trnae-cuc-89



Basic Information


Item Value
gene id trnae-cuc-89
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 73043165 ~ 73043236 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>trnae-cuc-89
tccctggtggtctagtggttaggattcggcgctctcaccgccgtggcccgggttcgattcccagtcagggaa

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
trnae-cuc-89 True 72 mRNA 0.63 1 73043165 73043236

Neighbor


gene id symbol gene type direction distance location
trnae-cuc-88 NA coding downstream 971 73042123 ~ 73042194 (-)
trnae-cuc-87 NA coding downstream 2023 73041071 ~ 73041142 (-)
trnae-cuc-86 NA coding downstream 3048 73040046 ~ 73040117 (-)
trnae-cuc-85 NA coding downstream 4073 73039021 ~ 73039092 (-)
trnae-cuc-84 NA coding downstream 5098 73037996 ~ 73038067 (-)
trnae-cuc-90 NA coding upstream 980 73044216 ~ 73044287 (-)
trnae-cuc-91 NA coding upstream 2022 73045258 ~ 73045329 (-)
trnae-cuc-92 NA coding upstream 3929 73047165 ~ 73047236 (-)
trnae-cuc-93 NA coding upstream 4973 73048209 ~ 73048280 (-)
trnae-cuc-94 NA coding upstream 6007 73049243 ~ 73049314 (-)
G923360 NA non-coding downstream 64233 72978491 ~ 72978932 (-)
LOC110534768 LOC106610378 non-coding downstream 74613 72967808 ~ 72973302 (-)
G923353 NA non-coding downstream 75740 72964677 ~ 72967425 (-)
G923339 NA non-coding downstream 92108 72950446 ~ 72951057 (-)
G923337 NA non-coding downstream 101679 72941273 ~ 72941486 (-)
G923365 NA non-coding upstream 343 73043579 ~ 73043800 (-)
G923366 NA non-coding upstream 36683 73079919 ~ 73080119 (-)
G923368 NA non-coding upstream 46386 73089622 ~ 73089839 (-)
trnae-cuc-157 NA non-coding upstream 48182 73091418 ~ 73091714 (-)
G923370 NA non-coding upstream 50014 73093250 ~ 73093632 (-)
G923192 LOC106610383 other downstream 117431 72905577 ~ 72928468 (-)
LOC110514144 LOC106602209 other downstream 1279245 71747636 ~ 71765505 (-)
LOC110534950 LOC106595337 other downstream 1295281 71744768 ~ 71752698 (-)
LOC118936746 LOC106602209 other downstream 1380031 71658344 ~ 71665901 (-)
LOC118936934 LOC106597769 other downstream 1446020 71595152 ~ 71597145 (-)
G924041 NA other upstream 586906 73630142 ~ 73631970 (-)
LOC110517287 LOC106601385 other upstream 1873941 74890707 ~ 74932952 (-)
LOC118966654 LOC106597013 other upstream 1894669 74933999 ~ 74970163 (-)
LOC118936366 LOC106566139 other upstream 2009880 75053116 ~ 75056174 (-)
G925211 NA other upstream 2240755 75283991 ~ 75284673 (-)

Expression



Co-expression Network