LOC110534751 (ma7d1)


Basic Information

Item Value
gene id LOC110534751
gene name ma7d1
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 72949593 ~ 72954736 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036933918.1
CTGAACGCTGATCGGATGCGTGCGCAAAGACACAGTTATTAAAGATGGCGGCGCATTGACAACAATCCAGGTATTCTTACAAATATTACTACTTCGTGAACAAGCTGGGGACAAAATCGTTTATTAGACGTTTTGAATTATTTTGAATCGTCATAGCTATCAGTAGTTGTGACCAGGTTTCACAAAAACAAGTGTTTAAAATGTCGGTAACGCGTGTTTTGCATCAACGGATAAGCTCTGTCATGGGCATACTAGCCTCAGCTGCTGTGACCGAGATTTGCAAGTTAGTGGACGATTGCTGTGGAGCGTTACGTGTAGAAGTCTCTCAAAGCAAGGAGCAAATCCTATTGCTAGAGAAGCAACTCAGCCTGGCGGAGTCGAGGTACAAGTCGGTGAGTGGCAAAGGGCTGACGCCTGTCACCGGCGACTCACCAATAATCAACAGTTCGTCGGGCGATTCACCCGCGGCGAATGCCGATGATGCGGACGAAGACGAAGTTAACACTCTTGAGGTGGACGGTGTCAATGGCAATCAGCACGCTCTGTGGAAAGAGGTATCCACAGCACCAACTGATGAGGCTGGGCCCCTCACACTGACCCCTGGCCCCATAGTCAGTTCCAATGAGAACACTGGGCCCCCCGCAATGACCCCTGACCCCATAGTCAGTTCCAGTGACATACCCAGAAAGCAACATATTACCAGTTTCCGAGTTGGTGAAACTCCCAAGATACAACCGTGCACCACGTGCTGCTCCCTCTACCACTGCCCCTTCTGCCGACCGTCTGCGTTCAAACCCAACGAGTTACACCGGATCATCCCACACATCCAGAGCCACCTGAAAAGTGCAGTTCAGAATGACGAGTACATCGTCTACAACTGCAAACTGACGTGCAGAGACTACCCTCACTACCACTGCAGCTATTGTGACCATGTACTCTGCAGAAAAGCGTTGTTTATAGAACATTTCAGAGCTTGCAGAAAGCGGAACGGGACTCAAAGACCTGCCCGTGTCCCAGCTCAATCTGTTGCTCCGCCCCTCCAGCAACATCCCTCTCCAGCCCAGAGACCTCTCGCCCATGCAACATCCACACCTGCCCGTGTCCAAGCTCAATCTCCATCTGTTGCTCCGCCCCTCCAGCAACATCCCTCTCCAGCCCAGAGACCTCTCGCCCATGCAACATCCACACCTGTCCTGCCTCTCACATCTATACCTGCTGTCCCTTCCAGCTccagacctgccacccctccGAGCTTACCAGTCGCTCTTCAAACTctaaacacagacacacctccAATGGAAAAACCAGATGCTTCTGCCAGTCACAATCCGGTCACACGCCAGGATTCGGAACCCTCCTCGCCCGAAGTGTACAGCTGCCCTCCGACGCCGCAGATTGAGACTGAGAGACCGCCAAGACCTTCCCAAAGGGACGCAGTTCCTGTACAGACTCAGTGTGACCACTGCGGCATCATCCTAAACAAGAAGAACTTCAAGGTTCACATGAAGAGGAAACACCACAAAGAGTACGTCGCTGCAGAGAACGAGGAGGCCCTGAGGAGATACCTGGCCGAATCCAAGATGGCCGTGCCACCCTGGTGCCGTGCCACCAAGGTCCAGTGCGATCTCTGCGGAATCAGGCTGAACAAGAAGAATTTCAAGAACCACATGAAGAGGAAACACAAGGTGAACGTGACGGCGTCGGCCTTCCAGGAAGCTTTCGACCGGTGCCTGGGCGAACAAGGCCTGTTGGTGGTCGAGAGCTCGTTGCCCGGCTACACTTATACTAGGACGCAGGAAAGAGGAAGGCGGAGGGAAGAGCGGGACGATGACCTCTTTCCGGACATCGACATGGAAGAAGAACAAAGCGACAGGTTCCCGGACGCCGGCGCACTACTGGCCCAGGAAACGGACCTGGCGACCCAGCAGTTGCAAGGAGAGAGAGTGCTGACTGGAATGAATCCTCAGAGGTACCATGGTCTGGGGAAACCTCATCTCCTGGAGCTTCCTCTTGAGTCGCTGGTGTGGATCTTCCGGGACGTACTGCGTGTGGATGGAAAGAGAGGCTACTGGAACCTGTCTCTGGTCTGCAGAACCTTCAATGCCATCCTGACAAATGAAATCATCAGGAAGTACTCCACGGGGAAGAGATCTGATCCTGAACCCCAGTAGTTACTGAAAGGAGGAGAAGCCAGTACATTGTGCTTACAGGTTACTGTGAATGACATAATGTGCTAATATGCTCACTGCATACACACCTATTACCAATGTTATTACTaccaatgtttattttttttatttacaacgttctcatttattgtaaaaacaaaaagCAAAATGTTATATGTTATCTAGTTGTTTTGCTATCGCTGAGGACTATCTGAAATCCCATTGGCTATTTATTCATTCTATATTCAGATTTTGTATATCTTTTTACTGTTACATTGTTCAGAGTTAGAGTGCGTTCTCAGTGTGGTGCTTCAGTTAGTTTTCAGACTACTAACCCTTAGCCTACTCAATTAAATGACTTTTAATTGAAGGaatgtatttattcctttataatTCAGTTGTATTctgattttgtatttttgtacttGAACTAAATAGTAAAATCATTTTTGGA
