LOC110534573


Basic Information

Item Value
gene id LOC110534573
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 74060319 ~ 74062933 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036933969.1
ccctttttggttactacatgattccatgtgtgttatttcatagtttttatgtctttattatttATCTACAAAGTAgcaaatagtaaaaagaaagaaagatcTTGGAATGATAGTTCTTCCACTAAAttcatttttgtacatttttcaGTAGACATTGTTTAAAGTAGCCCTTGTTCAGCAGGTTATGTTGTTTGTTCAACTTTGATTTAAattgtttttgtttggcatatatTTTCTAAGTGAAAAAAACGGAGTCAAAGCGTAGTTCTGTTTCTGTGGAATTGCCCCTCTGGAAATGACTTTTTCTCTTCGCATGAAACTGTGAGGTTGTATCCTAACCTGTAAATAAATATAAGCCTGACCAAGCCAAATTCTAGCGCATTCCAAGCTTCTCGTAGATGGTGTTGATTCAAATCTGGTTGTTTTTCCCCATACTAAAAGTGAACCCATGGCTTTATGGTTGGATTATCCTTGGTAAAATAGAAGAGCAGACAAGCAAGGAGGACAATGATGTCTGTATCCAGTTTCTTAAAGTCAGAGAACTTACATGGAAGTTGGTTCTCTCCCCAACATTCTTTCAGATGCCTTTTCCTTGCTTCTCTCtcgtagattttttttttttagagatcTTCTCTCTATGTGTCCCACACAATATCGATTACATTACACTTTTTCAACTGGTGCTCTACCCAAGGCAGCAAGAGACTGCTGCCATATTTGCCTAATGTGGAAACTTAGTCTGTAGGCTTATTTAGGAAGTTACCTGTAGATAATGTCATTGTTAATTTGCTTAGAGTTTGTATTTTATAGACCAATAATGTAAGTCTAAGAAACAATGTGAGACTGAAAATATAGCATTAGTAGCTGTTCTATAAGATGCCCAAACAGAAAGAACATCAACATCACATTTCTCTCTACATTAGCAACATTTCCTTCTGATCCAAAAGAGACCTGGATTGCTCTGGTTGGGAACACTAGACCTGGTAAGAGCTTGACAGCATTCCAAAACCCAAACATGACTGCTGAGTACTTTGTCTTAATTTCACTGTACAATACAGTGATGGAAACTGATTTGGGCTGTTCTaccttttttatttgatttttgttACGGGTTACCACAATTATCATTCCAGACAAGGAATGGGCTAAATTACAGCGTCATTTGTGTGCTTGTCAGAACACTACTGTTAATCTCCATACGTTTAATATTTCTCCACTTCCCAGTTTTGTCGGTGCAACAACCATAAGTCTGATATGCCTAGTTGTGTctttgaaaataaatacatgtgatgaAGCATTTTCATCTCAGCTATGTCCTCTGCAGTGTTGATTAGTTGCTGAATACAACTGACTTGTGATGTTTTAATTTCACCCAGTTCATGGGCCTCCCATGAACAGTGAACAGCTGATTTTACAACAAAAACACTATACAGCAACAACTTTCCCTTATTATCCAAGAGAGAACCGGATTGTGCTGGTGGGGAAGACTGGAGCTGGGAAGAGTGCAGCAGGAAACACCATCCTGGGGAAGAAAGTGTTAAAATCACATTCACATTCCAACTCTGTGACTAAAGACTTTgataaggaaagagagatggtgtGTGGGCAACGTGTGGCTGTTATTGACACCCCAGTGTTTGACACAAAGTTTACACAGGAGGAAGCAATAGAAAATATCACAATGTGCGTCAACCTCTCTTCTCCTGGTCCCCATGTGTTCCTGATTGTGATCAAGCTGGGAAGATTCACTGAAGAAGAGCAGAAAGCAGTGCAAATGATTCCACTCTTCAGTGCTGAAGCATCAAAATACACAATTGTTCTCTTCACACATGGAAACCTCCTTGAGGATGTAACGATTAAAGAATTAGTGTCTGGAACACAAAATGTAGTAAGCTTAGTTGACCAATGCAAGGAGGGATTTCATGTCTCCAACAACAAAGATAAGAGTCGCTCCCAGGTCACTGAGCTGCTTGAGAAGATAAACAAGATGGTGAAGATGAATGGAGGAAGCCACTACACCACGGAGATGTTCCAGGAGGCTGAGAGAGCGATTGAAGAGGAGAAGAACAGGATCCTTGGAGAGAACaaagagaagagaaacagagaggatgagAAACTGAATAATTTTTTTGAAGGAGAGGCTCTGGAGAAAGCAAGAAAGGAGCTGAGAGAAAAACATGAAAGAGAGGCTCGAGAGAAAGCTGAAAGAAATACAGCTGGGCGTTATCTTGCTGTTGTAGGTTCTGCTGCTGCAGGTGGAGCTGCTATTGGAGCTGCTATTGCATTACCAGTTGGTGCAGCAGTGGGTGCAATAGTAGGAGGTGTAGCAGGAGCAATAGAGGTGTTTTTGAAACCAATGTTTGCTGTATATGATACAAAATAATTTATTTGACTTGACTGCTTAGATATTCAACGTAATTGGACATGGATATCAGTACATCTTCTGACTTTTCGCTTAGTGTCTCTTCATCTTGCCTGTTCCAGGGTTGACGGTCAAACAACTTCCACCATCTGTaactactgctgtaaacagactaATTGACTTGAACATGTTTTAATATGTTTAGATCGAATGATCTATGTGAAATGGTATTGGCCAGAGGGAAGTAAG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036933969.1 True 2611 mRNA 0.39 3 74060319 74062933

