LOC110497259


Basic Information

Item Value
gene id LOC110497259
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 74758689 ~ 74760648 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021573272.2
tggcgatgtgcgtCTTTTAGGTTCAGGCGACGCTGCCAGTGTGACGTATAATTTAGTGGACGGGACGCTCCTTCAACAACAACAGTTAGACACCTCGGTAGCTTTATAGCAAACATAGCTACAACATTCACTCTCTTTACACTGTTTTGGTGTACATTAGTCGCTGTGTATTAAACACACTTCTGTCGTATGTACGTGTTGGCCCATTTAATTATATATTTACGTTGTTTGTCAGCTAGCTGGTTTGCTAAATTAGCTTAGAACTAGGCTAgttgctaatgctagctagcgaaCATCtccgaccatgagttcactaagctactctcctcctgctaaagaagaggaggtcttctggacggagaaagaagctctcctgaaagaggaggaggaagagaaggatgttacaatacaaaaacaagtagagggtgaggctgttaccgtgaaagaagaagagaaagacgtttcagtgaaagaaaaGGAAGTctcgttcagagtgaaagaggaggaggatgttacagtaaaagaagaggaagcggagagagaggaggatgcagtttatggagtgaaagagggggagggggagatgactgtcacatcgaaaaaggaggaggaggacgaagaGGAAACTGGacatctgggcccggtttccccaACGCATCTTAACGCATCCTATGGTTCTAACGGTGAACTTAGCCGTAAAATGGTTTTGAGAAACCGGGCCGtgattaacactagagagagatgtgactatcgtggatcctctggggagcctcaacaacatcatgaaGCTGACGGGGCAGAGAAGAGTCCCTCCCgatcagaacacctcaagaaacaccagTGGAGACCAACAGGGAAGAAATcgcactgctgctctgactgtgggaagagttactTAAGATCAAATTCACTAAAAGTACACATGagaattcacactggagagaaaccttatagctgtgatcaatgtggaaagagttttactacatctagccATCGGattgtacaccagagaacacacgcaggagagaaaccttatagctgtgatcaatgtgggaagagttttactcagtcaagcAGCTTGTTAtctcaccagagaacacacacaggagagaaaccttacagctGTTATCAATGTGGGAAGAATTTTACTCAGTCAAGCAACCtggtatcacaccagagaacacacacaggagagaaacctcataGTTGTGAACAATGTGGGAAGAATTTTACTACATCCAGCCATCTGattatacaccagagaacacacacaggagagaaaccttatagctgtgaacAATGTGGGAATAATTTTACTACATCTAGTCATCTGattatacaccagagaacacacacaggagagaaacctcctagctgtgatcaatgtgacaagagatactctgataaaagatctctgatcaaacatcagaaaatacattaatgatggagttgtttcatgatatcaatgaattaatgtc

Function

NR:

description
zinc finger protein 239-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021573272.2 True 1478 mRNA 0.44 2 74758689 74760648

Neighbor

gene id symbol gene type direction distance location
LOC118936766 NA coding downstream 50965 74696063 ~ 74707724 (-)
LOC118936765 LOC106592562 coding downstream 81863 74674780 ~ 74676826 (-)
LOC118966653 NA coding downstream 645072 74112748 ~ 74113617 (-)
LOC118936764 LOC106602208 coding downstream 650278 74093187 ~ 74108411 (-)
LOC118936763 LOC106602222 coding downstream 666041 74079315 ~ 74092648 (-)
LOC110518241 LOC106592562 coding upstream 5340 74765988 ~ 74768163 (-)
LOC110511351 LOC106597013 coding upstream 64538 74825186 ~ 74877445 (-)
LOC118936768 NA coding upstream 134086 74894734 ~ 74910153 (-)
LOC110517287 LOC106601385 coding upstream 155708 74890707 ~ 74932952 (-)
LOC118966654 LOC106597013 coding upstream 173351 74933999 ~ 74970163 (-)
G925024 NA non-coding downstream 26292 74689551 ~ 74732397 (-)
G925034 NA non-coding downstream 39588 74718249 ~ 74719101 (-)
G924995 NA non-coding downstream 105086 74652525 ~ 74653603 (-)
G924997 NA non-coding downstream 107332 74646413 ~ 74651357 (-)
G924587 NA non-coding downstream 194674 74563612 ~ 74564015 (-)
G925053 NA non-coding upstream 21045 74781693 ~ 74841885 (-)
G925010 NA non-coding upstream 46998 74807646 ~ 74808854 (-)
G925069 NA non-coding upstream 62345 74822993 ~ 74823300 (-)
G925071 NA non-coding upstream 70981 74831629 ~ 74832660 (-)
G925075 NA non-coding upstream 82359 74843007 ~ 75031349 (-)
G924041 NA other downstream 1126719 73630142 ~ 73631970 (-)
G923192 LOC106610383 other downstream 1832955 72905577 ~ 72928468 (-)
LOC110514144 LOC106602209 other downstream 2994769 71747636 ~ 71765505 (-)
LOC110534950 LOC106595337 other downstream 3010805 71744768 ~ 71752698 (-)
LOC118936746 LOC106602209 other downstream 3095555 71658344 ~ 71665901 (-)
LOC118936366 LOC106566139 other upstream 292468 75053116 ~ 75056174 (-)
G925211 NA other upstream 523343 75283991 ~ 75284673 (-)
LOC110511405 NA other upstream 731485 75491540 ~ 75494143 (-)

Expression


Co-expression Network