LOC110515428 (mxd4)


Basic Information

Item Value
gene id LOC110515428
gene name mxd4
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 71477149 ~ 71516366 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036933856.1
GTGCAGTTGATATGAATCTGGCTGGGAGTCCCAAAGACTCAGAACTGAACATAGACGTTCATATCGACCTAACACAGTTttagtttttatttcatttttgtctcatattattttttttatacattagctgtatatttgtgtatatagatattattttatatttttatacaaGTCAACAAGATGGAACTTAATTCTCTTTTAATTCTCCTGGAGGCTGCAGAATACTtggaaagaagagacagagAAGCAGAACATGGTTACGCGTCTGTTTTACCGTACAATAGCGACTTTTCCCGAAAGAAAACGAAAGCTTCACCAATTTCAAGAAAAACTCAGAACAATAGATCGTCACACAACGAGCTGGAGAAACACAGACGTGCCAAACTACGGCTGTACCTTGAGCAGCTGAAGGAGCTGGTTCCTTTGGGTCCGGACAGCACTAGACACACCACACTGAGCCTGCTGAAAAGGGCCAAGATGCACATCAAGAAGCTGGAGGAGGCGGACAGAAAGGCTCTGAACACCAAAGAGCAGCTCCAGAGAGAGCACCGCTACCTCAAACgacgtctggaacagctggtgatGCCTGGAGGCGTGGAACGTACCCGAACCGACAGCCTAGGCTCCACCATCTCCACCGACTCAGAGCAAGaGGTGGACATTGAAGGAATGGAGTCCCCCCTGGGCGAGGGTGAGCTTGGCGAGGGCGAGGGGGACAGCGTGGACGAGAGCATCAGTGACGACGGCCTCCTGGacggcgaggaggaggaggactacAACCTGCAGAGCAGCTCCAGCGACGCCAGCTACACACAGCATTCCTCACACAGACTGCAGCCGCACCACTGCTAGGGGCCACCAGGGGGCCCCTGAGGGCCACACCTCCAATCAGCCCTCTATGACCCCAGCCCCGCGTACCCTCCTATTCCCTTCCTACCCCCCCTAACATTGCCCCAGCACGCACCCCCTCCAGCCCACGCCACGTGGTCATCAGCCACCCCCCCAGCAAACAGCGGCTGTGGTCTCCCCCTCCCCAATGTCCCCATTGGCGCTTATTCCCTGGAACCAGGAAGTAGACTGTAGACGTTCCTGTCGTGGCTGACTTCCTGACTTTTTCCTgtcctaacccctacaccacaCCCTACCTCACCCCTATCCTATCACCCCTTATCCCGCTTATCTTGCCTAACCTGACCCCcagacctccctcacctctacCTGTTGTGGCTGCAGGCTCGGATATAGCAGAGCAGTTTGTGGTTTTGTTGGGGACCTCTGTGGTGTGGTGGCAGACAGCTTTGACTTGTCAATG

Function

symbol description
mxd4 Predicted to enable protein dimerization activity. Is expressed in head mesenchyme; notochord; pronephric duct; and pronephric mesoderm. Orthologous to human MXD4 (MAX dimerization protein 4).

NR:

description
max dimerization protein 4-like

GO:

id name namespace
GO:0046983 protein dimerization activity molecular_function

KEGG:

id description
K09114 MXD, MAD; MAX dimerization protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036933856.1 True 1312 mRNA 0.53 6 71477149 71516366

Neighbor

gene id symbol gene type direction distance location
LOC110534568 NA coding downstream 951 71472446 ~ 71476198 (-)
LOC110497182 LOC106610322 coding downstream 26390 71447845 ~ 71450759 (-)
LOC110497169 LOC106610324 coding downstream 30166 71442408 ~ 71446983 (-)
LOC110497178 LOC106610310 coding downstream 36743 71438459 ~ 71440406 (-)
LOC110497179 LOC106610325 coding downstream 41884 71406747 ~ 71435265 (-)
LOC118936934 LOC106597769 coding upstream 78786 71595152 ~ 71597145 (-)
LOC118966646 LOC106595337 coding upstream 80849 71597215 ~ 71602590 (-)
LOC118936746 LOC106602209 coding upstream 141978 71658344 ~ 71665901 (-)
LOC118936748 LOC106602203 coding upstream 212465 71728831 ~ 71734927 (-)
LOC110534950 LOC106595337 coding upstream 228402 71744768 ~ 71752698 (-)
G922285 NA non-coding downstream 172455 71303881 ~ 71304694 (-)
G922280 NA non-coding downstream 183085 71290083 ~ 71294064 (-)
G922267 NA non-coding downstream 199230 71277685 ~ 71277919 (-)
G922264 NA non-coding downstream 202942 71273802 ~ 71274207 (-)
G922333 NA non-coding upstream 5938 71522304 ~ 71522614 (-)
G922341 NA non-coding upstream 23572 71539938 ~ 71542905 (-)
G922374 NA non-coding upstream 95753 71612119 ~ 71722343 (-)
G922376 NA non-coding upstream 100399 71616765 ~ 71618259 (-)
LOC110533203 LOC106610354 other downstream 395637 71064699 ~ 71121753 (-)
G921899 NA other downstream 460220 71016496 ~ 71016929 (-)
G921677 LOC106602265 other downstream 660847 70746687 ~ 70816302 (-)
G921673 LOC106602265 other downstream 735830 70738540 ~ 70798813 (-)
G921389 papss1 other downstream 947687 70527538 ~ 70533352 (-)
LOC110514144 LOC106602209 other upstream 246095 71747636 ~ 71765505 (-)
G923192 LOC106610383 other upstream 1389211 72905577 ~ 72928468 (-)

Expression


Co-expression Network