Neighbor

gene id symbol gene type direction distance location
LOC118936762 NA coding upstream 52503 73987940 ~ 74007816 (+)
LOC110497264 LOC106602228 coding upstream 150204 73860326 ~ 73910115 (+)
LOC110497270 LOC106610441 coding upstream 201273 73847000 ~ 73859046 (+)
LOC110497273 LOC106602230 coding upstream 223398 73836107 ~ 73836921 (+)
LOC110497272 LOC106610442 coding upstream 242107 73814175 ~ 73818212 (+)
LOC110534587 LOC106610436 coding downstream 309934 74372867 ~ 74400008 (+)
LOC118936935 LOC106610453 coding downstream 566556 74629489 ~ 74633280 (+)
LOC110498618 NA coding downstream 708799 74771732 ~ 74772542 (+)
LOC110516094 NA coding downstream 1170504 75233437 ~ 75240014 (+)
LOC118966655 LOC106609853 coding downstream 1200189 75263122 ~ 75267375 (+)
G923817 NA non-coding upstream 127485 73927912 ~ 73932834 (+)
G923627 NA non-coding upstream 240785 73764151 ~ 73819534 (+)
G923616 NA non-coding upstream 251503 73808352 ~ 73808816 (+)
G923755 NA non-coding upstream 271025 73784484 ~ 73789294 (+)
G923692 NA non-coding upstream 473524 73586501 ~ 73586795 (+)
G923877 NA non-coding downstream 2960 74065893 ~ 74066159 (+)
G923884 LOC106602222 non-coding downstream 22253 74085186 ~ 74086633 (+)
G923888 NA non-coding downstream 29364 74092297 ~ 74110278 (+)
G923902 NA non-coding downstream 56374 74119307 ~ 74119743 (+)
G923903 NA non-coding downstream 58410 74121343 ~ 74121551 (+)
G923659 NA other upstream 379434 73483851 ~ 73680885 (+)
G923434 NA other upstream 844861 73214487 ~ 73215458 (+)
G923430 NA other upstream 856795 73200947 ~ 73203524 (+)
LOC118936484 LOC106602173 other upstream 1187517 72856302 ~ 72879600 (+)
G923075 LOC106610393 other upstream 1294100 72764442 ~ 72766219 (+)
G924772 NA other downstream 1041684 75104617 ~ 75104970 (+)
G924787 NA other downstream 1124322 75187255 ~ 75189231 (+)
G924816 LOC106601384 other downstream 1179539 75242472 ~ 75243001 (+)
LOC110511403 LOC106610548 other downstream 1360551 75423434 ~ 75481518 (+)
G924916 NA other downstream 1460425 75523358 ~ 75525800 (+)

Expression


Co-expression Network