LOC110534756 (LOC106610383)


Basic Information

Item Value
gene id LOC110534756
gene name LOC106610383
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 72903312 ~ 72906796 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036933922.1
CCACAGATAAAAATATATTTACGTTTGAAGCATACCGTGTGAACTTTGAGGACGTTGATTGAACACTGCAATGCAAATTACTATAACATAAGTGTTTAAATTAGACATAGTGCCAAGAACATGACCGATACCGTCGTCTTTCATGCTCAGCTAGCCTCCATCATTGAGGTTTTGGCGAATGCAGCCGTTGCCGAAATCTGCAAACTTGTAGATGACGGGCATGCTGCCTTACGTTTGGAAATTTCCCATAGCCAGAAAGAAATCGATAACCTGCGGAGGAAGCTGCTTTTGACAAAATACCAGAGTTCTCAACGGGGCACAGAGAAATTCGGAGCCCTGCGACGCACAGTTCACTGGCGCGACACCAATCGTGTTGCCCGAGCAAGAGGGAGCTTAGTAGTGGAGAATTGTTTTGCCGACAGTGAAAGTGGCAACTTAACGCAGGATGTCACCAACTGGAGAGATTCAGGACGCACAGCGACAGACCAGGATGGGAGCATGCAGATGGCAGATATGCGAGAGGCACCTCTTATCAAAATGGAGAACCTTGACACCAGTAGAACGGAAGAGATTGTCCAACCAGTCAGTGAGAGCAGTGTGAAGATCATTGTAGCAGAACCAGGTTCTTCATCATCTACTGAACCCACAGACCTTCTGGACCAGCAGGGCAACAGACACAGAGCTCCAGACACCTCACTCAATATAGAACCTGAAAACCAGACGTTCCAGCATCCAGCGTCACAATACAACAGAGCAAGACAGGACCATCAGGTTGCTGAGGGTGTGACCTGGGAAACTGACCATCAACCCATAGAATACAGCCTGTCCCAATGGACAGAGAACCAAGAGACTGACAACCCAACTGTGAATGCTCCTCACAATGCAGGGCCAGACTCCAAGAGGCTGTCTGGACatccagagaggagaggggcgcCAGGTAACTCAGGCGTCAGCATGTCTGCTTCAGGCTCTCTGGACTGGGTGCCTGATGTGGTGATGGTGGACTCAGTTCCCATTAAAGTGGAGGTAGATATGAGTTCAGAATGGAGCATAATTGGCCAAGAGGCGACATCTGGAGAGGTTTGTTCAGAAAGCAGGCAGCTTGTGGAcaacagaggaagagggggaatgGAGTCTGGACAGACAACGTGTCCCCCTGACACTCAACATGCAGAGCAAGGGACAACTGTAGGATCAAGGTCCAAGATGTCAGATTTCAACAGACTGTCCTCCCTAAACAGCTTTTCATCCCCAAGTATTACTCTCCTCCAGGTTCCCCAAAGAGGGAAGCCAGCCCCCTTCCTGAATTTCAACATAAGTACCACTTCTTCATCGAAAGGCATAGAAAAGCAGCAACAACAGCTGACGTCTCACTCGTCCAAGAGTCAGCTCCGGTGCAGCCTCTGTGGAAAGCCCTTCCCCCAGCCGGCGCACCTGCGGAGGCACATGCGGGTCCATACGGGGGAGAAACCGTACGGCTGCAGCCACTGCACCAAGCGCTTCTCCCACAGCCACCAGCTGAAGATGCATGAGAGGGTCCACACCGGAGAGAAACCATTTCATTGCATCTACTGTGGGAAGTGCTTCACCCAGTCTGGCCACATGAAGAAGCACCTCCTCGTCCACACTGGTGGCAGGCCACAGGACGTTGTGCTGCCCTGAGTGTTCCAAGGTGAAGTTCCGACtagatacagatctaggatcagcttcctcttccccaatcctaaccttcaCCACTTGTGGAAAAAGATGCTAAACTTACCCAAcatcagcatctaggggcaacttcacacTTCTCCACCCGGCGTAATGATAGGCAgtgccaggagtttttcctcacCACGTGACAAGACcaaggaaaaactcctggccctagttgTAAGGGGAATGGCTCCACACTACTGGGGTTTTCATATGAACACTGGGTCCATGTGTTTTTAACAGTTTGGATGTTTTCCACATTGAACACGACCCtctgtgtgtagtggttgtgttttcAGTTCAGCTAGCTTAATGCTTGGTCCAGAGTGGATTGATAATGTATAAGTTATTACAGGTGAAGATTTTAAACATCCttatgaatttgtatttgtgCAGGGGTGCACCAAAGAACAGCATTTAAGAATTCAGGAAGCTCTGGACAGGTGCCTGGGTGAGCAAATCCTGTTGGTGGTTGAGAGCCCGTTGCTCGGCTCTTCTCTTACCTGCACgcaggaaagaggaggaaggtTCAGGGAAGAGCGCAACGGTGACCTCTTTTCTGGACATCGACATGGCAGAAGAGCAAAGCGACAGTTTCACGGACACCAACACAGTCCTGGCACTGTAAATGGACATGGTGACCTAGCTGGTGCAAGTAGAGAGAGTGCTGACTGGAATGGTAGGCTGTCAGTGGTTGGGTTTATAGAACTATCTTCATACCCCTTTACCTTCTTCATCATATTCAGCCTCGGAAACCATATGCTGGTTTTTGAGTCCCAGATTTGGAATGAATTGAATTTCAACCCAATCAATTCAATCAGAGTTCTCTCTGGTTTATTCCTTTACATTCTGACTGTTTTGAGCAGGTTTGACAGGTTAGGATGTGCATCATCACTGTAGACCTGGAGTCTTCAACCTTTCCTTGCCCAGGGATCCCCGCCCAGGCAAACCGGCCAACCAGGGATCCCCGCCCAGTCAAACCGGCCAACCAGGGATCCCCGCCCAGTCAAACCGGCCAACCAGGGATCCCCACCCAGTCAAACCGGCCAACCAGGGATCCCCGCCCAGTCAAACCGGCCAACCAGGGATCCCCACCCAGTCAAACCGGCTAACCAGGGATCCCCACCCAGTCAAACCGGCCAACCAGGGATCCCCGCCCAGGCAAACCGGCCAACCAGGGATCCCCACCCAGGCAAACCGGCCAACCAGCGATCCTCATCATATGTTAGCAAAACATTTTTCACATGTCTTATCATCAGGAGAATGGCAGGGAGAagttatcaacattttaaaataaatgtaatttttaAAGAA

