,600
55,986,000
55,986,400
55,986,800
NC_048574.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| suclg1 | LOC106602756 | coding | upstream | 515309 | 55445894 ~ 55467323 (+) |
| LOC110534323 | LOC106602753 | coding | upstream | 546446 | 55414512 ~ 55436186 (+) |
| LOC110533148 | tacr3 | coding | upstream | 625709 | 55316450 ~ 55356923 (+) |
| cnga1a | LOC106602752 | coding | upstream | 705239 | 55266623 ~ 55277393 (+) |
| tmem131l | LOC106602747 | coding | upstream | 839082 | 55043454 ~ 55143550 (+) |
| LOC110534327 | LOC106602758 | coding | downstream | 188864 | 56173432 ~ 56177148 (+) |
| LOC110534937 | NA | coding | downstream | 690146 | 56674714 ~ 56676532 (+) |
| LOC110534328 | NA | coding | downstream | 703117 | 56687685 ~ 56693360 (+) |
| LOC118936710 | NA | coding | downstream | 715690 | 56700258 ~ 56707998 (+) |
| LOC118936711 | NA | coding | downstream | 730328 | 56714896 ~ 56723234 (+) |
| G905595 | NA | non-coding | upstream | 7788 | 55973726 ~ 55974844 (+) |
| G905594 | NA | non-coding | upstream | 64673 | 55914701 ~ 55917959 (+) |
| G905582 | NA | non-coding | upstream | 90693 | 55891117 ~ 55891939 (+) |
| G905548 | NA | non-coding | upstream | 138992 | 55843374 ~ 55843640 (+) |
| G905439 | NA | non-coding | upstream | 234806 | 55747437 ~ 55747826 (+) |
| G905723 | NA | non-coding | downstream | 158854 | 56143422 ~ 56233547 (+) |
| G905732 | NA | non-coding | downstream | 198484 | 56183052 ~ 56183986 (+) |
| G905778 | NA | non-coding | downstream | 281196 | 56265764 ~ 56290099 (+) |
| G905872 | NA | non-coding | downstream | 398521 | 56383089 ~ 56383788 (+) |
| G905972 | NA | non-coding | downstream | 579780 | 56564348 ~ 56565299 (+) |
| G904663 | NA | other | upstream | 686578 | 55295237 ~ 55296054 (+) |
| G904621 | LOC106567469 | other | upstream | 751377 | 55230899 ~ 55231255 (+) |
| helt | helt | other | upstream | 2003360 | 53977386 ~ 53980090 (+) |
| G902840 | LOC106602714 | other | upstream | 2307821 | 53670120 ~ 53674811 (+) |
| G902707 | NA | other | upstream | 2462844 | 53516107 ~ 53519788 (+) |
| G906606 | LOC100136012 | other | downstream | 671731 | 56656299 ~ 56656552 (+) |
| LOC110534329 | LOC106602762 | other | downstream | 1005436 | 56953710 ~ 56991150 (+) |
| LOC110534333 | LOC106602771 | other | downstream | 1168196 | 57142719 ~ 57206820 (+) |
| LOC110534354 | NA | other | downstream | 1684014 | 57645943 ~ 57671502 (+) |
| ankrd49 | LOC106602680 | other | downstream | 2472414 | 58456982 ~ 58517975 (+) |
