LOC110511351 (LOC106597013)


Basic Information

Item Value
gene id LOC110511351
gene name LOC106597013
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 74825186 ~ 74877445 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036933977.1
gggtgtccacatacttttgtatatatagtgtatgtacacaTGGGTGTTGTTGCACCATACCAACGATAAGCCTGTCTTCCCCATCACATCATGAAAGGTCATGTTGATGTTCATTtaacctctgcctctctcttcctctgactcctccctttctcatttgtttctctctttctctctgtctctttctctctctttctcctctgtctctctctttctcctcagatctCCAGGCTCAAAGCGTCAGTCCACCAGCTGAAGACTCAGTCAGACTGGTGAATGGGACCACTTCCTGTTCTGGGATAGTGGAAGTCTTCTATGAAGGAGAGTGGTTGGGTCTATGTTTTAGGTGGTGGAGAATGATGAGAGATGCTAATATTGTGTGTAGAGAGCTGGACTGTGGGAATCCTGTATCTGAATCTAGAGGACCTCTGATTGAAGATGGAAGAAGAGGAGTCACGATGTGGAGATGTAGGAGAGATGAGTCTTCTATTAGATGGTGTAACATCATAGGAGGACCTGGTGTCTGTGATGGTGGATATTATCGTCATGTGACCTGTTCAGagtctgtgcggcttgtggatggagctggtctctgctctgggagagtggaggtgaagtccaatcagtcctgggcctcagtgtgtgaagctgaCTTTGACCGGCAGGATGCAGAGGTAGTCTGTGGGGAGCTTGGCTGTGGggctcctgcagctctacagggggggctctatggagaaggtgagggtcagacctgggataaagagttccagtgtaaaggcaaagagtcccttctcctggactgtgacacctcagacagaaaacacaacacctgcctacctggtaatgctgttggactcacctgctcagagcctgatgatgtgaggctggtgggaggagacagtcgctgtgctggtggagtggagtggtacgaccagggagagtggaggactgTGGGATCTTTCTCTGACGTGATGTCTATAGctgtagtagtgtgtagacaTATGGGTTGTGGCTCCACTGTTTCAGCACTACCTGGAAACACCACTAGAGGGTTTGGAGTTTCCTGTTCTGGGTCTGAGTCTTCACTGAGGGAGTGTAGAAGAATGCATGATCTCcttcctggactcacagtgatctgctcagagtctgtgcggcttgtggatggagctggtctctgctctgggagagtggaggtgaagtccaatcagtcctgggcctcagtgtgtgaagctgaCTTTGACCTGCAGGATGCAGAGGTAGTCTGTGGGGAGCTTGGCTGTGGggctcctgcagctctacagggggggctctatggagaaggtgagggtcagacctgggataaagagttccagtgtaaaggcaatgagtcccttctcctggactgtgacacctcagacagagagaacaacacctgcctacctggtaatgctgttggactcacctgctcagagcctgatgatgtgaggctggtgggaggagacaGTCGCTGTGCTGGTGTAGTGGAGCTGTTCAaccagggagagtggaggactgTGGGAACTGCTGACAGGACCAGGATGTTTTTGTctgcagtagtgtgtagacagatgGGTTGTGGCTCCACTGTTTCAGTACTACCTGGAAACACCACTAGAGGGTTTGGAGTTACATGTTATGGGCCTGAGTCTTCACTGAGGGAGTGTTGGAGAAGTTATGATCACCTTCCTGaactcacagtgatctgctcagATCTCCTGGTCCAGCCTGATATCTTCCTGACTGACTCAATGGGAGGGGTCTTCAGGGGCCACCAGGGGCCCGAGATGTTCAGGGGCTACAACTTCACCATCACCTGCTCCACTCAGCCACAGTACCCAGGAGGCTCCTTCCTCCTCACGTTCACCGGCTCCAACAGAACCCAGACCCAGccagctgtcaatcactctgctgccttcctcttccctgctgcagatgactcccaccaagggaactacagctgtgtttatgacaattatgttttctctcataacttctcctctgagagtgagctcctctcc

Function

NR:

description
PREDICTED: deleted in malignant brain tumors 1 protein-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036933977.1 True 2036 mRNA 0.52 7 74825186 74877445

Neighbor

gene id symbol gene type direction distance location
LOC110518241 LOC106592562 coding downstream 57023 74765988 ~ 74768163 (-)
LOC110497259 NA coding downstream 64538 74758689 ~ 74760648 (-)
LOC118936766 NA coding downstream 117462 74696063 ~ 74707724 (-)
LOC118936765 LOC106592562 coding downstream 148360 74674780 ~ 74676826 (-)
LOC118966653 NA coding downstream 711569 74112748 ~ 74113617 (-)
LOC118936768 NA coding upstream 17289 74894734 ~ 74910153 (-)
LOC110517287 LOC106601385 coding upstream 38911 74890707 ~ 74932952 (-)
LOC118966654 LOC106597013 coding upstream 56554 74933999 ~ 74970163 (-)
LOC110516473 LOC106591540 coding upstream 158285 75035730 ~ 75085676 (-)
LOC118936366 LOC106566139 coding upstream 176359 75053116 ~ 75056174 (-)
G925069 NA non-coding downstream 1886 74822993 ~ 74823300 (-)
G925010 NA non-coding downstream 16332 74807646 ~ 74808854 (-)
G925026 NA non-coding downstream 28333 74706338 ~ 74796853 (-)
G925027 NA non-coding downstream 28488 74706082 ~ 74796698 (-)
G925041 NA non-coding downstream 42464 74732750 ~ 74782722 (-)
G925104 NA non-coding upstream 62323 74939768 ~ 74961812 (-)
G925077 NA non-coding upstream 87706 74965151 ~ 74966051 (-)
G925110 NA non-coding upstream 102140 74979585 ~ 74986624 (-)
G925117 NA non-coding upstream 126547 75003992 ~ 75034849 (-)
G924041 NA other downstream 1193216 73630142 ~ 73631970 (-)
G923192 LOC106610383 other downstream 1899452 72905577 ~ 72928468 (-)
LOC110514144 LOC106602209 other downstream 3061266 71747636 ~ 71765505 (-)
LOC110534950 LOC106595337 other downstream 3077302 71744768 ~ 71752698 (-)
LOC118936746 LOC106602209 other downstream 3162052 71658344 ~ 71665901 (-)
G925211 NA other upstream 406546 75283991 ~ 75284673 (-)
LOC110511405 NA other upstream 614688 75491540 ~ 75494143 (-)

Expression


Co-expression Network