Function

NR:

description
B-cell CLL/lymphoma 6 member B protein-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036933922.1 True 3015 mRNA 0.50 4 72903312 72906796

Neighbor

gene id symbol gene type direction distance location
LOC110534748 LOC106602173 coding downstream 50628 72808536 ~ 72852684 (-)
LOC110534782 LOC106610388 coding downstream 95041 72804653 ~ 72808271 (-)
LOC110534744 LOC106602172 coding downstream 99990 72792610 ~ 72803322 (-)
LOC110534749 LOC106602187 coding downstream 112244 72781731 ~ 72791068 (-)
LOC110534754 LOC106610391 coding downstream 123408 72770573 ~ 72779904 (-)
LOC110497284 LOC106602177 coding upstream 2773 72909569 ~ 72917849 (-)
LOC110497281 LOC106610383 coding upstream 13662 72920458 ~ 72924307 (-)
LOC110497279 LOC106602180 coding upstream 18511 72925307 ~ 72931467 (-)
LOC110534758 LOC106602178 coding upstream 27977 72934773 ~ 72938701 (-)
LOC110534797 LOC106610379 coding upstream 39501 72946297 ~ 72949444 (-)
G923326 NA non-coding downstream 18165 72884621 ~ 72885147 (-)
G923320 LOC106602173 non-coding downstream 34686 72867586 ~ 72868626 (-)
G923297 NA non-coding downstream 142051 72760482 ~ 72761261 (-)
G923272 NA non-coding downstream 184870 72717609 ~ 72718442 (-)
G923262 NA non-coding downstream 199600 72701759 ~ 72703712 (-)
G923185 LOC106610383 non-coding upstream 8803 72915599 ~ 72922200 (-)
G923192 LOC106610383 non-coding upstream 18664 72905577 ~ 72928468 (-)
G923334 NA non-coding upstream 25511 72932307 ~ 72932730 (-)
G923335 NA non-coding upstream 26359 72933155 ~ 72933392 (-)
LOC110514144 LOC106602209 other downstream 1139392 71747636 ~ 71765505 (-)
LOC110534950 LOC106595337 other downstream 1155428 71744768 ~ 71752698 (-)
LOC118936746 LOC106602209 other downstream 1240178 71658344 ~ 71665901 (-)
LOC118936934 LOC106597769 other downstream 1306167 71595152 ~ 71597145 (-)
LOC110533203 LOC106610354 other downstream 1821800 71064699 ~ 71121753 (-)
G924041 NA other upstream 723346 73630142 ~ 73631970 (-)
LOC110517287 LOC106601385 other upstream 2010381 74890707 ~ 74932952 (-)
LOC118966654 LOC106597013 other upstream 2031109 74933999 ~ 74970163 (-)
LOC118936366 LOC106566139 other upstream 2146320 75053116 ~ 75056174 (-)
G925211 NA other upstream 2377195 75283991 ~ 75284673 (-)

Expression


Co-expression Network