LOC118966646 (LOC106595337)


Basic Information

Item Value
gene id LOC118966646
gene name LOC106595337
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 71597215 ~ 71602590 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036989380.1
CAACCAGTGAAATGTATTTCTGAGTTAGGTTGGCTTGTTTTCAGAATTCACAACGAAATGCCTCCAGCTGTCCATCACCACTGTAAATATAAagagtggttatagaggAAAAAACGTCAGAAAGCAAATTCAGTTGATGTGGAGCAGAAGACAAGAAAGAAGAAGGAGAGGGGcacttcatccccctctccaatTCCATCTGACCGTTCTGAACGGAATGGCTCCGCTACCTCTGACCCCTCACCCTCTGAccaactctcctccctccatccacctccctctcctgttAAATGTTCCTCTCAGCCTTGCTCTCCTGCTAAACAACCCTCTGTACCCCGGTCACCTGCCAAAAACCCTTCCCCAGTGAAATCCTCTCCAGTGGTGTCCCACCCTAGTTCTCCCTCTCCTACCAACCCTCTGGACCGTCATGGAGACACCAGTCAGGAGGGCACAACAGTCAGaccTCTGTCTCTTCAGGAACACTCTAGTCCAATGCCCCAGAGACCAGTCTCAGCCACCAGAAGCATGACTCTTCCCAGGGCCAGCTCAGCCACCAGAAGCATGACTCTTCCCAGGGCCAGCTCAGCCACCAGAGGGTCAGAAGAGACCCAGGGGGCCAGAGGAGAACGGGGGGAACTGGTCAACATGGAACTTCTTGGGTTGCCTAACATTGGCAACACTTGCTTCCTTAACGCCACCCTGCAGTGCCTCCTGGTCCTGCCTTCCTTCTCAAAGGAAATCCTGCACCAGGAACAACTCTGgagctcctcccccttctccaacCTGCTCAGGTGTCTGTCTGATGTGCACCGTTCAGGTCTACCTGACAGTGTGGCAAACCAGGCCTCAAAAGCAGACCTCATGTGGAAGGTCAAGTACTCCTTGTCGGGATACGATTTGAAGTACCTGGGGGACACGCAACAGGACGCACACGAGTTACTTGTCAATATGCTTTGCCAGCTGAAGGAGGAGGGCATGATTCTGAAGACACTCGGGATGAACTATACCTGCCCTGTTTCCCAGCTGGAGTTCCAGCTTGTGTCGGTGCGCAAATGTACCAGCTGTGGGCGCGAGTCGTCCACCAGAGAGGACTACAACCACCTCTCATTGGACATCAGCCCTGAGCGCACCTTGCTGAACAGCCTAGCACTCACTTTCAAAAGTGAACAGGTTGAATTCACATGTGAGGGCTGTAAAGGCCTCCACGCCTCAAAGGTGGAGCAGTTCCACACACTGCCTCTTGTGCTGGTTCTGCATCTGAAGAGGTTTGGAGGACCTGGGGGGTTGGAGAAGCTGGAGGCTCCTCTTTTGTTTCCTTCGGAGCTGAGGCTCTCCTGCCTCTGTGGGGACATGGTGCCACACCTGCACAGTGCCAGCCCACAGGCCCTCACCAACCAGGCCCCCAGCATCCAGGGGTCCATCCCCCAGACCCTCGCCAGCCAAGTCTCCAGCCCACCTGGAGCGGCCAAAGACAGTGACCTCTGCTGTTCAGTCCAGAGCAATTCAGACAAGTGA

Function

NR:

description
ubiquitin carboxyl-terminal hydrolase 37-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036989380.1 True 1515 mRNA 0.55 10 71597215 71602590

Neighbor

gene id symbol gene type direction distance location
LOC118936934 LOC106597769 coding downstream 191 71595152 ~ 71597145 (-)
LOC110515428 mxd4 coding downstream 80849 71477149 ~ 71516366 (-)
LOC110534568 NA coding downstream 121017 71472446 ~ 71476198 (-)
LOC110497182 LOC106610322 coding downstream 146456 71447845 ~ 71450759 (-)
LOC110497169 LOC106610324 coding downstream 150232 71442408 ~ 71446983 (-)
LOC118936746 LOC106602209 coding upstream 55754 71658344 ~ 71665901 (-)
LOC118936748 LOC106602203 coding upstream 126241 71728831 ~ 71734927 (-)
LOC110534950 LOC106595337 coding upstream 142178 71744768 ~ 71752698 (-)
LOC110534519 NA coding upstream 157015 71759605 ~ 71761025 (-)
LOC110514144 LOC106602209 coding upstream 158829 71747636 ~ 71765505 (-)
G922341 NA non-coding downstream 54310 71539938 ~ 71542905 (-)
G922333 NA non-coding downstream 74601 71522304 ~ 71522614 (-)
G922329 NA non-coding downstream 97460 71498925 ~ 71499755 (-)
LOC110497179 LOC106610325 non-coding downstream 187203 71406747 ~ 71435265 (-)
G922285 NA non-coding downstream 292521 71303881 ~ 71304694 (-)
G922374 NA non-coding upstream 9529 71612119 ~ 71722343 (-)
G922376 NA non-coding upstream 14175 71616765 ~ 71618259 (-)
G922411 NA non-coding upstream 107708 71710298 ~ 71711040 (-)
LOC110533203 LOC106610354 other downstream 515703 71064699 ~ 71121753 (-)
G921899 NA other downstream 580286 71016496 ~ 71016929 (-)
G921677 LOC106602265 other downstream 780913 70746687 ~ 70816302 (-)
G921673 LOC106602265 other downstream 855896 70738540 ~ 70798813 (-)
G923192 LOC106610383 other upstream 1302987 72905577 ~ 72928468 (-)
G924041 NA other upstream 2027552 73630142 ~ 73631970 (-)

Expression


Co-expression Network