LOC118936746 (LOC106602209)


Basic Information

Item Value
gene id LOC118936746
gene name LOC106602209
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 71658344 ~ 71665901 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036933860.1
TCATTTTGAGTTTCCGGTAAACTCTTTGTTTCCTTTCATGTGTCCAACCAATTATTATTGGGTTATTCACCATGGCAACCAGTGAAATGTATTTCTGAGTTAGGTTGGCTTGTTTTCAGAATTCACAACGAAATGCCTCCAGCTGTCCATCACCACTGTAAATATAAagagtggttatagaggAAAAAACGTCAGAAAGCAAATTCAGTTGATGTGGAGCAGAAGACAAGAAAGAAGAAGGAGAGGGGcacttcatccccctctccaatTCCATCTGACCGTTCTGAACGGAATGGCTCCGCTACCTCTGACCCCTCACCCTCTGAccaactctcctccctccatccacctccctctcctgttAAATGTTCCTCTCAGCCTTGCTCTCCTGCTAAACAACCCTCTGTACCCCGGTCACCTGCCAAAAACCCTTCCCCAGTGAAATCCTCTCCAGTGGTGTCCCAGCCTAGTTCTCCCTCTCCTACCAACCCTCTGGACCGTCATGGAGACACCAGTCAGGAGGGCACAACAGTCAGaccTCTGTCTCTTCAGGAACACTCTAGTCCAATGCCCCAGAGACCAGTCTCAGCCACCAGAAGCATGACTCTTCCCAGGGCCAGCTCAGCCACCAGAAGCATGACTCTTCCCAGGGCCAGCTCAGCCACCAGAGGGTCAGAAGAGACCCAGGGGGCCAGAGGAGAACGGGGGGAACTGGTCAACATGGAACTTCTTGGGTTGCCTAACATTGGCAACACTTGCTTCCTTAACGCCACCCTGCAGTGCCTCCTGGTCCTGCCTTCCTTCTCAAAGGAAATCCTGCACCAGGAACAACTCTGgagctcctcccccttctccaacCTGCTCAGGTGTCTGTCTGATGTGCACCGTTCGGGTCTACCTGACAGTGTGGCAAACCAGGCCTCAAAAGCAGACCTCATGTGGAAGGTCAAGTACTCCTTGTCGGGATACGATTTGAAGTATCTGGGGGACACGCAACAGGACGCACACGAGTTACTTGTCAATATGCTGTGCCAGCTGAAGGAGGAGGGCATGATTCTGAAGACATTCGGGATGAACTATACCTGCCCTGTTTCCCAGCTGGAGTTCCAGCTTGTGTCGGTGCGCAAATGTACCAGCTGTGGGCGCGAGTCGTCCACCAGAGAGGACTACAACCACCTCTCATTGGACATCAGCCCTGAGCGCACCTTGCTGAACAGCCTAGCACTCACTTTCAAAAGTGAACAGGTTGAATTCACATGTGAGGGCTGTAAAGGCCTCCACGCCTCAAAGGTGGAGCAGTTCCACACACTGCCTCTTGTGCTGGTTCTGCATCTGAAGAGGTTTGGAGGACTTGGGGGGTTGGAGAAGCTGGAGGCTCCTCTTTTGTTTCCTTCGGAGCTGAGGCTCTCCACCCTCTATGGGGACATGGTGCCACACCTGCACAGTGCCAGCCCACAGGCCCTCACCAACCAGGCCCCCAGCATCCAGGGGTCCATCCCCCAGACCTTTGCCAGCCAAGTCTCCAGCCCACCTGGAGCGGCCAAAGACAGCGCCCTCTGCTGTTCAGAAGCAGAAGCCAGTACAGTCAGTGAATGGTTACTACCAGCTGACTGGCGTAGTCTCTCATTTGGGAGGCTCCGCAAACTCCGGGCAATAGAGCGGGAGGCCCCAGCACACAGGGCCTAACAGGGCCACCAGCATCAGCCCCAGCCTAAACAGGGGCAGCACCTGGACCAGCCTCCAAACACTCAGACCTGTCTCAACAGGGGTAGTACCAGGCCCACTCTCAaaacccccagcccagcctcaacCCTCACACACCTGCCTCAAAATGGGTAGCACTTGGCCCAACATCAACAACCCCGAGCCCAGCAACATCAGGGGCAGCACGGGGCCCAACATCAACACACCCAGCCCAGCCTCAACATGGGAAGAACCAGGCCCAGTTTCAACATGGGCAGAACAAGACCCAGCCCCAACACCCTCAGACCTGCCTCAACAGGTGCAGCATTCGGCACAACTTCAATCATGCTGCTCTTCAACACTAGCATGAACATTCTTTCAGTAGCTTATGTCATAAATACCTGCCCTTGATTTGACTACTTCACCTAATGTATAAACGTATAAAGTATACACACTAAATGTAGTACACATGTAGATGTGGTGGATAGAGAGTGTGATTATTTAGAGGATATAACATCCCTTCTATTTGGTTTGGTTTGAAATCCTCCTGTTGTGAAATACACTGTGGTGTCTAACCTCTTTTTCAGCATGGTCACACCGGAAGACCTGG
>XM_036933862.1
TCATTTTGAGTTTCCGGTAAACTCTTTGTTTCCTTTCATGTGTCCAACCAATTATTATTGGGTTATTCACCATGGCAACCAGTGAAATGTATTTCTGAGTTAGGTTGGCTTGTTTTCAGAATTCACAACGAAATGCCTCCAGCTGTCCATCACCACTGTAAATATAAagagtggttatagaggAAAAAACGTCAGAAAGCAAATTCAGTTGATGTGGAGCAGAAGACAAGAAAGAAGAAGGAGAGGGGcacttcatccccctctccaatTCCATCTGACCGTTCTGAACGGAATGGCTCCGCTACCTCTGACCCCTCACCCTCTGAccaactctcctccctccatccacctccctctcctgttAAATGTTCCTCTCAGCCTTGCTCTCCTGCTAAACAACCCTCTGTACCCCGGTCACCTGCCAAAAACCCTTCCCCAGTGAAATCCTCTCCAGTGGTGTCCCAGCCTAGTTCTCCCTCTCCTACCAACCCTCTGGACCGTCATGGAGACACCAGTCAGGAGGGCACAACAGTCAGaccTCTGTCTCTTCAGGAACACTCTAGTCCAATGCCCCAGAGACCAGTCTCAGCCACCAGAAGCATGACTCTTCCCAGGGCCAGCTCAGCCACCAGAAGCATGACTCTTCCCAGGGCCAGCTCAGCCACCAGAGGGTCAGAAGAGACCCAGGGGGCCAGAGGAGAACGGGGGGAACTGGTCAACATGGAACTTCTTGGGTTGCCTAACATTGGCAACACTTGCTTCCTTAACGCCACCCTGCAGTGCCTCCTGGTCCTGCCTTCCTTCTCAAAGGAAATCCTGCACCAGGAACAACTCTGgagctcctcccccttctccaacCTGCTCAGGTGTCTGTCTGATGTGCACCGTTCGGGTCTACCTGACAGTGTGGCAAACCAGGCCTCAAAAGCAGACCTCATGTGGAAGGTCAAGTACTCCTTGTCGGGATACGATTTGAAGTATCTGGGGGACACGCAACAGGACGCACACGAGTTACTTGTCAATATGCTGTGCCAGCTGAAGGAGGAGGGCATGATTCTGAAGACATTCGGGATGAACTATACCTGCCCTGTTTCCCAGCTGGAGTTCCAGCTTGTGTCGGTGCGCAAATGTACCAGCTGTGGGCGCGAGTCGTCCACCAGAGAGGACTACAACCACCTCTCATTGGACATCAGCCCTGAGCGCACCTTGCTGAACAGCCTAGCACTCACTTTCAAAAGTGAACAGGTTGAATTCACATGTGAGGGCTGTAAAGGCCTCCACGCCTCAAAGGTGGAGCAGTTCCACACACTGCCTCTTGTGCTGGTTCTGCATCTGAAGAGGTTTGGAGGACTTGGGGGGTTGGAGAAGCTGGAGGCTCCTCTTTTGTTTCCTTCGGAGCTGAGGCTCTCCACCCTCTATGGGGACATGGTGCCACACCTGCACAGTGCCAGCCCACAGGCCCTCACCAACCAGGCCCCCAGCATCCAGGGGTCCATCCCCCAGACCTTTGCCAGCCAAGTCTCCAGCCCACCTGGAGCGGCCAAAGACAGCGCCCTCTGCTGTTCAGAAGCAGAAGCCAGTACAGTCAGTGAATGGTTACTACCAGCTGACTGGCGTAGTCTCTCATTTGGGAGGCTCCGCAAACTCCGGGCACTACATTAGTGACATATTGCATGCCAGTGGAAACTGGTTCTGCTGTAACGACAGCCAGGTGTCAATGTCCAATGAAGCCACTGTGCTGAGGACCAGAGCCCGGAGTGCCTACATGCTCTTCTATATGTTCAGGTACTGTTTACTCTCACCATCTATATTCTTGTGTTGCTATTTATGTGTACGGTTCCTTTCACCCTACAGGGCAATAGAGCGGGAGGCCCCAGCACACAGGGCCTAACAGGGCCACCAGCATCAGCCCCAGCCTAAACAGGGGCAGCACCTGGACCAGCCTCCAAACACTCAGACCTGTCTCAACAGGGGTAGTACCAGGCCCACTCTCAaaacccccagcccagcctcaacCCTCACACACCTGCCTCAAAATGGGTAGCACTTGGCCCAACATCAACAACCCCGAGCCCAGCAACATCAGGGGCAGCACGGGGCCCAACATCAACACACCCAGCCCAGCCTCAACATGGGAAGAACCAGGCCCAGTTTCAACATGGGCAGAACAAGACCCAGCCCCAACACCCTCAGACCTGCCTCAACAGGTGCAGCATTCGGCACAACTTCAATCATGCTGCTCTTCAACACTAGCATGAACATTCTTTCAGTAGCTTATGTCATAAATACCTGCCCTTGATTTGACTACTTCACCTAATGTATAAACGTATAAAGTATACACACTAAATGTAGTACACATGTAGATGTGGTGGATAGAGAGTGTGATTATTTAGAGGATATAACATCCCTTCTATTTGGTTTGGTTTGAAATCCTCCTGTTGTGAAATACACTGTGGTGTCTAACCTCTTTTTCAGCATGGTCACACCGGAAGACCTGG
>XR_005034222.1
TCATTTTGAGTTTCCGGTAAACTCTTTGTTTCCTTTCATGTGTCCAACCAATTATTATTGGGTTATTCACCATGGCAACCAGTGAAATGTATTTCTGAGTTAGGTTGGCTTGTTTTCAGAATTCACAACGAAATGCCTCCAGCTGTCCATCACCACTGTAAATATAAagagtggttatagaggAAAAAACGTCAGAAAGCAAATTCAGTTGATGTGGAGCAGAAGACAAGAAAGAAGAAGGAGAGGGGcacttcatccccctctccaatTCCATCTGACCGTTCTGAACGGAATGGCTCCGCTACCTCTGACCCCTCACCCTCTGAccaactctcctccctccatccacctccctctcctgttAAATGTTCCTCTCAGCCTTGCTCTCCTGCTAAACAACCCTCTGTACCCCGGTCACCTGCCAAAAACCCTTCCCCAGTGAAATCCTCTCCAGTGGTGTCCCAGCCTAGTTCTCCCTCTCCTACCAACCCTCTGGACCGTCATGGAGACACCAGTCAGGAGGGCACAACAGTCAGaccTCTGTCTCTTCAGGAACACTCTAGTCCAATGCCCCAGAGACCAGTCTCAGCCACCAGAAGCATGACTCTTCCCAGGGCCAGCTCAGCCACCAGAAGCATGACTCTTCCCAGGGCCAGCTCAGCCACCAGAGGGTCAGAAGAGACCCAGGGGGCCAGAGGAGAACGGGGGGAACTGGTCAACATGGAACTTCTTGGGTTGCCTAACATTGGCAACACTTGCTTCCTTAACGCCACCCTGCAGTGCCTCCTGGTCCTGCCTTCCTTCTCAAAGGAAATCCTGCACCAGGAACAACTCTGgagctcctcccccttctccaacCTGCTCAGGTGTCTGTCTGATGTGCACCGTTCGGGTCTACCTGACAGTGTGGCAAACCAGGCCTCAAAAGCAGACCTCATGTGGAAGGTCAAGTACTCCTTGTCGGGATACGATTTGAAGTATCTGGGGGACACGCAACAGGACGCACACGAGTTACTTGTCAATATGCTGTGCCAGCTGAAGGAGGAGGGCATGATTCTGAAGACATTCGGGATGAACTATACCTGCCCTGTTTCCCAGCTGGAGTTCCAGCTTGTGTCGGTGCGCAAATGTACCAGCTGTGGGCGCGAGTCGTCCACCAGAGAGGACTACAACCACCTCTCATTGGACATCAGCCCTGAGCGCACCTTGCTGAACAGCCTAGCACTCACTTTCAAAAGTGAACAGGTTGAATTCACATGTGAGGGCTGTAAAGGCCTCCACGCCTCAAAGGTGGAGCAGTTCCACACACTGCCTCTTGTGCTGGTTCTGCATCTGAAGAGGTTTGGAGGACTTGGGGGGTTGGAGAAGCTGGAGGCTCCTCTTTTGTTTCCTTCGGAGCTGAGGCTCTCCACCCTCTATGGGGACATGGTGCCACACCTGCACAGTGCCAGCCCACAGGCCCTCACCAACCAGGCCCCCAGCATCCAGGGGTCCATCCCCCAGACCTTTGCCAGCCAAGTCTCCAGCCCACCTGGAGCGGCCAAAGACAGCGCCCTCTGCTGTTCAGAAGCAGAAGCCAGTACAGTCAGTGAATGGTTACTACCAGCTGACTGGCGTAGTCTCTCATTTGGGAGGCTCCGCAAACTCCGGGCACTACATTAGTGACATATTGCATGCCAGTGGAAACTGGTTCTGCTGTAACGACAGCCAGGTGTCAATGTCCAATGAAGCCACTGTGCTGAGGACCAGAGCCCGGAGTGCCTACATGCTCTTCTATATGTTCAGGGCAATAGAGCGGGAGGCCCCAGCACACAGGGCCTAACAGGGCCACCAGCATCAGCCCCAGCCTAAACAGGGGCAGCACCTGGACCAGCCTCCAAACACTCAGACCTGTCTCAACAGGGGTAGTACCAGGCCCACTCTCAaaacccccagcccagcctcaacCCTCACACACCTGCCTCAAAATGGGTAGCACTTGGCCCAACATCAACAACCCCGAGCCCAGCAACATCAGGGGCAGCACGGGGCCCAACATCAACACACCCAGCCCAGCCTCAACATGGGAAGAACCAGGCCCAGTTTCAACATGGGCAGAACAAGACCCAGCCCCAACACCCTCAGACCTGCCTCAACAGGTGCAGCATTCGGCACAACTTCAATCATGCTGCTCTTCAACACTAGCATGAACATTCTTTCAGTAGCTTATGTCATAAATACCTGCCCTTGATTTGACTACTTCACCTAATGTATAAACGTATAAAGTATACACACTAAATGTAGTACACATGTAGATGTGGTGGATAGAGAGTGTGATTATTTAGAGGATATAACATCCCTTCTATTTGGTTTGGTTTGAAATCCTCCTGTTGTGAAATACACTGTGGTGTCTAACCTCTTTTTCAGCATGGTCACACCGGAAGACCTGG
>TU1049023
AAGACAGCGCCCTCTGCTGTTCAGAAGCAGAAGCCAGTACAGTCAGTGAATGGTTACTACCAGCTGACTGGCGTAGTCTCTCATTTGGGAGGCTCCGCAAACTCCGGGCACTACATTAGTGACATATTGCATGCCAGTGGAAACTGGTTCTGCTGTAACGACAGCCAGGTGTCAATGTCCAATGAAGCCACTGTGCTGAGGACCAGAGCCCGGAGTGCCTACATGCTCTTCTATATGTTCAGGGCAATAGAGCGGGAGGCCCCAGCACACAGGGCCTAACAGGGCCACCAGCATCAGCCCCAGCCTAAAC
>TU1049024
AcctgtttctctccttcctccagaccTCTGTCTCTTCAGGAACACTCTAGTCCAATGCCCCAGAGACCAGTCTCAGCCACCAGAAGCATGACTCTTCCCAGGGCCAGCTCAGCCACCAGAAGCATGACTCTTCCCAGGGCCAGCTCAGCCACCAGAGGGTCAGAAGAGACCCAGGGGGCCAGAGGAGAACGGGGGGAACTGGTCAACATGGAACTTCTTGGGTTGCCTAACATTGGCAACACTTGCTTCCTTAACGCCACCCTGCAGTGCCTCCTGGTCCTGCCTTCCTTCTCAAAGGAAATCCTGCACCAGGAACAACTCTGgagctcctcccccttctccaacCTGCTCAGGTGTCTGTCTGATGTGCACCGTTCGGGTCTACCTGACAGTGTGGCAAACCAGGCCTCAAAAGCAGACCTCATGTGGAAGGTCAAGTACTCCTTGTCGGGATACGATTTGAAGTATCTGGGGGACACG

