LOC110534797 (LOC106610379)


Basic Information

Item Value
gene id LOC110534797
gene name LOC106610379
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 72946297 ~ 72949444 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036933923.1
AGCCAGCCTTTATTTCGGAGAAATTATCCAGGAAGTAGCCGAAAAATGTTTGTTTATAAAAAATAGTGTAACGTCTATGGCCTTAATTGTGTAGTCTCAAGACGTTGACTGAGCACTTAGTTTCAAATTACTATAACATAAGTGTTTAACATAAACATAGTGCTAAGGACATGTACGATACAGTCGCCTTTAACGCTCAGCTAGCCTCCATCGTCGAGGTTTTGGCGAATGCAGCCGTTGCCGAAATCTGCAAACTTGTAGATGACGGCCATGCTGCTTTACGTTTGGAAATTTCCCATAGCCAGAAAGAAATTGATAACCTGCGGAGGAAGCTGCTTTTGACAAAATTCCAGAATTCTCGACGAAGCGCAGAGAAATTCGGAGCCCTCCGACACACGGTCAGCAGGCGGGACACAGATCTTGTTAGCCGGGCAAGAGGGAGCTTCCAAGTGGAGAATCGCTGTGCCGAGCGTAAAGGGAGAAATTTTACGCAGGATGCCACCAACTGGAGAGACGCAGGACTCACAGCGACAGACAAGGATGTGGGCATGCCGATGGCAGATATGCAAGAGATGCCTCTTATCAAAATGGAGAACCTTGCCACCAGCAGCCCGGAAGAGATTGTCCAACCAGTCAGTGAGAGCAGTGAGAAGATCATTGTGCCAGAACCAGGTTCTTCATCATCTACTGAACCCACAGATCTTCTGGACCAGCAGGGCAACAGACACAGAGCTCCAGACACCTCACTCAATATAGAACCTGAAAACCAGACGTTCCAGCATCCAGCGTCACAATACAACAGAGCAAGACAGGACCATCAGGTTGCTGAGGGTGTGACCTGGGAAACTGACCATCAACCCATAGAATACAGCCTGTCCCATTGGACAGAGAACCAAGAGACTGACAACCCAACTGTGAATGCTCCTCATAATTTAGGGCCAGACTCCAAGAGGCTGTCTGAACatccagagaggagaggggtgcctGGTAACTCTGGGGTCTACATGTCTGCTTTGGGCTCTCTGGACTGGGTGCCTGATGTGGTGCTGGTGGACTCAGTTCCCATTAAAGTGGAGGCAGATATGAGTTCAGAATGGAGCATAACTGGCCAAGAGGTGACATCTGGAGAGGTTTGTTCAGACAGCAGGCAGCTTGTGGACAACAGAGGAATGGAGTCTGGACAGACAAAGTGTCCCCCTGACACTCAACATGCGGAGCAAGGGACAACTGTAGGATCAAGGTCCAAGTTGCCAGATTTCAATGGACTGTCCAACCGAAACAGCTTTTCATCCCCAAGGGTTACTCTCCACCAGGTTCCCCGAAGAGGGAAGCCAGTCCACTTCCCGAATTTCAACAGAGGCTCCACTTCTTCACCGAAAGGCATAGAAAAGCAGCCACAACAGCTGACATCTCACTCCACCCAGAGGCAGCTCCGGTGCAGCCTCTGTGGAAAGCCCTTCCCCAAGCCGGCGCACCTGCAGAGGCACATGCGGGTCCATACGGGGGAGAAACCGTACGGCTGCAGCCACTGCACCAAGCGCTTCTCCCACAGCCACCAGCTGAAGATGCATGAGAGGGTGCACACCGGAGAGAAACCGTTTCAATGTGTCTACTGTGGGAAGTGCTTCACCCAGTCTGGCCACATGAAGAAGCATCTCCTTGTCCACACTGGTGGCAGGCCACAGGACATTGTGCTGCCCTGAGTGTtccagggtgaagtttcccctaggtacagatcttggatcagtttcctctccccaatcctaaccttaaacatGTGTCCTTAAAAAATGCAGAACTgccccaagatcagcatctaggggcaacttcacaaTAATGATAGGCAGGGCCAGGAGTTTCCCTCACCATGTGACCAGACCAGGGAATAATTCCTGTCCCTAGTTGTAAGGGGAATGGCTCCACACTATTGGGGTTTTCATATGAAGACTGGGTCcgtgtgtttttgtattgttttattgGAAGTATTTAagttcttgtttttcaatcaacaaacaaaacaatccacattcacagatgtggcagaaataaaaaataaacaaacaacacaTTTGCAGCAGCACTATCCGTGAACGTGTTAGCTATTTCCAGCTTTAACTGAGACAACGAGCAAATAACTTGTTTTTACAgcatgtatatacacacatttctgtccagtttgaaatatagttgagtaGTGGGTCacaagtgagcttttcaagaggaagaaagtcaacaatctggtcaatccacattttaaatgtaggacaGGAATTAGAAGCTCACCTTGgtagaatacatttttttttagcaaaGTATGTGATAGTCATAAACACATTTTCTCTGTTTAGATCAATAACAAAGTCCTGCTAAGCATTAAGAAGATGGccacggggtcatatcaaactaCATCTAATATTTTCTATGCAGCAGTATGTATAGATTGCCAAAATCTGTCCGTCTCCCCGCAATGCCAAAACGCATGCATGTAAGATCCACTTTcagacacaggaggttggtggcaccttaattggggacgacgggctcgtggtaatggctggagcagaattggtggaatggtatcaaacacatgttttCTATGTGCCATTTACTCTATTCCAGTTGTTACAaatcgtcctcccctcagcagcctccactgctttcAGATGTACGTCTTTTACAATCAGGAGAAATGTCTGtattcattctatggagtctcactGTGGTGTAATACAATTTGTACaacattgaaaaaaa

