LOC110497182 (LOC106610322)


Basic Information

Item Value
gene id LOC110497182
gene name LOC106610322
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 71447845 ~ 71450759 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021573160.2
TATAGTAAAAAGCATATGGATACATAATACAGGGTTTCCTTCATTTTGGATGAATGTAAAAAATGTAGTAAGCAATTGTGTGTAGCATATTTTGCACAATGCATCAGTGAAATCAGTGATCATGAAAAATCCCTGTTTTGTTTCCTCCTCCAGTCCCGTAGATgtcactcacacactcagccaAGGGGGGAAATGTGTAGTTACCGTTGTCGTTGACTGTTTTCTTCTTCATGAGTTTTGGCTGTGCACTCCATGGCGGTGTCCTCCATGGTGTCATTGTAGTGAGGTTGAATATCAAGAAAATAAGAACTAGCCCTTCTTAATCATGACTGGTTACACAGCAGACGAAAAGCTCCGCGTAGAGCAGATTTCAAACCTCAGGAGGAAATGGCTGAAGGACCAAGAGCTCAGTCCCAGAGAGCCCGTGCTGCCAAAGACAGCCCCCGGGCCGGTGGCAAAATTCTGGGCTGGCTTTCTGGAACCGAAGACCCTGTGTAGACTTTACACCTACAAAGTCTACACTGGTGGAGTGTTCGCCTTGACCCGGTTGCTGATCCCTGCCTGGGTTGTGCATTATTATGTGAAGTATCATGTTGCTAAAAAGCCCTATGGCATCGTGGAGCTGAAGCCCAGGCTGTTCCCTGGCGACACCATCTTGGAGACGGGAGAGGTTGTTCCAGACCTCCCAGAGAGCCATGGTCACCACTGAAGAAGACATAGTTGAAAGAATTACACAATGTCTTTTTGTCCCTGCCCTGTTGTAAAAAACTTGATGTACATGTCATTAAATAATATTTACAATACTAA

Function

NR:

description
PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 6-like

GO: NA

KEGG:

id description
K03962 NDUFB6; NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 6

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021573160.2 True 807 mRNA 0.45 4 71447845 71450759

Neighbor

gene id symbol gene type direction distance location
LOC110497169 LOC106610324 coding downstream 862 71442408 ~ 71446983 (-)
LOC110497178 LOC106610310 coding downstream 7439 71438459 ~ 71440406 (-)
LOC110497179 LOC106610325 coding downstream 12580 71406747 ~ 71435265 (-)
LOC110497173 LOC100196683 coding downstream 16126 71428009 ~ 71431719 (-)
si:ch211-108d22.2 LOC106610364 coding downstream 43071 71398990 ~ 71404774 (-)
LOC110534568 NA coding upstream 21687 71472446 ~ 71476198 (-)
LOC110515428 mxd4 coding upstream 26390 71477149 ~ 71516366 (-)
LOC118936934 LOC106597769 coding upstream 144393 71595152 ~ 71597145 (-)
LOC118966646 LOC106595337 coding upstream 146456 71597215 ~ 71602590 (-)
LOC118936746 LOC106602209 coding upstream 207585 71658344 ~ 71665901 (-)
G922285 NA non-coding downstream 143151 71303881 ~ 71304694 (-)
G922280 NA non-coding downstream 153781 71290083 ~ 71294064 (-)
G922267 NA non-coding downstream 169926 71277685 ~ 71277919 (-)
G922264 NA non-coding downstream 173638 71273802 ~ 71274207 (-)
G922329 NA non-coding upstream 48166 71498925 ~ 71499755 (-)
G922333 NA non-coding upstream 71545 71522304 ~ 71522614 (-)
G922341 NA non-coding upstream 89179 71539938 ~ 71542905 (-)
G922374 NA non-coding upstream 161360 71612119 ~ 71722343 (-)
G922376 NA non-coding upstream 166006 71616765 ~ 71618259 (-)
LOC110533203 LOC106610354 other downstream 366333 71064699 ~ 71121753 (-)
G921899 NA other downstream 430916 71016496 ~ 71016929 (-)
G921677 LOC106602265 other downstream 631543 70746687 ~ 70816302 (-)
G921673 LOC106602265 other downstream 706526 70738540 ~ 70798813 (-)
G921389 papss1 other downstream 918383 70527538 ~ 70533352 (-)
LOC110534950 LOC106595337 other upstream 295056 71744768 ~ 71752698 (-)
LOC110514144 LOC106602209 other upstream 311702 71747636 ~ 71765505 (-)
G923192 LOC106610383 other upstream 1454818 72905577 ~ 72928468 (-)

Expression


Co-expression Network