LOC110497274 (LOC106610443)


Basic Information

Item Value
gene id LOC110497274
gene name LOC106610443
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 73734429 ~ 73735728 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036933955.1
accagttacaacaccatgactaaagagagagaccagctacagactgagagagatttTCTTAACTGGAGGCTTACCAATCTCAGCTGGCAGAAGTTTGAATCCAGTTTGTACTTCCTGTCTACTGAGTCCAAAACCTGGAAGGAGAGCAGAAAGGACTGTTTgaagagaggagcagacctggtgatcATAAACAGTGATAAGGAacagACTtttctcttcaacctcaagaagagagtctggattggtctgactgactctgttaaGGAGGGGACCTGGAAATGGGTGGACGGCACCCCACTGACCACGAGgtactggaatGACAAGCAGCCTGATAGTAAAGATCCTACtggggaggaggactgtgttgagatACATACAGATTGGACTCCACTTAAGGCATGGAATGACATGTCATGTGACAGGAAACTCAACTGGATTTGTGAGAAAGTGTTttaacatcaccatgacaacgTACTATAACACATACAGCAGTTTATAGTTTACACAACTTtattcttcattctctctctctctctctctctctctctctctcacacacacactcacacacacacacacactctctctctctctctctatcacacttacacacattttcacacacacccgcacacacacatacatgcaggtACACACACGCATTCAAATGCACCTATTGTTGTAATAGTTTGTTGTATCATATTAATAAAATTCCTACTTTT

Function

NR:

description
C-type lectin domain family 4 member F-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036933955.1 True 722 mRNA 0.43 4 73734429 73735728

Neighbor

gene id symbol gene type direction distance location
LOC110534792 LOC106597675 coding downstream 31308 73701619 ~ 73703121 (-)
LOC118966651 LOC106610443 coding downstream 66173 73658506 ~ 73668256 (-)
LOC118936371 LOC106610446 coding downstream 82390 73649129 ~ 73652039 (-)
LOC110534806 LOC106610423 coding downstream 155004 73575963 ~ 73579425 (-)
LOC118966650 NA coding downstream 164975 73566844 ~ 73569454 (-)
LOC110497266 LOC106610446 coding upstream 7642 73743370 ~ 73746029 (-)
LOC110497275 LOC106610443 coding upstream 55146 73790874 ~ 73813813 (-)
LOC110497261 NA coding upstream 174533 73910261 ~ 73912508 (-)
LOC110534578 LOC106602215 coding upstream 220545 73956273 ~ 73965553 (-)
LOC110515220 NA coding upstream 253041 73988769 ~ 74009226 (-)
G923929 NA non-coding downstream 29452 73345827 ~ 73704977 (-)
G923977 NA non-coding downstream 66500 73405417 ~ 73667929 (-)
G924048 NA non-coding downstream 70038 73659704 ~ 73664391 (-)
G923987 NA non-coding downstream 114220 73419086 ~ 73620209 (-)
G923957 NA non-coding downstream 220305 73510748 ~ 73514124 (-)
G924096 NA non-coding upstream 73063 73808791 ~ 73844962 (-)
G924113 NA non-coding upstream 108383 73844111 ~ 73844396 (-)
G924151 NA non-coding upstream 186006 73921734 ~ 73932186 (-)
G924178 NA non-coding upstream 245296 73981024 ~ 73982172 (-)
G924187 NA non-coding upstream 279511 74015239 ~ 74018490 (-)
G924041 NA other downstream 102459 73630142 ~ 73631970 (-)
G923192 LOC106610383 other downstream 808695 72905577 ~ 72928468 (-)
LOC110514144 LOC106602209 other downstream 1970509 71747636 ~ 71765505 (-)
LOC110534950 LOC106595337 other downstream 1986545 71744768 ~ 71752698 (-)
LOC118936746 LOC106602209 other downstream 2071295 71658344 ~ 71665901 (-)
LOC110517287 LOC106601385 other upstream 1181449 74890707 ~ 74932952 (-)
LOC118966654 LOC106597013 other upstream 1202177 74933999 ~ 74970163 (-)
LOC118936366 LOC106566139 other upstream 1317388 75053116 ~ 75056174 (-)
G925211 NA other upstream 1548263 75283991 ~ 75284673 (-)
LOC110511405 NA other upstream 1756405 75491540 ~ 75494143 (-)

Expression


Co-expression Network