Function

NR:

description
zinc finger protein 37-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036933923.1 True 2754 mRNA 0.47 4 72946297 72949444

Neighbor

gene id symbol gene type direction distance location
LOC110534758 LOC106602178 coding downstream 7596 72934773 ~ 72938701 (-)
LOC110497279 LOC106602180 coding downstream 14830 72925307 ~ 72931467 (-)
LOC110497281 LOC106610383 coding downstream 21990 72920458 ~ 72924307 (-)
LOC110497284 LOC106602177 coding downstream 28448 72909569 ~ 72917849 (-)
LOC110534756 LOC106610383 coding downstream 39501 72903312 ~ 72906796 (-)
LOC110534751 ma7d1 coding upstream 149 72949593 ~ 72954736 (-)
LOC110533208 LOC106602162 coding upstream 6749 72956193 ~ 72960558 (-)
LOC110534768 LOC106610378 coding upstream 18364 72967808 ~ 72973302 (-)
trnae-cuc-11 NA coding upstream 24740 72974184 ~ 72974255 (-)
trnae-cuc-12 NA coding upstream 25779 72975223 ~ 72975294 (-)
G923337 NA non-coding downstream 4811 72941273 ~ 72941486 (-)
G923335 NA non-coding downstream 12905 72933155 ~ 72933392 (-)
G923334 NA non-coding downstream 13567 72932307 ~ 72932730 (-)
G923192 LOC106610383 non-coding downstream 17829 72905577 ~ 72928468 (-)
G923185 LOC106610383 non-coding downstream 24097 72915599 ~ 72922200 (-)
G923339 NA non-coding upstream 1002 72950446 ~ 72951057 (-)
G923353 NA non-coding upstream 15233 72964677 ~ 72967425 (-)
G923360 NA non-coding upstream 29047 72978491 ~ 72978932 (-)
G923365 NA non-coding upstream 94135 73043579 ~ 73043800 (-)
LOC110514144 LOC106602209 other downstream 1182377 71747636 ~ 71765505 (-)
LOC110534950 LOC106595337 other downstream 1198413 71744768 ~ 71752698 (-)
LOC118936746 LOC106602209 other downstream 1283163 71658344 ~ 71665901 (-)
LOC118936934 LOC106597769 other downstream 1349152 71595152 ~ 71597145 (-)
G924041 NA other upstream 680698 73630142 ~ 73631970 (-)
LOC110517287 LOC106601385 other upstream 1967733 74890707 ~ 74932952 (-)
LOC118966654 LOC106597013 other upstream 1988461 74933999 ~ 74970163 (-)
LOC118936366 LOC106566139 other upstream 2103672 75053116 ~ 75056174 (-)
G925211 NA other upstream 2334547 75283991 ~ 75284673 (-)

Expression


Co-expression Network