Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110534773 |
| gene name | fgl1 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 72746969 ~ 72755067 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| fgl1 | Predicted to enable signaling receptor binding activity. Predicted to be involved in negative regulation of T cell activation and regulation of immune response. Predicted to be active in collagen-containing extracellular matrix and extracellular space. Orthologous to human FGL1 (fibrinogen like 1). |
| description |
|---|
| fibrinogen-like protein 1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021619719.2 | True | 1160 | mRNA | 0.53 | 7 | 72746969 | 72755067 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110497295 | LOC106602191 | coding | downstream | 85331 | 72648336 ~ 72661638 (-) |
| LOC110534795 | LOC106602193 | coding | downstream | 168284 | 72574190 ~ 72578685 (-) |
| LOC110534569 | sgcz | coding | downstream | 395380 | 72004823 ~ 72351589 (-) |
| LOC118966648 | LOC106610349 | coding | downstream | 962639 | 71780585 ~ 71784330 (-) |
| LOC110514144 | LOC106602209 | coding | downstream | 981464 | 71747636 ~ 71765505 (-) |
| LOC110534766 | LOC106610393 | coding | upstream | 9343 | 72764410 ~ 72770434 (-) |
| LOC110534754 | LOC106610391 | coding | upstream | 15506 | 72770573 ~ 72779904 (-) |
| LOC110534749 | LOC106602187 | coding | upstream | 26664 | 72781731 ~ 72791068 (-) |
| LOC110534744 | LOC106602172 | coding | upstream | 37543 | 72792610 ~ 72803322 (-) |
| LOC110534782 | LOC106610388 | coding | upstream | 49586 | 72804653 ~ 72808271 (-) |
| G923272 | NA | non-coding | downstream | 28527 | 72717609 ~ 72718442 (-) |
| G923262 | NA | non-coding | downstream | 43257 | 72701759 ~ 72703712 (-) |
| G923261 | NA | non-coding | downstream | 48773 | 72697018 ~ 72698196 (-) |
| G923228 | NA | non-coding | downstream | 122854 | 72623644 ~ 72624115 (-) |
| G923214 | NA | non-coding | downstream | 161750 | 72583742 ~ 72585219 (-) |
| G923297 | NA | non-coding | upstream | 5415 | 72760482 ~ 72761261 (-) |
| G923320 | LOC106602173 | non-coding | upstream | 112519 | 72867586 ~ 72868626 (-) |
| G923326 | NA | non-coding | upstream | 129554 | 72884621 ~ 72885147 (-) |
| LOC110497284 | LOC106602177 | non-coding | upstream | 154717 | 72909569 ~ 72917849 (-) |
| G923185 | LOC106610383 | non-coding | upstream | 160532 | 72915599 ~ 72922200 (-) |
| LOC110534950 | LOC106595337 | other | downstream | 999085 | 71744768 ~ 71752698 (-) |
| LOC118936746 | LOC106602209 | other | downstream | 1083835 | 71658344 ~ 71665901 (-) |
| LOC118936934 | LOC106597769 | other | downstream | 1149824 | 71595152 ~ 71597145 (-) |
| LOC110533203 | LOC106610354 | other | downstream | 1665457 | 71064699 ~ 71121753 (-) |
| G923192 | LOC106610383 | other | upstream | 150510 | 72905577 ~ 72928468 (-) |
| G924041 | NA | other | upstream | 875075 | 73630142 ~ 73631970 (-) |
| LOC110517287 | LOC106601385 | other | upstream | 2162110 | 74890707 ~ 74932952 (-) |
| LOC118966654 | LOC106597013 | other | upstream | 2182838 | 74933999 ~ 74970163 (-) |
| LOC118936366 | LOC106566139 | other | upstream | 2298049 | 75053116 ~ 75056174 (-) |