Function

NR:

description
ubiquitin carboxyl-terminal hydrolase 37-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036933860.1 False 2293 mRNA 0.53 11 71658344 71665901
XM_036933862.1 False 2498 mRNA 0.52 11 71658344 71665901
XR_005034222.1 False 2429 mRNA 0.53 12 71658344 71665901
TU1049023 False 310 lncRNA 0.55 4 71658920 71660615
TU1049024 True 480 TUCP 0.56 3 71661775 71663134
Loading

Neighbor

gene id symbol gene type direction distance location
LOC118966646 LOC106595337 coding downstream 55754 71597215 ~ 71602590 (-)
LOC118936934 LOC106597769 coding downstream 61320 71595152 ~ 71597145 (-)
LOC110515428 mxd4 coding downstream 141978 71477149 ~ 71516366 (-)
LOC110534568 NA coding downstream 182146 71472446 ~ 71476198 (-)
LOC110497182 LOC106610322 coding downstream 207585 71447845 ~ 71450759 (-)
LOC118936748 LOC106602203 coding upstream 62930 71728831 ~ 71734927 (-)
LOC110534950 LOC106595337 coding upstream 78867 71744768 ~ 71752698 (-)
LOC110534519 NA coding upstream 93704 71759605 ~ 71761025 (-)
LOC110514144 LOC106602209 coding upstream 95518 71747636 ~ 71765505 (-)
LOC118966648 LOC106610349 coding upstream 114684 71780585 ~ 71784330 (-)
G922376 NA non-coding downstream 40085 71616765 ~ 71618259 (-)
G922341 NA non-coding downstream 115439 71539938 ~ 71542905 (-)
G922333 NA non-coding downstream 135730 71522304 ~ 71522614 (-)
G922329 NA non-coding downstream 158589 71498925 ~ 71499755 (-)
LOC110497179 LOC106610325 non-coding downstream 248332 71406747 ~ 71435265 (-)
G922411 NA non-coding upstream 44397 71710298 ~ 71711040 (-)
G922407 NA non-coding upstream 130294 71796195 ~ 71849264 (-)
LOC110533203 LOC106610354 other downstream 576832 71064699 ~ 71121753 (-)
G921899 NA other downstream 641415 71016496 ~ 71016929 (-)
G921677 LOC106602265 other downstream 842042 70746687 ~ 70816302 (-)
G921673 LOC106602265 other downstream 917025 70738540 ~ 70798813 (-)
G923192 LOC106610383 other upstream 1239676 72905577 ~ 72928468 (-)
G924041 NA other upstream 1964241 73630142 ~ 73631970 (-)
LOC110517287 LOC106601385 other upstream 3251276 74890707 ~ 74932952 (-)
LOC118936746 LOC106602209 other upstream 1160 71658344 ~ 71665901 (-)

Expression

LOC118936746(LOC106602209) Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 0.5.
End of interactive chart.

LOC118936746(LOC106602209) Expression in each Bioproject

Bar chart with 14 bars.
LOC118936746(LOC106602209) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 8.
End of interactive chart.

Co-expression Network