LOC118936757


Basic Information

Item Value
gene id LOC118936757
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 73497645 ~ 73502828 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036933950.1
CCGGTGGACcaaagacagagagcagcgatGTGCCTGGTGGAGAAGCACATTAGACCAACTACTTAACTACGTGTCAGTACAATTAGaatcatacagtagatattaccattagGAGTCAGTTAGAAAGGTAATCATACCTTAGTTAAGATGGATGACCACATCAACAACCAGGTTATTGAAGAAAAGCAGAAGAGAGCAATGAGGAGAGTGAAGACTGAGACCAATCGCTCAGGACCTGAGGATTCAGGGAGAAGACTCTATAGGATGGTTTCTGTGAGCTTTGGGATGCTGTGTGTTCTACAAGTCACTCTCAACATCTCCCTGAGACTCGTCTATAACAGATGCTTCAAATATtctgaagagagagaccagctacagaccagttacaacaacctgaccaaagagagagaccagctacggATGAGTTACAACAACctaactaaagagagagaccagctacagactgagagagatttTCTTAGCAGGAGGTTTACCAATCTCATAGAACAAACATGTCCTGAAGGCTGGCAGAAGTTTGAATCCAGTTGGTACTTCCTGTCTACTGAGACTAAAACGTGGAATGAGAGCAGAGAGGACTGTCTGAAGAGAGTAGCAGACCTGGTGATCATAACCAGTGATGAGGaacagACGtttctcttcaacctcaagaagagggtctggattggtctgactgactctgttaaTGAGGGGACCTGGAAATGGGTGGACGGCACCCCACTGACCACAAGgtactggtatgaTCCACAGCCTGATAATGGTGGTGGCTATGCAGAACATGGCGAGGAGCACTGTGCTGAAATAAACAAAGTTCACCATCATCTGAAGGCATGGAATGACTTGTCATGTGACAAGAAAATCTACTTTATTTGTGAGCAAGTGATttaacatcaccatgacaacatactgTAACACGTACAGCAGCTTATAGTGCACAgaactttgtctctctctctctctctctctctctctctctacacacctattgttgtatttttttgttgtatcATATTAATAA
>XM_036933951.1
CCGGTGGACcaaagacagagagcagcgatGTGCCTGGTGGAGAAGCACATTAGACCAACTACTTAACTACGTGTCAGTACAATTAGaatcatacagtagatattaccattagGAGTCAGTTAGAAAGGTAATCATACCTTAGTTAAGATGGATGACCACATCAACAACCAGGTTATTGAAGAAAAGCAGAAGAGAGCAATGAGGAGAGTGAAGACTGAGACCAATCGCTCAGGACCTGAGGATTCAGGGAGAAGACTCTATAGGATGGTTTCTGTGAGCTTTGGGATGCTGTGTGTTCTACAAGTCACTCTCAACATCTCCCTGAGACTCGTCTATAACAGATGCTTCAAATATtctgaagagagagaccagctacagaccagttacaacaacctgaccaaagagagagaccagctacggATGAGTTACAACAACctaactaaagagagagaccagctacagactgagagagatttTCTTAGCAGGAGGTTTACCAATCTCAAACAAACATGTCCTGAAGGCTGGCAGAAGTTTGAATCCAGTTGGTACTTCCTGTCTACTGAGACTAAAACGTGGAATGAGAGCAGAGAGGACTGTCTGAAGAGAGTAGCAGACCTGGTGATCATAACCAGTGATGAGGaacagACGtttctcttcaacctcaagaagagggtctggattggtctgactgactctgttaaTGAGGGGACCTGGAAATGGGTGGACGGCACCCCACTGACCACAAGgtactggtatgaTCCACAGCCTGATAATGGTGGTGGCTATGCAGAACATGGCGAGGAGCACTGTGCTGAAATAAACAAAGTTCACCATCATCTGAAGGCATGGAATGACTTGTCATGTGACAAGAAAATCTACTTTATTTGTGAGCAAGTGATttaacatcaccatgacaacatactgTAACACGTACAGCAGCTTATAGTGCACAgaactttgtctctctctctctctctctctctctctctctacacacctattgttgtatttttttgttgtatcATATTAATAA

Function

NR:

description
PREDICTED: CD209 antigen-like protein C

GO: NA

KEGG:

id description
K06561 CD207; CD207 antigen

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036933950.1 False 1036 mRNA 0.44 6 73497645 73502828
XM_036933951.1 True 1033 mRNA 0.44 6 73497645 73502828

Neighbor

gene id symbol gene type direction distance location
LOC118936758 LOC106610424 coding downstream 31450 73463414 ~ 73466195 (-)
LOC110534518 NA coding downstream 40919 73453445 ~ 73456726 (-)
LOC110534778 LOC106610446 coding downstream 50756 73443953 ~ 73446889 (-)
LOC110534783 LOC106610423 coding downstream 124067 73370304 ~ 73373578 (-)
LOC118936751 NA coding downstream 135145 73360951 ~ 73363500 (-)
LOC118936759 LOC106597675 coding upstream 19996 73522824 ~ 73524086 (-)
LOC118936756 NA coding upstream 49237 73552065 ~ 73556782 (-)
LOC118966650 NA coding upstream 64016 73566844 ~ 73569454 (-)
LOC110534806 LOC106610423 coding upstream 73135 73575963 ~ 73579425 (-)
LOC118936371 LOC106610446 coding upstream 146301 73649129 ~ 73652039 (-)
G923944 NA non-coding downstream 29820 73464388 ~ 73467825 (-)
G924003 NA non-coding downstream 30004 73467313 ~ 73467641 (-)
G924001 NA non-coding downstream 33289 73453871 ~ 73464356 (-)
G923995 NA non-coding downstream 58641 73438687 ~ 73439004 (-)
G924015 NA non-coding upstream 3275 73506103 ~ 73510193 (-)
G923957 NA non-coding upstream 7920 73510748 ~ 73514124 (-)
G924048 NA non-coding upstream 156876 73659704 ~ 73664391 (-)
G924057 NA non-coding upstream 184687 73687515 ~ 73735066 (-)
G924096 NA non-coding upstream 305963 73808791 ~ 73844962 (-)
G923192 LOC106610383 other downstream 571911 72905577 ~ 72928468 (-)
LOC110514144 LOC106602209 other downstream 1733725 71747636 ~ 71765505 (-)
LOC110534950 LOC106595337 other downstream 1749761 71744768 ~ 71752698 (-)
LOC118936746 LOC106602209 other downstream 1834511 71658344 ~ 71665901 (-)
LOC118936934 LOC106597769 other downstream 1900500 71595152 ~ 71597145 (-)
G924041 NA other upstream 127314 73630142 ~ 73631970 (-)
LOC110517287 LOC106601385 other upstream 1414349 74890707 ~ 74932952 (-)
LOC118966654 LOC106597013 other upstream 1435077 74933999 ~ 74970163 (-)
LOC118936366 LOC106566139 other upstream 1550288 75053116 ~ 75056174 (-)
G925211 NA other upstream 1781163 75283991 ~ 75284673 (-)

Expression


Co-expression Network