LOC110497266 (LOC106610446)


Basic Information

Item Value
gene id LOC110497266
gene name LOC106610446
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 73743370 ~ 73746029 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036933948.1
ACAGACGCAGAACAGCACAGGGAGACAACACATCTAGATGCACATTAGAGTTGAGGTAAGAAGTAGAAGTTACTGTATTTGACCACCAGTGTGTTAAGATGTCAGAGGGAGTCTATGAAAACCCAGAACCATTTAAAGACGATGAGCCTGATGCTATGAAGAACACAGACATTGATGGCCAAATATATTCCAATGTAAGAGCCTTCAAGCCCAGTCCAAGAGATGGAATTGTTGCTTCAGAACCTGATAGCTCAGGGAAGAGACCCTTCCTAGTTGCcgcagtgtgtctggggctgctgtgtgttctcctactggctgggatcataggcctgtctgtctactATAACAGAGTCATCAAAGATTCTGAGGATAAAAGGAACAACTTGTCACAGAGTTGTTCCCTTTATGAGAATAACGcaactgcagagagagaccagctacagaccagatacaacaacctgactaaagagaaaggTCATATTCAGGCAAAGCTTTTTGTGATGGAGCAGCATTGTCAGGAGGGATGGAGATACTTTGACTCCAGTTTGTACTTCCTCTCTACTGAGAAGAAAACCTGGGAGGAGAGCAGACAGGATTgcaagaggagaggagcagacctcgtgatcataaacagcagagaggaacagACATTTGTCTTTAACCTCCACATGAGAGcctggattggtctgactgactctgtcactgAGGGGACCTGGAAGTGGGTGGACGGCACATCACTGACCACAGGGTACTGGAGCGCAGGACAGCCTGATAATTATGGGCAGGAGGACTGTGCTGAGATATACTTTAGACAAGATGACCCTGTAAAGACATGGAATGATGACAAATGTGGCACAAATCATAACTGGATCTGTGAGAATGTGGTGTAACAATAACACAGTAAcaaaca

Function

NR:

description
CD209 antigen-like protein E isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036933948.1 True 910 mRNA 0.46 6 73743370 73746029

Neighbor

gene id symbol gene type direction distance location
LOC110497274 LOC106610443 coding downstream 7642 73734429 ~ 73735728 (-)
LOC110534792 LOC106597675 coding downstream 40249 73701619 ~ 73703121 (-)
LOC118966651 LOC106610443 coding downstream 75114 73658506 ~ 73668256 (-)
LOC118936371 LOC106610446 coding downstream 91331 73649129 ~ 73652039 (-)
LOC110534806 LOC106610423 coding downstream 163945 73575963 ~ 73579425 (-)
LOC110497275 LOC106610443 coding upstream 44845 73790874 ~ 73813813 (-)
LOC110497261 NA coding upstream 164232 73910261 ~ 73912508 (-)
LOC110534578 LOC106602215 coding upstream 210244 73956273 ~ 73965553 (-)
LOC110515220 NA coding upstream 242740 73988769 ~ 74009226 (-)
LOC110519805 LOC106610455 coding upstream 300454 74046483 ~ 74054724 (-)
G924057 NA non-coding downstream 8304 73687515 ~ 73735066 (-)
G923929 NA non-coding downstream 38393 73345827 ~ 73704977 (-)
G923977 NA non-coding downstream 75441 73405417 ~ 73667929 (-)
G924048 NA non-coding downstream 78979 73659704 ~ 73664391 (-)
G923987 NA non-coding downstream 123161 73419086 ~ 73620209 (-)
G924096 NA non-coding upstream 62762 73808791 ~ 73844962 (-)
G924113 NA non-coding upstream 98082 73844111 ~ 73844396 (-)
G924151 NA non-coding upstream 175705 73921734 ~ 73932186 (-)
G924178 NA non-coding upstream 234995 73981024 ~ 73982172 (-)
G924187 NA non-coding upstream 269210 74015239 ~ 74018490 (-)
G924041 NA other downstream 111400 73630142 ~ 73631970 (-)
G923192 LOC106610383 other downstream 817636 72905577 ~ 72928468 (-)
LOC110514144 LOC106602209 other downstream 1979450 71747636 ~ 71765505 (-)
LOC110534950 LOC106595337 other downstream 1995486 71744768 ~ 71752698 (-)
LOC118936746 LOC106602209 other downstream 2080236 71658344 ~ 71665901 (-)
LOC110517287 LOC106601385 other upstream 1171148 74890707 ~ 74932952 (-)
LOC118966654 LOC106597013 other upstream 1191876 74933999 ~ 74970163 (-)
LOC118936366 LOC106566139 other upstream 1307087 75053116 ~ 75056174 (-)
G925211 NA other upstream 1537962 75283991 ~ 75284673 (-)
LOC110511405 NA other upstream 1746104 75491540 ~ 75494143 (-)

Expression


Co-expression Network