LOC118936934 (LOC106597769)


Basic Information

Item Value
gene id LOC118936934
gene name LOC106597769
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 71595152 ~ 71597145 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036934587.1
AGTAGACTagtactgtagtagactgtagacaGTGTGGTGGACTGTAGAGGAAATGAGAATCCTATGATCACATGTGTTTTCTTACAGAAGCAGAAGCCAGTACAGTCAGTGAATGGTTACTACCAGCTGACTGGCGTAGTCTCTCATTTGGGAGGCTCCGCAAACTCCGGGCACTACATTAGTGACATATTGCATGCCAGTGGAAACTGGTTCTGCTGTAACGACAGCCAGGTGTCAATGTCCAATGAAGCCACTGTGCTGAGGACCAGAGCCCGGAGTGCCTACATGCTCTTCTATATGTTCAGGGCAATAGAGCGGGAGGCCCCAGCACACAGGGCCTAACAGGGCCACCAGCATCAGCCCCAGCCTAAACAGGGGCAGCACCTGGACCAGCCTCCAAACACTCAGACCTGTCTCAACAGGGGTGGTACCAGGCCCAGCCTCAaaacccccagcccagcctcaacACTCACACACCTGCCTCGAAAGGGGTAGCACTTGGCCCAACATCAACAACCCCGAGCCCAGCCACAACAGGGGCAGCACTGGGCCCAACATCAACACACCCAGCCCAGCCTCAACATGGGAAGAACCAGGCCCAGTCTCAACATGGGCAGAACAAGACCCAGCCCCAACACCCTCAGACTTGCCTCAATAATGTGATTGGGATGCTTAATATCAACAATGTTTACAATGACGCCACACCCTTACTGTACCACTGTGACCTGTCACTATTAAAGGCTGTGTGACGTGACATACTGTCTTTTCTTATCTCACGTACACTCCTttacgtatttatttggacagtgaagctacaaCTTTTCATTTGGCTCTATACGCCAGCGTTTTGGattggagatcaaatgtttcatatgtggtgactgtacagaatgtcacctttaatttaatgaatggtaaataatgttgagtgagaaagttacagaggatcatacccccaagacatgctaacc
>TU1048993
TGTTGCTGACAGCCtcagtggtgagaagagagagagagatagagagagtgaaacCAGTGAAAAATAAGttatgacagaacactgagataGTTATGAGGAGTACACAATGTAGTAGACCTGTAGTAGACTagtactgtagtagactgtagacaGTGTGGTGGACTGTAGAGGAAATGAGAATCCTATGATCACATGTGTTTTCTTACAGAAGCAGAAGCCAGTACAGTCAGTGAATGGTTACTACCAGCTGACTGGCGTAGTCTCTCATTTGGGAGGCTCCGCAAACTCCGGGCACTACATTAGTGACATATTGCATGCCAGTGGAAACTGGTTCTGCTGTAACGACAGCCAGGTGTCAATGTCCAATGAAGCCACTGTGCTGAGGACCAGAGCCCGGAGTGCCTACATGCTCTTCTATATGTTCAGGGCAATAGAGCGGGAGGCCCCAGCACACAGGGCCTAACAGGGCCACCAGCATCAGCCCCAGCCTAAACAGGGGCAGCACCTGGACCAGCCTCCAAACACTCAGACCTGTCTCAACAGGGGTGGTACCAGGCCCAGCCTCAaaacccccagcccagcctcaacACTCACACACCTGCCTCGAAAGGGGTAGCACTTGGCCCAACATCAACAACCCCGAGCCCAGCCACAACAGGGGCAGCACTGGGCCCAACATCAACACACCCAGCCCAGCCTCAACATGGGAAGAACCAGGCCCAGTCTCAACATGGGCAGAACAAGACCCAGCCCC

Function

NR:

description
PREDICTED: ubiquitin carboxyl-terminal hydrolase 37-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036934587.1 False 971 mRNA 0.50 3 71595152 71597024
TU1048993 True 754 TUCP 0.53 3 71595490 71597145

Neighbor

gene id symbol gene type direction distance location
LOC110515428 mxd4 coding downstream 78786 71477149 ~ 71516366 (-)
LOC110534568 NA coding downstream 118954 71472446 ~ 71476198 (-)
LOC110497182 LOC106610322 coding downstream 144393 71447845 ~ 71450759 (-)
LOC110497169 LOC106610324 coding downstream 148169 71442408 ~ 71446983 (-)
LOC110497178 LOC106610310 coding downstream 154746 71438459 ~ 71440406 (-)
LOC118966646 LOC106595337 coding upstream 191 71597215 ~ 71602590 (-)
LOC118936746 LOC106602209 coding upstream 61320 71658344 ~ 71665901 (-)
LOC118936748 LOC106602203 coding upstream 131807 71728831 ~ 71734927 (-)
LOC110534950 LOC106595337 coding upstream 147744 71744768 ~ 71752698 (-)
LOC110534519 NA coding upstream 162581 71759605 ~ 71761025 (-)
G922341 NA non-coding downstream 52247 71539938 ~ 71542905 (-)
G922333 NA non-coding downstream 72538 71522304 ~ 71522614 (-)
G922329 NA non-coding downstream 95397 71498925 ~ 71499755 (-)
LOC110497179 LOC106610325 non-coding downstream 185140 71406747 ~ 71435265 (-)
G922285 NA non-coding downstream 290458 71303881 ~ 71304694 (-)
G922374 NA non-coding upstream 15095 71612119 ~ 71722343 (-)
G922376 NA non-coding upstream 19741 71616765 ~ 71618259 (-)
G922411 NA non-coding upstream 113274 71710298 ~ 71711040 (-)
LOC110533203 LOC106610354 other downstream 513640 71064699 ~ 71121753 (-)
G921899 NA other downstream 578223 71016496 ~ 71016929 (-)
G921677 LOC106602265 other downstream 778850 70746687 ~ 70816302 (-)
G921673 LOC106602265 other downstream 853833 70738540 ~ 70798813 (-)
G921389 papss1 other downstream 1065690 70527538 ~ 70533352 (-)
LOC110514144 LOC106602209 other upstream 165437 71747636 ~ 71765505 (-)
G923192 LOC106610383 other upstream 1308553 72905577 ~ 72928468 (-)
G924041 NA other upstream 2033118 73630142 ~ 73631970 (-)

Expression


Co-expression Network