LOC110534754 (LOC106610391)


Basic Information

Item Value
gene id LOC110534754
gene name LOC106610391
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 72770573 ~ 72779904 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036933885.1
ttcaagtgaccgctctaacaatggaaatacatgtcctcaaataTGGAAGGAAGGCTGGAGGTGAGATCAGACTGGACCAAAGCCATGCTTCGTTTAACAAATTCGACACTTATTTCCTCCATACAACAATTCCTCACTTTCGTAAACCGATTTGGGCTGAGTAAAAcgtctcgcttcgcctcttcctctggTATTTATTGCAATTCATACTCCGAGCTGTGAAAGGCAGCAATACGCAACAAAGCGTCTAAATCTGCCGAAAAACCACATGAAGAAGAAGAATCGATATCTCTGGAAACGGCCAACACTTCTTCAACCATTCCGCCAGTAGCTAATTTCCTTCCACTGTCAGGTGTTGAACAACACGCATCAACTTTTGTATTTGTGTAACTATGTCTTTCGAACTTGCCTTTCGTTCTCGTGTTGCCTTCATTATGGAAACCTTGACAGCAACAGCCGTGCAAGACATTTGTCAATTTATGGAAGAAACGTATGCTGCTCTTCGAGTGGAAATGTTGCAAGAACAAAACCGAAGTTCGAGGACAAAATTGCAGGTGATGGAGAATAGCAAGGGGAAGGAAAAGCCTGCGAAAAGTATGGAGAGCGTTCAAGAAGACGGTTTCAGAAACTTCCCAGTCGTGGAGCAAATCCTCAATGAACAAGAGGCCAATGGTCTTTGGCTAGAAGGTCACCTTACTGTTGAAGACAAAGGTCCACCGTCATTGGTATCAGAGGAAGAACAGCCATTGCAGATTTTTGGTCAGATGACAGACAAGGGAGTGGAGACATGTTCAGCACCGCTGCTCATTAAACAGGAGGAAACGGATGATGTCATGGAGTCTCAAGGTTACAGCGGGTGGATGCCAGAGACTCACAAGGCCAACCAGAATATCATAGGAAAaagtgatgaggaagagagaaGTCAAGCCTCTAGGGGATCCAAAGAACTTGGACTCGACGTCTTTAAGAAAGAACAGAGTCTGTTGCTGGTGTCAATTGTGGATGCTGCAGCACCTACAAAGAGGAAGAAATATAACATAAGATACACCTGTAAAATATGTGGAAAGACTGGGACCAAGAAAGGCAGAATGACAAGTCACTTGATAACACACAAAGGGACTTCTAGTTGTGATATTTGTGGTGACAAATTCAAGCATCAGAATGGCTTGACAAAGCACAAGCTACTCAAACACAGTGTGAAAACCTACAGTTGCTTTGTGTGCGGAAAGATGTTTTTATATTCTAAAATACGTGACTACCATGAGCGCATACACGTTGGAGAAGACTACTGGTGCGCGGACTGTGGCAAGACGTTCAAGGAGCGCCAGGATCGCGACATGCACGAGTGCATTGTTTGCAAGGGAGACCGGCCCTACAGCTGCTCCGAGTGCAACAAGGACTTTGAAAGGCAGTACCATCTCAAACAACACCAGCTGGAAAAACACCCTCTAATGGTGGAGCAGACTGTCGAACCAGAACCTGAGTCCAAGGACATTGAGGACCAACAGAGTCAGTTTGAGTCAGCTGAGAGTTCTGAGGCACCCATAAGGAATGAACCGATACAATACACTTGTGAAATATGTGGAAAAACTTGGGCGACTCAAAATAGCATGCGCTCTCACATGTTTATACATAGAAAAATACAAAGGAAACACTATACCTGCGACGTCTGTGGCAAGGTATTTAGGCTCAAATCACCTTTCACCAAACATCAGCTCAGACACAAGGTAGACCTGCCCTTCAGCTGCTCAGAGTGCAACAAGGGCTTTAAAAGTCAGTACCAGCTTAAAAAACACCAGCTTGAAAAGCACCCTCTAAAGGTGGAGCAGCCGTGTTCTGATCTTGTATGGACAGCGACCTGAAGGCCTTTGGTTGGTAAGTTCAGGTCCCACAACCTGAGTTGAACAATGATCGTGGTGATGATGTCTAACGTGTGTTCTGTCTGAGAATGTCAGCTACCATTTATGCTCTTCACTGAACATGACCCAAATAAAATGGCTGTAACTGAATTAACATTTTTAAGTGTAAGAATTTTTGGTTTTAATGTCTCATTTTTTCCCTCATATTTTTGGCTTTGGCAAAATTAGATTTTTCCTTTTGTTTGAAAAGCATCATTTAGGCTTCATTGTTAAATAGCTTGTCGTATTTGAATAAAAACATATCCAGACTTATGTTTCCATTTTATAAACAGGGCAACTATGGAATGAGTGAGCGATTACTGATTTGTAAATACAGAGCAACTTTCTCCACCTGGAACTGAATGTGTTTACTTCTGTGACATGGTGAGTTCTCCTATAGAGGGAGGCGGAATCCGAGTAGAACAGCATCCTAAATCAATTGGGTCGATAAACTGGTATTTACGGTAGACTAACGTCATGACCTCTGCCACCCGGAAGTAAACAATGACATGTTAACGGCTAGCGAGCTGAACACAAACAATATCGCCGAAGATTTTCACATAAATGTAGTTAGTGCTTTTTGATGACATGGTACTTTTACTCTACAAACCATTCATCCAATACACTTAATGTGTAAGCTTTGAGTGAAATAACGTTAAGCGATAATGTCGAATTCTGTACCTTTTCACTCTCAGCTCGCCTCCATCATGGAGGTATTGGCTAACGCGGCAGTGGCAGAAATCTGCCAACTTGTAGACGATGGCTATGCCGTGTTGCGCCTTGAAATATCGAGAACTCAGAGCGAAAACCAGGCTTTGAAGAACAAACTACACCTGGTGGAGGTTCGTTCTAGGGAACGATCTGTCAAAAGAAACATCGTACCCCCATTGTCGAGCTGTTTTGGTGCGCAAGGAACAGATCAAGTCGAAGAGAAGCAGTCCCCCAGTGTAAGGAGAAATGGAGGATCCGTGGTGTTGGGGGACAGGAGCACTAGGACTGTCAGTGAAGAGAACCTTGACACGACTGAGCATCCTGAGGTAGTGGTTGTAAAAGAAGAGAAATTGGAAGAGGAGCTGAGGGACTGTGGCTCAAAGCACAACCAGCAACCCAGGAGACTGATTAGTGTGTCTCGGTCTCTTGTTGCTGTGAACGATCAAATCCTGAATGCAGAAACTTCACCTGTGGAGGTAGCTGAGGAGAAGCGGGACGGCGACAACCAGAGGCTCCAACAGACCGCGAACGGGCACAGCACGGCAagccagcacacacacagctcGGACTGTGTGAcatatcagagagagagtcatacagCAGCTGGCCTCTCTCGCATAGAGGATGGTAGAGACATGCTTGATCCATCTTGTTCTTATTTGGTGGAAACGGACTCTATTAAGCCACTTGATGCCCAGCCGCCCTTGACTCCGAGTGGGGTCACAACCTTGTGTGACAGTATGGCTTCCTCTGCCTCACTGGGCTGGAAGCAGGAGGCCGGAGGAGTTGACACTCTTAAAATGGAGGCAGGAATGCCCTCCTGGACAAAAGGGAGGGATATTGGAATGGGCCTGGCTGCTCAGTGTGGAGTTGACATCCCTGGGAAAAACAGGGAGGGTATTCAGCTGGGGAACAGCACAAACGTCTGTCCTCAGAGCAACGTTAACTTAAGGGAGAGCGAGTCATCGGAAGGGCGCAGGTCCAGCGAATCGGATGTAAAAGGATTCGATACCTCCTTAGACTATTTTTTCTCTCCGTCGGAAATGGCCGGGATACAGACTCACCACCGAGGAGACGGCGCTGGAGGCGAGGAGCTGACCTCTTGTCCGTATCCCGGCGACGATGGTTTCGTCAGCCCTTCAAACTCGACACAAGGGGGCCTCCTCTTCTCAAACAGACTGGTCAACTGCCAGGAATGTGGACGGCTGTTCTCCAACTCGCTAGACCTCGCACTTCACCAAAGAATTCACATGGGGGAGAAACTCTTCAGCTGCACCCAGTGTGACAAGCAGTTCCTCCACCTGCACCAGCTCAAGAcccaccagagaatacacaccagGGAGAAACCCTTTAGCTGTTCCCAATGCGGGAAGCGCTTCTCCCAGTCCAGCCACATCAAGAGACACATGAGtgttcacacaggagaaaagcgGTTTGGCTGCAGCGTATGCGGCAAGAGGTTTTCACAATCCTGTAGCCTCAAAGTGCACCAGAGCGTCCACACCGGAGAGAGACCGTTCAGCTGTACTCAGTGCGGGAAGAGTTTCTCTGTGCTCGGGAACCTAATGAGGCACCAGAGTGTCCACAGTAGAACGCAGGATTAAGTCTTGAATAATTAATGGACACTGTATTCTGTTTATATCGTGTTGGTAAAATATTGATATAATGAATTTTGTACATCGTGCACGGTAAACATTGTTGTTTTGTAATAATATCCTGAAAACGGTCTCTTGGTGTGATGTGAacatattaaaacattccccCTGAAAATGAATGTGGAGTTATCATGCTTGTTCAGTGCATTGAATGAAAAACTGCTCCAAGTCACTAAATGATGACTCTATTGCTATTAAACCTACTACTTCATCAAAGGCTGCTCTGCAAACGTGGGTTGTCAAGATTTATTCAATTTTTGGGGGGTAAGGCTATTATGTTT
