LOC110518241 (LOC106592562)


Basic Information

Item Value
gene id LOC110518241
gene name LOC106592562
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 74765988 ~ 74768163 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036933982.1
CGCTTCTTCAACAACATCTAGTCAGCCACCTCGGTAGCTTCCTAGCGGGACGTTCAAGCTGTTCAGACTGCTTCGGTCTATATTTACTTCTGTATTTGGAACATAATTCTGTCTTTTAACTAGTTTCCCCATTTCATGTCATATTTCTGTTTAGTCAGGTAACGGTAGCTGGCTTGATAAATGAACCTAtcactaggctagtcgctaactagctaggttagctggctaacatccccgaccatgagcTCAGCAAGCTACTGCCCTCCTGCTAAAAAAGAGGTCTGCTGGAAGGAGAAAGAAGGTATTTGGCTGAACGTTGTCGTGAAAGAGGAGACTGAAGAGGAGGATGTCACAGTAAACgaagaagtagagggtgaggctgttacacagaaagaagaggaagaaaacGATTATACTTTTTTTGGAGTGAATGAAGGAGAGATAACTGTCATattgaaggaggaggagagggaagaagagaaggagacagaagatcTGAGTAACACCAgagagagaccagactctcCTTCTGACAGCAGGAAGAGTCCTTCAGGGAAACCAGACCCCGAGACGTCCAAACCAGCAGGACGAcatcactgctcccagtgtggaaagagttttactcagttagGGAGCCTGAGAACACATAagagaatacacactggagagaagccttaccactgttccCAATGTGGAATGTCGTTTACCCAGTTAGGGAGCCTGCAAACGCATGAGAGGGGACACACAGGGGAAAAGCTTTTCCAATGttcccattgtggaaagagttttggcCAGGTAGGAAACCTGAACaagcatgagaggacacacacaggtaagAAGATGTAccgctgctcccagtgtggagagAGATTTACCCGGTTAAGGTACCTGAAAGAGCATGAAAgaatacatacaaatacacaggaggagaagacataccactgctctcactgtggaaagacattttcccagtcagagaaCCTGAAAACACATGAGAGAATCGAGAGGCTGTGTTCTGACTTGTGTTTTTGactgagaatgtgtgtgtttgtttgggcTGTCAGACTTGAGTCCACTTCGTATAATgttagtgcactatttttaatTGTGATTAATCCATTGTCTCAAAGGGTTGAAAACACACTGAAAACATCCAGAATACATCCTATATACAGCTAAAATCTACAATGCCATGTAAACTCAAGATGACATTGAGGTTAAATAAAGTGTGATTTATCAATGGAACATATTTTGACACGTccactgtgtgtctctgtagagTCATAATATCCATAACAACTAGAGGTCAAACAGGGAGATGGTTCCATTCATTTTCCCCACAGGGCTGTGTTTTGTTTAGACTCACCCTGGTG

Function

NR:

description
gastrula zinc finger protein XlCGF49.1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036933982.1 True 1373 mRNA 0.44 2 74765988 74768163

Neighbor

gene id symbol gene type direction distance location
LOC110497259 NA coding downstream 5340 74758689 ~ 74760648 (-)
LOC118936766 NA coding downstream 58264 74696063 ~ 74707724 (-)
LOC118936765 LOC106592562 coding downstream 89162 74674780 ~ 74676826 (-)
LOC118966653 NA coding downstream 652371 74112748 ~ 74113617 (-)
LOC118936764 LOC106602208 coding downstream 657577 74093187 ~ 74108411 (-)
LOC110511351 LOC106597013 coding upstream 57023 74825186 ~ 74877445 (-)
LOC118936768 NA coding upstream 126571 74894734 ~ 74910153 (-)
LOC110517287 LOC106601385 coding upstream 148193 74890707 ~ 74932952 (-)
LOC118966654 LOC106597013 coding upstream 165836 74933999 ~ 74970163 (-)
LOC110516473 LOC106591540 coding upstream 267567 75035730 ~ 75085676 (-)
G925024 NA non-coding downstream 33591 74689551 ~ 74732397 (-)
G925034 NA non-coding downstream 46887 74718249 ~ 74719101 (-)
G924995 NA non-coding downstream 112385 74652525 ~ 74653603 (-)
G924997 NA non-coding downstream 114631 74646413 ~ 74651357 (-)
G924587 NA non-coding downstream 201973 74563612 ~ 74564015 (-)
G925053 NA non-coding upstream 13530 74781693 ~ 74841885 (-)
G925010 NA non-coding upstream 39483 74807646 ~ 74808854 (-)
G925069 NA non-coding upstream 54830 74822993 ~ 74823300 (-)
G925071 NA non-coding upstream 63466 74831629 ~ 74832660 (-)
G925075 NA non-coding upstream 74844 74843007 ~ 75031349 (-)
G924041 NA other downstream 1134018 73630142 ~ 73631970 (-)
G923192 LOC106610383 other downstream 1840254 72905577 ~ 72928468 (-)
LOC110514144 LOC106602209 other downstream 3002068 71747636 ~ 71765505 (-)
LOC110534950 LOC106595337 other downstream 3018104 71744768 ~ 71752698 (-)
LOC118936746 LOC106602209 other downstream 3102854 71658344 ~ 71665901 (-)
LOC118936366 LOC106566139 other upstream 284953 75053116 ~ 75056174 (-)
G925211 NA other upstream 515828 75283991 ~ 75284673 (-)
LOC110511405 NA other upstream 723970 75491540 ~ 75494143 (-)

Expression


Co-expression Network