Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110534937 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 56674714 ~ 56676532 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_002475191.2 | True | 1419 | mRNA | 0.40 | 3 | 56674714 | 56676532 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110534327 | LOC106602758 | coding | upstream | 497566 | 56173432 ~ 56177148 (+) |
| LOC118936709 | NA | coding | upstream | 690146 | 55982632 ~ 55984568 (+) |
| suclg1 | LOC106602756 | coding | upstream | 1207391 | 55445894 ~ 55467323 (+) |
| LOC110534323 | LOC106602753 | coding | upstream | 1238528 | 55414512 ~ 55436186 (+) |
| LOC110533148 | tacr3 | coding | upstream | 1317791 | 55316450 ~ 55356923 (+) |
| LOC110534328 | NA | coding | downstream | 11153 | 56687685 ~ 56693360 (+) |
| LOC118936710 | NA | coding | downstream | 23726 | 56700258 ~ 56707998 (+) |
| LOC118936711 | NA | coding | downstream | 38364 | 56714896 ~ 56723234 (+) |
| LOC110533150 | NA | coding | downstream | 55523 | 56732055 ~ 56739797 (+) |
| LOC110533151 | NA | coding | downstream | 70150 | 56746682 ~ 56754080 (+) |
| G906615 | NA | non-coding | upstream | 11560 | 56662940 ~ 56663154 (+) |
| G906603 | NA | non-coding | upstream | 19728 | 56654749 ~ 56654986 (+) |
| G905994 | NA | non-coding | upstream | 57434 | 56613240 ~ 56617280 (+) |
| G905972 | NA | non-coding | upstream | 109415 | 56564348 ~ 56565299 (+) |
| G905872 | NA | non-coding | upstream | 290926 | 56383089 ~ 56383788 (+) |
| G906624 | NA | non-coding | downstream | 13965 | 56690497 ~ 56703960 (+) |
| G906633 | NA | non-coding | downstream | 42864 | 56719396 ~ 56750048 (+) |
| G906648 | NA | non-coding | downstream | 99681 | 56776213 ~ 56776635 (+) |
| G906745 | NA | non-coding | downstream | 150118 | 56826650 ~ 56826876 (+) |
| G906606 | LOC100136012 | other | upstream | 18162 | 56656299 ~ 56656552 (+) |
| G904663 | NA | other | upstream | 1378660 | 55295237 ~ 55296054 (+) |
| G904621 | LOC106567469 | other | upstream | 1443459 | 55230899 ~ 55231255 (+) |
| helt | helt | other | upstream | 2695442 | 53977386 ~ 53980090 (+) |
| G902840 | LOC106602714 | other | upstream | 2999903 | 53670120 ~ 53674811 (+) |
| LOC110534329 | LOC106602762 | other | downstream | 313472 | 56953710 ~ 56991150 (+) |
| LOC110534333 | LOC106602771 | other | downstream | 476232 | 57142719 ~ 57206820 (+) |
| LOC110534354 | NA | other | downstream | 992050 | 57645943 ~ 57671502 (+) |
| ankrd49 | LOC106602680 | other | downstream | 1780450 | 58456982 ~ 58517975 (+) |
| LOC110534381 | cldnd | other | downstream | 2725410 | 59401708 ~ 59408944 (+) |