>XM_036933886.1
acaagatattcaagtgaccgctctaacaatggaaatacatgtcctcaaataTGGAAGGAAGGCTGGAGGTGAGATCAGACTGGACCAAAGCCATGCTTCGTTTAACAAATTCGACACTTATTTCCTCCATACAACAATTCCTCACTTTCGTAAACCGATTTGGGCTGAGTAAAAcgtctcgcttcgcctcttcctctggTATTTATTGCAATTCATACTCCGAGCTGTGAAAGGCAGCAATACGCAACAAAGCGTCTAAATCTGCCGAAAAACCACATGAAGAAGAAGAATCGATATCTCTGGAAACGGCCAACACTTCTTCAACCATTCCGCCAGTAGCTAATTTCCTTCCACTGTCAGGTGTTGAACAACACGCATCAACTTTTGTATTTGTGTAACTATGTCTTTCGAACTTGCCTTTCGTTCTCGTGTTGCCTTCATTATGGAAACCTTGACAGCAACAGCCGTGCAAGACATTTGTCAATTTATGGAAGAAACGTATGCTGCTCTTCGAGTGGAAATGTTGCAAGAACAAAACCGAAGTTCGAGGACAAAATTGCAGGTGATGGAGAATAGCAAGGGGAAGGAAAAGCCTGCGAAAAGTATGGAGAGCGTTCAAGAAGACGGTTTCAGAAACTTCCCAGTCGTGGAGCAAATCCTCAATGAACAAGAGGCCAATGGTCTTTGGCTAGAAGGTCACCTTACTGTTGAAGACAAAGGTCCACCGTCATTGGTATCAGAGGAAGAACAGCCATTGCAGATTTTTGGTCAGATGACAGACAAGGCTGATGAGAGTTGATAACACCATTGGTTGTCTTTTGGAAGGGAGTGGAGACATGTTCAGCACCGCTGCTCATTAAACAGGAGGAAACGGATGATGTCATGGAGTCTCAAGGTTACAGCGGGTGGATGCCAGAGACTCACAAGGCCAACCAGAATATCATAGGAAAaagtgatgaggaagagagaaGTCAAGCCTCTAGGGGATCCAAAGAACTTGGACTCGACGTCTTTAAGAAAGAACAGAGTCTGTTGCTGGTGTCAATTGTGGATGCTGCAGCACCTACAAAGAGGAAGAAATATAACATAAGATACACCTGTAAAATATGTGGAAAGACTGGGACCAAGAAAGGCAGAATGACAAGTCACTTGATAACACACAAAGGGACTTCTAGTTGTGATATTTGTGGTGACAAATTCAAGCATCAGAATGGCTTGACAAAGCACAAGCTACTCAAACACAGTGTGAAAACCTACAGTTGCTTTGTGTGCGGAAAGATGTTTTTATATTCTAAAATACGTGACTACCATGAGCGCATACACGTTGGAGAAGACTACTGGTGCGCGGACTGTGGCAAGACGTTCAAGGAGCGCCAGGATCGCGACATGCACGAGTGCATTGTTTGCAAGGGAGACCGGCCCTACAGCTGCTCCGAGTGCAACAAGGACTTTGAAAGGCAGTACCATCTCAAACAACACCAGCTGGAAAAACACCCTCTAATGGTGGAGCAGACTGTCGAACCAGAACCTGAGTCCAAGGACATTGAGGACCAACAGAGTCAGTTTGAGTCAGCTGAGAGTTCTGAGGCACCCATAAGGAATGAACCGATACAATACACTTGTGAAATATGTGGAAAAACTTGGGCGACTCAAAATAGCATGCGCTCTCACATGTTTATACATAGAAAAATACAAAGGAAACACTATACCTGCGACGTCTGTGGCAAGGTATTTAGGCTCAAATCACCTTTCACCAAACATCAGCTCAGACACAAGGTAGACCTGCCCTTCAGCTGCTCAGAGTGCAACAAGGGCTTTAAAAGTCAGTACCAGCTTAAAAAACACCAGCTTGAAAAGCACCCTCTAAAGGTGGAGCAGCCGTGTTCTGATCTTGTATGGACAGCGACCTGAAGGCCTTTGGTTGGTAAGTTCAGGTCCCACAACCTGAGTTGAACAATGATCGTGGTGATGATGTCTAACGTGTGTTCTGTCTGAGAATGTCAGCTACCATTTATGCTCTTCACTGAACATGACCCAAATAAAATGGCTGTAACTGAATTAACATTTTTAAGTGTAAGAATTTTTGGTTTTAATGTCTCATTTTTTCCCTCATATTTTTGGCTTTGGCAAAATTAGATTTTTCCTTTTGTTTGAAAAGCATCATTTAGGCTTCATTGTTAAATAGCTTGTCGTATTTGAATAAAAACATATCCAGACTTATGTTTCCATTTTATAAACAGGGCAACTATGGAATGAGTGAGCGATTACTGATTTGTAAATACAGAGCAACTTTCTCCACCTGGAACTGAATGTGTTTACTTCTGTGACATGGTGAGTTCTCCTATAGAGGGAGGCGGAATCCGAGTAGAACAGCATCCTAAATCAATTGGGTCGATAAACTGGTATTTACGGTAGACTAACGTCATGACCTCTGCCACCCGGAAGTAAACAATGACATGTTAACGGCTAGCGAGCTGAACACAAACAATATCGCCGAAGATTTTCACATAAATGTAGTTAGTGCTTTTTGATGACATGGTACTTTTACTCTACAAACCATTCATCCAATACACTTAATGTGTAAGCTTTGAGTGAAATAACGTTAAGCGATAATGTCGAATTCTGTACCTTTTCACTCTCAGCTCGCCTCCATCATGGAGGTATTGGCTAACGCGGCAGTGGCAGAAATCTGCCAACTTGTAGACGATGGCTATGCCGTGTTGCGCCTTGAAATATCGAGAACTCAGAGCGAAAACCAGGCTTTGAAGAACAAACTACACCTGGTGGAGGTTCGTTCTAGGGAACGATCTGTCAAAAGAAACATCGTACCCCCATTGTCGAGCTGTTTTGGTGCGCAAGGAACAGATCAAGTCGAAGAGAAGCAGTCCCCCAGTGTAAGGAGAAATGGAGGATCCGTGGTGTTGGGGGACAGGAGCACTAGGACTGTCAGTGAAGAGAACCTTGACACGACTGAGCATCCTGAGGTAGTGGTTGTAAAAGAAGAGAAATTGGAAGAGGAGCTGAGGGACTGTGGCTCAAAGCACAACCAGCAACCCAGGAGACTGATTAGTGTGTCTCGGTCTCTTGTTGCTGTGAACGATCAAATCCTGAATGCAGAAACTTCACCTGTGGAGGTAGCTGAGGAGAAGCGGGACGGCGACAACCAGAGGCTCCAACAGACCGCGAACGGGCACAGCACGGCAagccagcacacacacagctcGGACTGTGTGAcatatcagagagagagtcatacagCAGCTGGCCTCTCTCGCATAGAGGATGGTAGAGACATGCTTGATCCATCTTGTTCTTATTTGGTGGAAACGGACTCTATTAAGCCACTTGATGCCCAGCCGCCCTTGACTCCGAGTGGGGTCACAACCTTGTGTGACAGTATGGCTTCCTCTGCCTCACTGGGCTGGAAGCAGGAGGCCGGAGGAGTTGACACTCTTAAAATGGAGGCAGGAATGCCCTCCTGGACAAAAGGGAGGGATATTGGAATGGGCCTGGCTGCTCAGTGTGGAGTTGACATCCCTGGGAAAAACAGGGAGGGTATTCAGCTGGGGAACAGCACAAACGTCTGTCCTCAGAGCAACGTTAACTTAAGGGAGAGCGAGTCATCGGAAGGGCGCAGGTCCAGCGAATCGGATGTAAAAGGATTCGATACCTCCTTAGACTATTTTTTCTCTCCGTCGGAAATGGCCGGGATACAGACTCACCACCGAGGAGACGGCGCTGGAGGCGAGGAGCTGACCTCTTGTCCGTATCCCGGCGACGATGGTTTCGTCAGCCCTTCAAACTCGACACAAGGGGGCCTCCTCTTCTCAAACAGACTGGTCAACTGCCAGGAATGTGGACGGCTGTTCTCCAACTCGCTAGACCTCGCACTTCACCAAAGAATTCACATGGGGGAGAAACTCTTCAGCTGCACCCAGTGTGACAAGCAGTTCCTCCACCTGCACCAGCTCAAGAcccaccagagaatacacaccagGGAGAAACCCTTTAGCTGTTCCCAATGCGGGAAGCGCTTCTCCCAGTCCAGCCACATCAAGAGACACATGAGtgttcacacaggagaaaagcgGTTTGGCTGCAGCGTATGCGGCAAGAGGTTTTCACAATCCTGTAGCCTCAAAGTGCACCAGAGCGTCCACACCGGAGAGAGACCGTTCAGCTGTACTCAGTGCGGGAAGAGTTTCTCTGTGCTCGGGAACCTAATGAGGCACCAGAGTGTCCACAGTAGAACGCAGGATTAAGTCTTGAATAATTAATGGACACTGTATTCTGTTTATATCGTGTTGGTAAAATATTGATATAATGAATTTTGTACATCGTGCACGGTAAACATTGTTGTTTTGTAATAATATCCTGAAAACGGTCTCTTGGTGTGATGTGAacatattaaaacattccccCTGAAAATGAATGTGGAGTTATCATGCTTGTTCAGTGCATTGAATGAAAAACTGCTCCAAGTCACTAAATGATGACTCTATTGCTATTAAACCTACTACTTCATCAAAGGCTGCTCTGCAAACGTGGGTTGTCAAGATTTATTCAATTTTTGGGGGGTAAGGCTATTATGTTT

