Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110534497 |
| gene name | LOC106602389 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 65845438 ~ 65847857 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: high mobility group protein B2-like isoform X1 |
| id | description |
|---|---|
| K11295 | HMGB2; high mobility group protein B2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021619375.2 | True | 1262 | mRNA | 0.45 | 5 | 65845438 | 65847857 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110534496 | LOC106602387 | coding | upstream | 3817 | 65811359 ~ 65841626 (+) |
| LOC110534495 | LOC106610170 | coding | upstream | 38677 | 65804569 ~ 65806761 (+) |
| LOC110534492 | LOC106610168 | coding | upstream | 135921 | 65696361 ~ 65709517 (+) |
| LOC110534493 | NA | coding | upstream | 156318 | 65680182 ~ 65690652 (+) |
| LOC110534489 | LOC106602382 | coding | upstream | 186752 | 65632847 ~ 65658686 (+) |
| LOC110534507 | LOC106610175 | coding | downstream | 496123 | 66343980 ~ 66357223 (+) |
| LOC110534508 | fbxw7 | coding | downstream | 626258 | 66474115 ~ 66567984 (+) |
| LOC110534511 | gatb | coding | downstream | 879219 | 66727076 ~ 66749969 (+) |
| LOC110534512 | LOC106610182 | coding | downstream | 971251 | 66819108 ~ 66843648 (+) |
| LOC110533189 | LOC106610178 | coding | downstream | 1010600 | 66858457 ~ 67246560 (+) |
| G916488 | NA | non-coding | upstream | 77695 | 65765742 ~ 65767743 (+) |
| G916431 | NA | non-coding | upstream | 228303 | 65616086 ~ 65617135 (+) |
| G916369 | NA | non-coding | upstream | 330016 | 65515207 ~ 65515422 (+) |
| G916366 | NA | non-coding | upstream | 331515 | 65513699 ~ 65513923 (+) |
| G916707 | NA | non-coding | downstream | 265258 | 66113115 ~ 66113501 (+) |
| G916715 | NA | non-coding | downstream | 285831 | 66133688 ~ 66133916 (+) |
| G916717 | NA | non-coding | downstream | 287660 | 66135517 ~ 66135740 (+) |
| G917126 | NA | non-coding | downstream | 303657 | 66151514 ~ 66151761 (+) |
| G917204 | NA | non-coding | downstream | 361423 | 66209280 ~ 66209557 (+) |
| LOC110533186 | LOC106610166 | other | upstream | 213451 | 65522742 ~ 65632123 (+) |
| G916281 | NA | other | upstream | 391938 | 65453102 ~ 65453500 (+) |
| G916075 | LOC106602378 | other | upstream | 571677 | 65272602 ~ 65273761 (+) |
| G915549 | NA | other | upstream | 1006117 | 64838099 ~ 64839321 (+) |
| G916697 | NA | other | downstream | 237292 | 66085149 ~ 66085737 (+) |
| G917796 | LOC106602395 | other | downstream | 909264 | 66757121 ~ 66757986 (+) |
| G917798 | LOC106613263 | other | downstream | 911427 | 66759284 ~ 66759753 (+) |
| G918009 | NA | other | downstream | 1361080 | 67208937 ~ 67211240 (+) |
