LOC110497281 (LOC106610383)


Basic Information

Item Value
gene id LOC110497281
gene name LOC106610383
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 72920458 ~ 72924307 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021573312.2
gtaaaaaataaagaaaacccctggaatgcgTAGATgggtccaaactattgactggtactgtattgtgtattacatttaaaatatatatttttctactgtTACATTGTTTAGAATTAGAGTGCATTCTCATTGTGTGCGTCAGTTAACCCGTAGCCTATTCTTTGATTTACTAAGTTTTAACCGCCGGGAACTTATTCGTTTTAGGTTGTATGCctattctgtttttttgtgtagaaCTAAATAGTAAAATAATCATTTTTGGAGGACAAAGTGTGTGTTTGATTAAATTCACTACTTCAATGAAAGTCAAAGAAGGCTGATTTTAAAAAATCGAATAATATTCCTTTCAGTAGCAGCTACAATATGATACAGCAACCGGTAGCAATGTTGGAACTAACATAAGTCGTGTGTAATCAACCTTTATTTTGAAAAACGATCCAGGAAGTAGGTGACATCTTGTTTCCGGAACAAGAAGAGTTGTGTGAAGAAGCGTACAGTTTATGTTGTAAACAGTTAAGTCTTAAGACGTTGATTGAACAATGCAAATTATTATAACATAAGCGTTTAACATAGAGCCAATGAGATGTCCGATACTGTAGCCTTTCATGCTCAGCTAGCCTCCATCATTGAGGTTTTGGCAAATGCAGCCGTTGCCGAAATCTGCAAACTTGTAGATGACGGCCATGCTGCCTTACGGTTGGAAATTTCCCATAGCCAGAAAGAGATCGACAACCTGCGGAGGAAGCTGCTTTTGACAAAATTCCAGAATTCTCGACGGAACGCAGATAAATTGGGAGTCCTGCGACGCACAGTTCACAGGCGCGTGGACACCGATAATTTTACCCGGGCAAGGGCAAGAGAGAGTTTCGTAGAAAAGCCAACAGACAGACTTGGATATTTGCAGAATTGTTTTGCCGACAGTGAAGGGAGCAACTTTACGCAGAATGTAGCCAACTGGAGAGACTCCGGACGCACAGCAACAGACCGGGATTGGGGTATGCAGATGGCAGATATGCAGGAGGCACCTCTTATCAAAATGGAGAACCATGGCACCAGCAGAACAGAAGAGATTGTCCAACCAGTCAGTGAGAGCAGTGAGAAGATCATTGTAGCAGAACCAGGTTCTTCGTCATCTACTGAACCCACAGACCTTCTGGACCAGCAGGGCAACAGACACAGAGCTCCAGACACCTCACTCAATATAGAACCTGAAAACCAGACGTTCCAGCATCCAGCGTCACAATACAACAGAGCAAGACAGGACCATCAGGTTGCTGAGGGGGTGACCTGGGAAACTGACCATCAACCCATAGAATACAGCCTGTCCCAATGGACAGAGAACCAAGAGACTGACAGCCCAACTGTGAATGCTCCTCACAATGCAGGGCCAGACTCCAAGAGGCTGTCTGGACatccagagaggagaggggcaccAGGTAACTCAGGGGTCAGCATGTCTGCTTCAGGCTCTCTGGACTGGCTGCCTGATGTGGTGATGGTGGACTCAGTTCCCATTAAAGTGGAGGCAGATATGAGTTCAGAATGGAGCATAACTGGCCAAGAGGCGACATCTGGAGACATCTGTTCAGATGGCAGACAGCTTGTGGAcaacagaggaagagggggaatgGAGTCTGGACAGACAACGTGTCCCCCTGACACTCAACATGCAGAGCAAGGGACAACTGTAGGGTCAAGGTCCAAGATGTCAGATTTCAATGGACTGTCCACCCAAAACAGATTTTCATCCCCAAGGGTTACTCTCCACCAGGTTCCCCAAAGAGGGAAGCCAGCCCACTTCCCAAATTTCAACAGAGGCTCCACTTCTTCATCGAAAGGCATAGAAAAGCAGCCACAACAGCTGACGTCTCACTCGCCCAAGAGGCAGCTCCGGTGCAGCCTCTGTGGAAAGCCCTTCCACCAGCCGGCGCACCTGCGGAGTCATATGCGGGTCCATACGGGGGAGAAACCGTACGGCTGCAGCCACTGCACCAAGCGCTTCTCCCACAGCCACCAGCTGAAGATGCATGAGAGGGTCCACACCGGAGAGAAACCGTTTCAATGTGTCTACTGTGGGAAGTCCTTCACCCAGTCCGGCAACATGAAGAAGCACCTCCTCGTCCACACTGGTGGCAGGCCACAGGATATTGGGCTGCCCTGAGTGTTCCAGGGTGAAGTGTCCCcttggtacagatctaggatcagcttcctctcCCACAATCTTAACCTTTACCATTAGTAGAaagaaatgctaaactgacccaacatcagtgtctaggggcaatTTAACACTACTCTACCAGGCGTAATGAAATGCAGGGCCAGTAGTTTTTCCTCAGAATGTGACCAGACCGGGGGAAAACTCCTGGTCCTAGTTGTAAGGGCTCCACACTCGTGGGTTTTCATATGAGAACGGAGTCAATGTGTTTTTAACAGTTTGATTGGTTTCCACATTAAACAGTTccggtgtgtagtggtagtgttttAAGTGTACTGGCTTGATGCTTGGTCCAGAGTGGATAGATAATGTATAAGTTATGAAGAAGACTTGATCCCGAGCTAGCCTGATGACTCTCACTAAATCATTCAGCTGCTCTGTCGTTCACGacatactttagtctgagactgcTACCATTGAAGTTGTTTGTGGTGATAAGGGGCACTATGGGTGTTGTACAAAATAAAGTCATCGGTAATTGCATCGTCTCTAACCGATTAAAAGTGTCCATGCCAATGACGAATTTTAGAACCATAGCTTTAATCACGCGTTTTCTGACTCTGGCCCAACCCAATCGGgttctggaccaatcagatggCCCAAAATGTGCTCGCATTCAGTGAAAGGTCGGTGAGGTACTCCGATCTGGACTCATTGCTCTCAAGAACCTGACATCCGAGGGAGTGGTGTAGGGTTTGGCCAGAGCAAAGAGTCTTGATAGCCATGAAAATCCTGAGCCCCAGTAGTATCTGAAAGTAGAATCCAGTACATTGTGGTTACAGCTTCCTGTGAATGACGACATAAACCATTATATTCTTGCTATATGATTGCTGCACTGCATACACCCCTATTACCAATGTAATTATTAGTGCGGTTTGCGAAGCGCGAGACCCCACTTTAAATGTGTCGtactttatattattattatttggaaGGCTACTCCTCtaacaccgtttaagctagaaacgcCATTCAAACTGTAAACGTACAGAGCGGTCAGGACCAATGTGCTTGCGTACAACTTTTTATAGCTTTTGTACTTTTTAAACTACTAAGCTTTTTGTCCCTTATTTACTTCCATAGTTTTTATTCAACATTGTAAAGGTCCCATTGTGACATCAACTCCCAGACTTCCAACATCCATTCACGGTGAATAATGCAACTTTTGACACAAATCTGCAACTTTGACCACATTTCCAGCACTTTAAATAAAAACCTAGAGGGTATGACATTGAGGTCTACTTCTCTGGTATTCAAATCT

