LOC118966650


Basic Information

Item Value
gene id LOC118966650
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 73566844 ~ 73569454 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036989385.1
ATGTCAGAGGGAGTCTATGAAAACTCAGAACGATTTAAAGACGATGAGCCTGATGCAATGAAGAACACAGACATTGATGGCCAACTATATGCCAACGTAAGAGCCTTCAAACCCAGTACAAGAGATGGAGTTGTTGCTTCAGacaGCAACGTCTCAAAGAATTCATCTGCAGCgatagaccagctacagaccagttataaCACCataactaaagagagagaccagctacagaccagttatagcaacatgactaaagagagagaccagctacagactgagagagatgttcttagcGGCGGGCTTTCCGATCTCAAAAAAACCTGTCCTGAAGGATGGCAGAAGTTAGAATCAAGTTGGTACTTCCTGTCTACTGAGACTAAGACCtggaaggagagcagagaggactgtctggagagaggagcagacctggtgatcATAAAGAGTGATAAggaaaagCCATTTCCCTTCAAACTCAAGAAGAGAgtctggattggtctgactgactctgaTAATGAGGGGACCTGGAAATGGGTGGACGGCACCCCACTGACCACAGGgttctGGTATGATCCACAGCCTGATAATGGTGTGAAGGACTGTGTTGAGATACGCACAGATCAGAGTCCTCTGAAGGCATGGAATTACTTGTCATGTTTGGAGAATCGTCACTGGATTTGTGAGAAAGGTGTttaacatcaccatgacaacatatacatacatacatacaaacacatacagcaGCCTACAGTGCACAGAACTTCCTccttcattctctgtctctgtctctctgtctctgtctctctgtctctgtctctctgtctctgt

Function

NR:

description
CD209 antigen-like protein A isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036989385.1 True 825 mRNA 0.45 5 73566844 73569454

Neighbor

gene id symbol gene type direction distance location
LOC118936756 NA coding downstream 10062 73552065 ~ 73556782 (-)
LOC118936759 LOC106597675 coding downstream 42758 73522824 ~ 73524086 (-)
LOC118936757 NA coding downstream 64016 73497645 ~ 73502828 (-)
LOC118936758 LOC106610424 coding downstream 100649 73463414 ~ 73466195 (-)
LOC110534518 NA coding downstream 110118 73453445 ~ 73456726 (-)
LOC110534806 LOC106610423 coding upstream 6509 73575963 ~ 73579425 (-)
LOC118936371 LOC106610446 coding upstream 79675 73649129 ~ 73652039 (-)
LOC118966651 LOC106610443 coding upstream 89052 73658506 ~ 73668256 (-)
LOC110534792 LOC106597675 coding upstream 132165 73701619 ~ 73703121 (-)
LOC110497274 LOC106610443 coding upstream 164975 73734429 ~ 73735728 (-)
G923957 NA non-coding downstream 52720 73510748 ~ 73514124 (-)
G924015 NA non-coding downstream 56651 73506103 ~ 73510193 (-)
G923944 NA non-coding downstream 99019 73464388 ~ 73467825 (-)
G924003 NA non-coding downstream 99203 73467313 ~ 73467641 (-)
G924048 NA non-coding upstream 90250 73659704 ~ 73664391 (-)
G924057 NA non-coding upstream 118061 73687515 ~ 73735066 (-)
G924096 NA non-coding upstream 239337 73808791 ~ 73844962 (-)
G924113 NA non-coding upstream 274657 73844111 ~ 73844396 (-)
G924151 NA non-coding upstream 352280 73921734 ~ 73932186 (-)
G923192 LOC106610383 other downstream 641110 72905577 ~ 72928468 (-)
LOC110514144 LOC106602209 other downstream 1802924 71747636 ~ 71765505 (-)
LOC110534950 LOC106595337 other downstream 1818960 71744768 ~ 71752698 (-)
LOC118936746 LOC106602209 other downstream 1903710 71658344 ~ 71665901 (-)
LOC118936934 LOC106597769 other downstream 1969699 71595152 ~ 71597145 (-)
G924041 NA other upstream 60688 73630142 ~ 73631970 (-)
LOC110517287 LOC106601385 other upstream 1347723 74890707 ~ 74932952 (-)
LOC118966654 LOC106597013 other upstream 1368451 74933999 ~ 74970163 (-)
LOC118936366 LOC106566139 other upstream 1483662 75053116 ~ 75056174 (-)
G925211 NA other upstream 1714537 75283991 ~ 75284673 (-)

Expression


Co-expression Network