Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110534768 |
| gene name | LOC106610378 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 72967808 ~ 72973302 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021619715.2 | False | 4642 | mRNA | 0.42 | 4 | 72967808 | 72973302 |
| TU1050172 | True | 745 | lncRNA | 0.39 | 1 | 72967808 | 72968552 |
72,967,000
72,968,000
72,969,000
72,970,000
72,971,000
72,972,000
72,973,000
72,974,000
72,975,000
72,976,000
72,977,000
72,978,000
72,979,000
72,980,000
72,981,000
72,982,000
NC_048574.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110533208 | LOC106602162 | coding | downstream | 7250 | 72956193 ~ 72960558 (-) |
| LOC110534751 | ma7d1 | coding | downstream | 13072 | 72949593 ~ 72954736 (-) |
| LOC110534797 | LOC106610379 | coding | downstream | 18364 | 72946297 ~ 72949444 (-) |
| LOC110534758 | LOC106602178 | coding | downstream | 29107 | 72934773 ~ 72938701 (-) |
| LOC110497279 | LOC106602180 | coding | downstream | 36341 | 72925307 ~ 72931467 (-) |
| trnae-cuc-11 | NA | coding | upstream | 882 | 72974184 ~ 72974255 (-) |
| trnae-cuc-12 | NA | coding | upstream | 1921 | 72975223 ~ 72975294 (-) |
| trnae-cuc-13 | NA | coding | upstream | 2102 | 72975404 ~ 72975475 (-) |
| trnae-cuc-14 | NA | coding | upstream | 2283 | 72975585 ~ 72975656 (-) |
| trnae-cuc-15 | NA | coding | upstream | 3503 | 72976805 ~ 72976876 (-) |
| G923353 | NA | non-coding | downstream | 383 | 72964677 ~ 72967425 (-) |
| G923339 | NA | non-coding | downstream | 16751 | 72950446 ~ 72951057 (-) |
| G923337 | NA | non-coding | downstream | 26322 | 72941273 ~ 72941486 (-) |
| G923335 | NA | non-coding | downstream | 34416 | 72933155 ~ 72933392 (-) |
| G923334 | NA | non-coding | downstream | 35078 | 72932307 ~ 72932730 (-) |
| G923360 | NA | non-coding | upstream | 5189 | 72978491 ~ 72978932 (-) |
| G923365 | NA | non-coding | upstream | 70277 | 73043579 ~ 73043800 (-) |
| G923366 | NA | non-coding | upstream | 106617 | 73079919 ~ 73080119 (-) |
| G923368 | NA | non-coding | upstream | 116320 | 73089622 ~ 73089839 (-) |
| trnae-cuc-157 | NA | non-coding | upstream | 118116 | 73091418 ~ 73091714 (-) |
| G923192 | LOC106610383 | other | downstream | 42074 | 72905577 ~ 72928468 (-) |
| LOC110514144 | LOC106602209 | other | downstream | 1203888 | 71747636 ~ 71765505 (-) |
| LOC110534950 | LOC106595337 | other | downstream | 1219924 | 71744768 ~ 71752698 (-) |
| LOC118936746 | LOC106602209 | other | downstream | 1304674 | 71658344 ~ 71665901 (-) |
| LOC118936934 | LOC106597769 | other | downstream | 1370663 | 71595152 ~ 71597145 (-) |
| G924041 | NA | other | upstream | 656840 | 73630142 ~ 73631970 (-) |
| LOC110517287 | LOC106601385 | other | upstream | 1943875 | 74890707 ~ 74932952 (-) |
| LOC118966654 | LOC106597013 | other | upstream | 1964603 | 74933999 ~ 74970163 (-) |
| LOC118936366 | LOC106566139 | other | upstream | 2079814 | 75053116 ~ 75056174 (-) |
| G925211 | NA | other | upstream | 2310689 | 75283991 ~ 75284673 (-) |