Function

NR:

description
zinc finger protein 236-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021573312.2 True 3479 mRNA 0.45 4 72920458 72924307

Neighbor

gene id symbol gene type direction distance location
LOC110497284 LOC106602177 coding downstream 2609 72909569 ~ 72917849 (-)
LOC110534756 LOC106610383 coding downstream 13662 72903312 ~ 72906796 (-)
LOC110534748 LOC106602173 coding downstream 67774 72808536 ~ 72852684 (-)
LOC110534782 LOC106610388 coding downstream 112187 72804653 ~ 72808271 (-)
LOC110534744 LOC106602172 coding downstream 117136 72792610 ~ 72803322 (-)
LOC110497279 LOC106602180 coding upstream 1000 72925307 ~ 72931467 (-)
LOC110534758 LOC106602178 coding upstream 10466 72934773 ~ 72938701 (-)
LOC110534797 LOC106610379 coding upstream 21990 72946297 ~ 72949444 (-)
LOC110534751 ma7d1 coding upstream 25286 72949593 ~ 72954736 (-)
LOC110533208 LOC106602162 coding upstream 31886 72956193 ~ 72960558 (-)
G923326 NA non-coding downstream 35311 72884621 ~ 72885147 (-)
G923320 LOC106602173 non-coding downstream 51832 72867586 ~ 72868626 (-)
G923297 NA non-coding downstream 159197 72760482 ~ 72761261 (-)
G923272 NA non-coding downstream 202016 72717609 ~ 72718442 (-)
G923192 LOC106610383 non-coding upstream 1153 72905577 ~ 72928468 (-)
G923334 NA non-coding upstream 8000 72932307 ~ 72932730 (-)
G923335 NA non-coding upstream 8848 72933155 ~ 72933392 (-)
G923337 NA non-coding upstream 16966 72941273 ~ 72941486 (-)
G923339 NA non-coding upstream 26139 72950446 ~ 72951057 (-)
LOC110514144 LOC106602209 other downstream 1156538 71747636 ~ 71765505 (-)
LOC110534950 LOC106595337 other downstream 1172574 71744768 ~ 71752698 (-)
LOC118936746 LOC106602209 other downstream 1257324 71658344 ~ 71665901 (-)
LOC118936934 LOC106597769 other downstream 1323313 71595152 ~ 71597145 (-)
LOC110533203 LOC106610354 other downstream 1838946 71064699 ~ 71121753 (-)
G924041 NA other upstream 705835 73630142 ~ 73631970 (-)
LOC110517287 LOC106601385 other upstream 1992870 74890707 ~ 74932952 (-)
LOC118966654 LOC106597013 other upstream 2013598 74933999 ~ 74970163 (-)
LOC118936366 LOC106566139 other upstream 2128809 75053116 ~ 75056174 (-)
G925211 NA other upstream 2359684 75283991 ~ 75284673 (-)

Expression


Co-expression Network