>XM_036933919.1
TAAACTTTCTGAACGCTGATCGGATGCGTGCGCAAAGACACAGTTATTAAAGATGGCGGCGCATTGACAACAATCCAGGTATTCTTACAAATATTACTACTTCGTGAACAAGCTGGGGACAAAATCGTTTATTAGACGTTTTGAATTATTTTGAATCGTCATAGCTATCAGTAGTTGTGACCAGGTTTCACAAAAACAAGTGTTTAAAATGTCGGTAACGCGTGTTTTGCATCAACGGATAAGCTCTGTCATGGGCATACTAGCCTCAGCTGCTGTGACCGAGATTTGCAAGTTAGTGGACGATTGCTGTGGAGCGTTACGTGTAGAAGTCTCTCAAAGCAAGGAGCAAATCCTATTGCTAGAGAAGCAACTCAGCCTGGCGGAGTCGAGGTACAAGTCGGTGAGTGGCAAAGGGCTGACGCCTGTCACCGGCGACTCACCAATAATCAACAGTTCGTCGGGCGATTCACCCGCGGCGAATGCCGATGATGCGGACGAAGACGAAGTTAACACTCTTGAGGTGGACGGTGTCAATGGCAATCAGCACGCTCTGTGGAAAGAGGTATCCACAGCACCAACTGATGAGGCTGGGCCCCTCACACTGACCCCTGGCCCCATAGTCAGTTCCAATGAGAACACTGGGCCCCCCGCAATGACCCCTGACCCCATAGTCAGTTCCAGTGACATACCCAGAAAGCAACATATTACCAGTTTCCGAGTTGGTGAAACTCCCAAGATACAACCGTGCACCACGTGCTGCTCCCTCTACCACTGCCCCTTCTGCCGACCGTCTGCGTTCAAACCCAACGAGTTACACCGGATCATCCCACACATCCAGAGCCACCTGAAAAGTGCAGTTCAGAATGACGAGTACATCGTCTACAACTGCAAACTGACGTGCAGAGACTACCCTCACTACCACTGCAGCTATTGTGACCATGTACTCTGCAGAAAAGCGTTGTTTATAGAACATTTCAGAGCTTGCAGAAAGCGGAACGGGACTCAAAGACCTGCCCGTGTCCCAGCTCAATCTGTTGCTCCGCCCCTCCAGCAACATCCCTCTCCAGCCCAGAGACCTCTCGCCCATGCAACATCCACACCTGCCCGTGTCCAAGCTCAATCTCCATCTGTTGCTCCGCCCCTCCAGCAACATCCCTCTCCAGCCCAGAGACCTCTCGCCCATGCAACATCCACACCTGTCCTGCCTCTCACATCTATACCTGCTGTCCCTTCCAGCTccagacctgccacccctccGAGCTTACCAGTCGCTCTTCAAACTctaaacacagacacacctccAATGGAAAAACCAGATGCTTCTGCCAGTCACAATCCGGTCACACGCCAGGATTCGGAACCCTCCTCGCCCGAAGTGTACAGCTGCCCTCCGACGCCGCAGATTGAGACTGAGAGACCGCCAAGACCTTCCCAAAGGGACGCAGTTCCTGTACAGACTCAGTGTGACCACTGCGGCATCATCCTAAACAAGAAGAACTTCAAGGTTCACATGAAGAGGAAACACCACAAAGAGTACGTCGCTGCAGAGAACGAGGAGGCCCTGAGGAGATACCTGGCCGAATCCAAGATGGCCGTGCCACCCTGGTGCCGTGCCACCAAGGTCCAGTGCGATCTCTGCGGAATCAGGCTGAACAAGAAGAATTTCAAGAACCACATGAAGAGGAAACACAAGGTGAACGTGACGGCGTCGGCCTTCCAGGAAGCTTTCGACCGGTGCCTGGGCGAACAAGGCCTGTTGGTGGTCGAGAGCTCGTTGCCCGGCTACACTTATACTAGGACGCAGGAAAGAGGAAGGCGGAGGGAAGAGCGGGACGATGACCTCTTTCCGGACATCGACATGGAAGAAGAACAAAGCGACAGGTTCCCGGACGCCGGCGCACTACTGGCCCAGGAAACGGACCTGGCGACCCAGCAGTTGCAAGGAGAGAGAGTGCTGACTGGAATGGTAAACTGTCAATGgtaggggagagaggtAGGCCAAATGAAAAGACAATGTCTGATTATCTCACTGATTCAATACAACTCAGAGATCAGTACTCTAGAACCTAACTATTCACTAACTTCTTCTTTATTCCCAGAATCCTCAGAGGTACCATGGTCT