Function

NR:

description
zinc finger protein 697-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036933885.1 False 4545 mRNA 0.46 7 72770573 72779896
XM_036933886.1 True 4594 mRNA 0.46 7 72770573 72779904

Neighbor

gene id symbol gene type direction distance location
LOC110534766 LOC106610393 coding downstream 139 72764410 ~ 72770434 (-)
LOC110534773 fgl1 coding downstream 15506 72746969 ~ 72755067 (-)
LOC110497295 LOC106602191 coding downstream 108935 72648336 ~ 72661638 (-)
LOC110534795 LOC106602193 coding downstream 191888 72574190 ~ 72578685 (-)
LOC110534569 sgcz coding downstream 418984 72004823 ~ 72351589 (-)
LOC110534749 LOC106602187 coding upstream 1827 72781731 ~ 72791068 (-)
LOC110534744 LOC106602172 coding upstream 12706 72792610 ~ 72803322 (-)
LOC110534782 LOC106610388 coding upstream 24749 72804653 ~ 72808271 (-)
LOC110534748 LOC106602173 coding upstream 28632 72808536 ~ 72852684 (-)
LOC110534756 LOC106610383 coding upstream 123408 72903312 ~ 72906796 (-)
G923297 NA non-coding downstream 9312 72760482 ~ 72761261 (-)
G923272 NA non-coding downstream 52131 72717609 ~ 72718442 (-)
G923262 NA non-coding downstream 66861 72701759 ~ 72703712 (-)
G923261 NA non-coding downstream 72377 72697018 ~ 72698196 (-)
G923228 NA non-coding downstream 146458 72623644 ~ 72624115 (-)
G923320 LOC106602173 non-coding upstream 87682 72867586 ~ 72868626 (-)
G923326 NA non-coding upstream 104717 72884621 ~ 72885147 (-)
LOC110497284 LOC106602177 non-coding upstream 129880 72909569 ~ 72917849 (-)
G923185 LOC106610383 non-coding upstream 135695 72915599 ~ 72922200 (-)
G923192 LOC106610383 non-coding upstream 145556 72905577 ~ 72928468 (-)
LOC110514144 LOC106602209 other downstream 1006653 71747636 ~ 71765505 (-)
LOC110534950 LOC106595337 other downstream 1022689 71744768 ~ 71752698 (-)
LOC118936746 LOC106602209 other downstream 1107439 71658344 ~ 71665901 (-)
LOC118936934 LOC106597769 other downstream 1173428 71595152 ~ 71597145 (-)
LOC110533203 LOC106610354 other downstream 1689061 71064699 ~ 71121753 (-)
G924041 NA other upstream 850238 73630142 ~ 73631970 (-)
LOC110517287 LOC106601385 other upstream 2137273 74890707 ~ 74932952 (-)
LOC118966654 LOC106597013 other upstream 2158001 74933999 ~ 74970163 (-)
LOC118936366 LOC106566139 other upstream 2273212 75053116 ~ 75056174 (-)

Expression


Co-expression Network