Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110534487 |
| gene name | LOC106602380 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 65329540 ~ 65408744 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| neuronal membrane glycoprotein M6-a isoform X1 |
| id | name | namespace |
|---|---|---|
| GO:0016021 | integral component of membrane | cellular_component |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036933618.1 | False | 3499 | mRNA | 0.42 | 7 | 65329540 | 65408744 |
| XM_036933619.1 | False | 1632 | mRNA | 0.53 | 7 | 65354500 | 65406122 |
| XM_036933617.1 | True | 3556 | mRNA | 0.43 | 7 | 65354506 | 65408744 |
65,300,000
65,310,000
65,320,000
65,330,000
65,340,000
65,350,000
65,360,000
65,370,000
65,380,000
65,380,000
65,390,000
65,400,000
65,410,000
65,420,000
65,430,000
65,440,000
65,450,000
65,460,000
NC_048574.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| asb5b | LOC106602379 | coding | upstream | 40358 | 65274432 ~ 65289182 (+) |
| LOC110534482 | vegfc | coding | upstream | 94183 | 65183402 ~ 65235357 (+) |
| LOC110534481 | LOC106602441 | coding | upstream | 1055010 | 64239200 ~ 64274530 (+) |
| trnak-cuu-5 | NA | coding | upstream | 1160209 | 64169259 ~ 64169331 (+) |
| si:ch211-89o9.6 | LOC106602402 | coding | upstream | 1160522 | 64152774 ~ 64169018 (+) |
| LOC118936727 | NA | coding | downstream | 4305 | 65413049 ~ 65433465 (+) |
| LOC118936932 | NA | coding | downstream | 79291 | 65488035 ~ 65494902 (+) |
| LOC110533186 | LOC106610166 | coding | downstream | 113998 | 65522742 ~ 65632123 (+) |
| LOC110534489 | LOC106602382 | coding | downstream | 224103 | 65632847 ~ 65658686 (+) |
| LOC110534493 | NA | coding | downstream | 271438 | 65680182 ~ 65690652 (+) |
| G916111 | NA | non-coding | upstream | 2328 | 65326923 ~ 65327212 (+) |
| G916109 | NA | non-coding | upstream | 3951 | 65325360 ~ 65325589 (+) |
| G916091 | NA | non-coding | upstream | 27381 | 65301884 ~ 65302159 (+) |
| G916090 | LOC106602375 | non-coding | upstream | 27682 | 65301611 ~ 65301858 (+) |
| G916080 | NA | non-coding | upstream | 45649 | 65278332 ~ 65283891 (+) |
| G916254 | NA | non-coding | downstream | 26879 | 65435623 ~ 65435950 (+) |
| G916258 | NA | non-coding | downstream | 29447 | 65438191 ~ 65438397 (+) |
| G916267 | NA | non-coding | downstream | 35519 | 65444263 ~ 65444670 (+) |
| G916272 | NA | non-coding | downstream | 38052 | 65446796 ~ 65447021 (+) |
| G916308 | NA | non-coding | downstream | 62828 | 65471572 ~ 65473182 (+) |
| G916075 | LOC106602378 | other | upstream | 55779 | 65272602 ~ 65273761 (+) |
| G915549 | NA | other | upstream | 490219 | 64838099 ~ 64839321 (+) |
| G913133 | NA | other | upstream | 788155 | 64540049 ~ 64541385 (+) |
| G912898 | NA | other | upstream | 1166282 | 64162400 ~ 64163258 (+) |
| G916281 | NA | other | downstream | 44358 | 65453102 ~ 65453500 (+) |
| LOC110534496 | LOC106602387 | other | downstream | 423722 | 65811359 ~ 65841626 (+) |
| G916697 | NA | other | downstream | 676405 | 66085149 ~ 66085737 (+) |
| G917796 | LOC106602395 | other | downstream | 1348377 | 66757121 ~ 66757986 (+) |