Function

NR:

description
uncharacterized protein LOC110534751

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036933918.1 False 2622 mRNA 0.49 7 72949593 72954728
XM_036933919.1 True 2122 mRNA 0.52 5 72951266 72954736

Neighbor

gene id symbol gene type direction distance location
LOC110534797 LOC106610379 coding downstream 149 72946297 ~ 72949444 (-)
LOC110534758 LOC106602178 coding downstream 10892 72934773 ~ 72938701 (-)
LOC110497279 LOC106602180 coding downstream 18126 72925307 ~ 72931467 (-)
LOC110497281 LOC106610383 coding downstream 25286 72920458 ~ 72924307 (-)
LOC110497284 LOC106602177 coding downstream 31744 72909569 ~ 72917849 (-)
LOC110533208 LOC106602162 coding upstream 1457 72956193 ~ 72960558 (-)
LOC110534768 LOC106610378 coding upstream 13072 72967808 ~ 72973302 (-)
trnae-cuc-11 NA coding upstream 19448 72974184 ~ 72974255 (-)
trnae-cuc-12 NA coding upstream 20487 72975223 ~ 72975294 (-)
trnae-cuc-13 NA coding upstream 20668 72975404 ~ 72975475 (-)
G923337 NA non-coding downstream 8107 72941273 ~ 72941486 (-)
G923335 NA non-coding downstream 16201 72933155 ~ 72933392 (-)
G923334 NA non-coding downstream 16863 72932307 ~ 72932730 (-)
G923192 LOC106610383 non-coding downstream 21125 72905577 ~ 72928468 (-)
G923185 LOC106610383 non-coding downstream 27393 72915599 ~ 72922200 (-)
G923353 NA non-coding upstream 9941 72964677 ~ 72967425 (-)
G923360 NA non-coding upstream 23755 72978491 ~ 72978932 (-)
G923365 NA non-coding upstream 88843 73043579 ~ 73043800 (-)
G923366 NA non-coding upstream 125183 73079919 ~ 73080119 (-)
LOC110514144 LOC106602209 other downstream 1185673 71747636 ~ 71765505 (-)
LOC110534950 LOC106595337 other downstream 1201709 71744768 ~ 71752698 (-)
LOC118936746 LOC106602209 other downstream 1286459 71658344 ~ 71665901 (-)
LOC118936934 LOC106597769 other downstream 1352448 71595152 ~ 71597145 (-)
G924041 NA other upstream 675406 73630142 ~ 73631970 (-)
LOC110517287 LOC106601385 other upstream 1962441 74890707 ~ 74932952 (-)
LOC118966654 LOC106597013 other upstream 1983169 74933999 ~ 74970163 (-)
LOC118936366 LOC106566139 other upstream 2098380 75053116 ~ 75056174 (-)
G925211 NA other upstream 2329255 75283991 ~ 75284673 (-)

Expression


Co-expression Network