LOC118936756


Basic Information

Item Value
gene id LOC118936756
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 73552065 ~ 73556782 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036933949.1
CCAGTATTGTGTTAATATCACACTGTGGTTGACTGATAAAGAGTTTCACTTCcataaatcacacagacacaggacagtGCAGGGAGAAGACACAGGTACAGATGTACATTAGAGTTGAGGTTAGAAGTAGAAGTTACTGTATTTGACCACCAGTGTGTAAAGATGTCAGAGGGAGTCTATGAAAACCCAGAACCATTTAAAGACGATGAGCCTGATGCAATGAAGAACACAGACATTGATGGCCAATTATATAACAACTTAAGAGCCTTCAAGTCCAGTCCAAGAGATGGAGTTGTTGCTTCAGAGCTTGATAGCTCAGGGAAGAGACCCTCTGGAGTTGCTGCAGTGTttctggggctgctgtgtgttctcctactggctgggatcataggcctgtctgtctactATAACAGAGCCATTAAAGATTCTGAAGATAAAAGGAACATCTTGTCCCAGAGTTTCTCCCTTTTTAAAATCAACACAACttcagagagagaccagctacagaccagctacaacaacctgactgaagaGAAAGGCCATATTCAAGCCAAGCTTTTTGTGATAGAGCAGCATTGTCAGGAGGGATGGAGATACTCTGACTCCAGTTTGTACTTCCTGTCTACTGAGAAGAAAACCTGGGAGGAGAGCAGACAGgactgtctggagagaggagcagacctggtgatcATAAACAGCGATaaggaacagACATTTGTCTTCAACCTCCACCTGAGAGTCTGGATTGGCctgactgactctgttactgaGGGGACCTGGAAGTGGGTGGACGGCACATCACTGACCACAGGGTACTGGGGGAAAGGACAGCCTGATAATTATGGGCAGGAGGACTGTGCTGAGATATACTTTAGAAAAGATGACCCTGTAACAACATGGAATGATGGCAAATGTGGCGCAAATAACAGCTGGATCTGTGAGAAAGTGGTGTAACAAtccctctcgctctatctctctctcatatacagtgtatatatattgattgttggATACAGtgctgaatggttaagtgatgattCCACCTGGTGGTTAAAGTGAAAAGTTGTATTACAGAGTTGCCTACGGGCTCTTTTTCAATGAGACCTTACTCAATTtctcctcacatcctctctcttCGACTCCTTCTCCAAACACATTAGAGAATTCAATCCTAGGGGAGGGACCTTGGACCTTCTCCTCTAATAGGgttgagaaggaggggaggagataggaggagaagagacaggaggagaggaatctAGGCTAATTGAGATAGAGCcttagtgtcagagagagaggaggaagaagaacattaagagaatgaggaagagaaaAAGTGATTGTTGTGTTTAGATTTAGAGGAGaatatgtagacatactgtactCTGTAAAATGCTTCTTCCTTATTTGTATTAGAAACATGTCATGTGATTTGCAGTAGGCTTATgcttagtaaaaaaaaaagtgggacCAATTATTTACCTGTGATTATCACTTTAATAATAAGAATAACAAAGTCACAGATTAATAAATAAAGGAACAATGTTCTTTAACAAGG

Function

NR:

description
CD209 antigen-like protein E

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036933949.1 True 1558 mRNA 0.42 6 73552065 73556782

Neighbor

gene id symbol gene type direction distance location
LOC118936759 LOC106597675 coding downstream 27979 73522824 ~ 73524086 (-)
LOC118936757 NA coding downstream 49237 73497645 ~ 73502828 (-)
LOC118936758 LOC106610424 coding downstream 85870 73463414 ~ 73466195 (-)
LOC110534518 NA coding downstream 95339 73453445 ~ 73456726 (-)
LOC110534778 LOC106610446 coding downstream 105176 73443953 ~ 73446889 (-)
LOC118966650 NA coding upstream 10062 73566844 ~ 73569454 (-)
LOC110534806 LOC106610423 coding upstream 19181 73575963 ~ 73579425 (-)
LOC118936371 LOC106610446 coding upstream 92347 73649129 ~ 73652039 (-)
LOC118966651 LOC106610443 coding upstream 101724 73658506 ~ 73668256 (-)
LOC110534792 LOC106597675 coding upstream 144837 73701619 ~ 73703121 (-)
G923957 NA non-coding downstream 37941 73510748 ~ 73514124 (-)
G924015 NA non-coding downstream 41872 73506103 ~ 73510193 (-)
G923944 NA non-coding downstream 84240 73464388 ~ 73467825 (-)
G924003 NA non-coding downstream 84424 73467313 ~ 73467641 (-)
G924048 NA non-coding upstream 102922 73659704 ~ 73664391 (-)
G924057 NA non-coding upstream 130733 73687515 ~ 73735066 (-)
G924096 NA non-coding upstream 252009 73808791 ~ 73844962 (-)
G924113 NA non-coding upstream 287329 73844111 ~ 73844396 (-)
G924151 NA non-coding upstream 364952 73921734 ~ 73932186 (-)
G923192 LOC106610383 other downstream 626331 72905577 ~ 72928468 (-)
LOC110514144 LOC106602209 other downstream 1788145 71747636 ~ 71765505 (-)
LOC110534950 LOC106595337 other downstream 1804181 71744768 ~ 71752698 (-)
LOC118936746 LOC106602209 other downstream 1888931 71658344 ~ 71665901 (-)
LOC118936934 LOC106597769 other downstream 1954920 71595152 ~ 71597145 (-)
G924041 NA other upstream 73360 73630142 ~ 73631970 (-)
LOC110517287 LOC106601385 other upstream 1360395 74890707 ~ 74932952 (-)
LOC118966654 LOC106597013 other upstream 1381123 74933999 ~ 74970163 (-)
LOC118936366 LOC106566139 other upstream 1496334 75053116 ~ 75056174 (-)
G925211 NA other upstream 1727209 75283991 ~ 75284673 (-)

Expression


Co-expression Network