LOC118966652



Basic Information


Item Value
gene id LOC118966652
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 74058166 ~ 74061446 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>LOC118966652
ATGATAATTGTGCCGTGTCCATTTAATCCAACAGAACTCCAACCACAGACACAAAAGGAGGTCTGCATTGTTCTGGTCGGGAAGACTGGCGCTGGGAAAAGTGCATCAGCTTTAGAATCAAGGGTTTCCTCTAATTCTCTGACAAAAAAAAACtgtgaaaaggaaaaagggaaggTGGATAGGCAAAGTGTAGCTGTTATTGACACCCCAGGGTTGTTACATACTACATTACCCAATGAAGAGGCACTGAACGAGATCGctctgtgcatctctctctctctgctcctgctCCCCATATGTTCCTGGTTGTGATCAAGCTGGGAAGATTCACTGAAGAGGGGCAGAAAAACATGGAGATGATTCAGAGATTCTTCGGTGATGAAGCATCGAAATACACCATGGTTGTCTTCACACATGGAGACCTTCTTGATGATGATGGTGTAACAATTGACAACTTCCTGGGTGAAAATCCAAGTTTAGGAAGTTTAGTTTTCAAATTCAATGGGGGATATCATGTCTTCAAAAACAAAGATCAGAATCCCTCCCAGGTCCCTGAGCTCCTTGAGAAGATAAACAAGATGGTGACGATGAATGGAGGAAGTCACTACACCACTGAGATGTTCCAGGAGGCTGAGAGAGCGATTGAAGCGGAGAAGAACAGGATCCTGAGAGACAATGAAGAGAAGatacacagagaggaggagaaactgAAGAAAGACAAAATGAAACAAGAGGCTCACAAGAAAGAGCTTaaagaggagaatgagaggatcCTGTATTGCATAaacctgtccaatcctctcagatctccacctGGCTTACAGGAAGGGGCTAgttag

Function


NR:

description
GTPase IMAP family member 7-like

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
LOC118966652 True 839 mRNA 0.44 2 74058166 74061446

Neighbor


gene id symbol gene type direction distance location
LOC110519805 LOC106610455 coding downstream 3442 74046483 ~ 74054724 (-)
LOC110515220 NA coding downstream 48940 73988769 ~ 74009226 (-)
LOC110534578 LOC106602215 coding downstream 92613 73956273 ~ 73965553 (-)
LOC110497261 NA coding downstream 145658 73910261 ~ 73912508 (-)
LOC110497275 LOC106610443 coding downstream 244353 73790874 ~ 73813813 (-)
trnal-cag-6 NA coding upstream 5271 74066717 ~ 74066799 (-)
LOC110534571 LOC106602206 coding upstream 6914 74068360 ~ 74078768 (-)
LOC118936763 LOC106602222 coding upstream 17869 74079315 ~ 74092648 (-)
LOC118936764 LOC106602208 coding upstream 31741 74093187 ~ 74108411 (-)
LOC118966653 NA coding upstream 51302 74112748 ~ 74113617 (-)
G924204 NA non-coding downstream 8943 74048155 ~ 74049223 (-)
G924187 NA non-coding downstream 39676 74015239 ~ 74018490 (-)
G924178 NA non-coding downstream 75994 73981024 ~ 73982172 (-)
G924151 NA non-coding downstream 125980 73921734 ~ 73932186 (-)
G924096 NA non-coding downstream 213204 73808791 ~ 73844962 (-)
G924240 NA non-coding upstream 69634 74131080 ~ 74131371 (-)
G924248 NA non-coding upstream 84381 74145827 ~ 74146073 (-)
G924442 NA non-coding upstream 143226 74204672 ~ 74209934 (-)
G924486 NA non-coding upstream 244496 74305942 ~ 74391812 (-)
G924490 NA non-coding upstream 337201 74398647 ~ 74404518 (-)
G924041 NA other downstream 426196 73630142 ~ 73631970 (-)
G923192 LOC106610383 other downstream 1132432 72905577 ~ 72928468 (-)
LOC110514144 LOC106602209 other downstream 2294246 71747636 ~ 71765505 (-)
LOC110534950 LOC106595337 other downstream 2310282 71744768 ~ 71752698 (-)
LOC118936746 LOC106602209 other downstream 2395032 71658344 ~ 71665901 (-)
LOC110517287 LOC106601385 other upstream 855731 74890707 ~ 74932952 (-)
LOC118966654 LOC106597013 other upstream 876459 74933999 ~ 74970163 (-)
LOC118936366 LOC106566139 other upstream 991670 75053116 ~ 75056174 (-)
G925211 NA other upstream 1222545 75283991 ~ 75284673 (-)
LOC110511405 NA other upstream 1430687 75491540 ~ 75494143 (-)

Expression



Co-expression Network