LOC110534807


Basic Information

Item Value
gene id LOC110534807
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 73320770 ~ 73348165 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC110534807
ATGTCAAAGGACATCTATGCTGAACCAGATATGAACAAGAAGGTAAAGTTTATCagaggtgagatggaggagaggattgtGGATATCTACGTCAGTGCAGACACCCTGAGAGACGGTGAGACCAGCaccaagagagaagagacagcagacTCTGCTCCTAATAATGCTCGAGGAGACCAGAActcagATAACAGAGCCATTAAAGATTCTGAGGATAAAAGGAACATCTTGTCCCAGAGTTTCTCCCTTTATAAAATCAACACAACttcagagagagaccagctacagaccagatacaacaacctgactgaagaGAAAGGCCATATTCAAGCCAAGCTTTTTGTGATAGAGCAGCATTGTCAGGAGGGATGGAGATACTCTGACTCCAGTTTGTACTTCCTGTCTACTGAGAAGAAAACCTGGGAGGAGAGCAGACAGGACTGTCTGGGgagaggagcagacctgACATTTGTCTTCAACCTCCACCTGAGTGcctggattggtctgactgactctgttactgaGGGGATCTGGAAGTGGGTGGATGGCACAACACTGACCACAGGGTACTGGTGGAAAGGACAGCCTGATAATTATGGGCAGGAGGACTGTGCTGAGATAAACTTTAGTAAAGGTGACCCTGACCAGAACCTGAGTATGGACAGAAAACACAGTAAGTTATTGGAGATGTCTGAAGCCATCTATGCTGAGCCAGATATGAACAAGAAGGTCAAGTTTAACagaggtgagatggaggagaggattgtGGATATCTACGTCAGTGCAGACACCCTGAGAGACGGTGAGACCAGCaccaagagagaagagacagcagacACTGCTCCTAATAATGGACCAGGAGACCAgcactcagTACATGTTCAGTGGTGGGAGAGACCCTCTGGAGttgctgcagtgtgtctggggctgctgtgtgttctcctactggctgggatcataggcCAGTCGTTACAATagagagaccagctacagaccagcaacaacaacctgactaaagagagagaccagctacagaccagttataacaacatgactaaagagagagacaagctacagactgagagagatGAAATTAATGTTAAGCGTATTGTAGAGAAAACCTGTCCTGAAGGCTGGCAGAGGTTTGAATCAAGTTGGTACTTCCTGTCTACTGAGACTAAAACCTGGAAGGAGAGCAGACAGgactgtctggagagaggagcagacctggtgatcataaacagcagagaggaacagGAGTTTCTCTTCAAACTCAATAAGAGAgtctggattggtctgactgactctgaTAATGAGGGGACCTGGAAATGGGTGGACGGCACCCCACTGACCACATGgtactggtgttAA

Function

NR:

description
PREDICTED: CD209 antigen-like protein C

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC110534807 True 1371 mRNA 0.47 11 73320770 73348165

Neighbor

gene id symbol gene type direction distance location
LOC110534743 LOC106602231 coding downstream 10899 73155113 ~ 73309871 (-)
LOC110534772 LOC106610471 coding downstream 172951 73141140 ~ 73147819 (-)
LOC110533210 LOC106602234 coding downstream 185194 73099933 ~ 73135576 (-)
trnae-cuc-164 NA coding downstream 225704 73094995 ~ 73095066 (-)
trnae-cuc-163 NA coding downstream 226927 73093772 ~ 73093843 (-)
LOC118936751 NA coding upstream 13018 73360951 ~ 73363500 (-)
LOC110534783 LOC106610423 coding upstream 22139 73370304 ~ 73373578 (-)
LOC110534778 LOC106610446 coding upstream 95788 73443953 ~ 73446889 (-)
LOC110534518 NA coding upstream 105280 73453445 ~ 73456726 (-)
LOC118936758 LOC106610424 coding upstream 115323 73463414 ~ 73466195 (-)
G923570 NA non-coding downstream 26789 73293736 ~ 73293981 (-)
G923564 NA non-coding downstream 43179 73274217 ~ 73277591 (-)
G923559 NA non-coding downstream 53669 73266884 ~ 73267101 (-)
G923555 NA non-coding downstream 59066 73261140 ~ 73261704 (-)
G923523 NA non-coding downstream 124543 73195852 ~ 73196227 (-)
G923970 NA non-coding upstream 41048 73389213 ~ 73389529 (-)
G923972 NA non-coding upstream 43168 73391333 ~ 73400251 (-)
G923977 NA non-coding upstream 57252 73405417 ~ 73667929 (-)
G923979 NA non-coding upstream 64197 73412362 ~ 73412838 (-)
G923192 LOC106610383 other downstream 395036 72905577 ~ 72928468 (-)
LOC110514144 LOC106602209 other downstream 1556850 71747636 ~ 71765505 (-)
LOC110534950 LOC106595337 other downstream 1572886 71744768 ~ 71752698 (-)
LOC118936746 LOC106602209 other downstream 1657636 71658344 ~ 71665901 (-)
LOC118936934 LOC106597769 other downstream 1723625 71595152 ~ 71597145 (-)
G924041 NA other upstream 281977 73630142 ~ 73631970 (-)
LOC110517287 LOC106601385 other upstream 1569012 74890707 ~ 74932952 (-)
LOC118966654 LOC106597013 other upstream 1589740 74933999 ~ 74970163 (-)
LOC118936366 LOC106566139 other upstream 1704951 75053116 ~ 75056174 (-)
G925211 NA other upstream 1935826 75283991 ~ 75284673 (-)

Expression


Co-expression Network