Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118936769 |
| gene name | NA |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048574.1 |
| NCBI id | CM023228.2 |
| chromosome length | 87811138 |
| location | 75290971 ~ 75302295 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005034233.1 | False | 479 | mRNA | 0.46 | 4 | 75290971 | 75302295 |
| TU1052014 | True | 395 | lncRNA | 0.35 | 2 | 75291147 | 75291965 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118966655 | LOC106609853 | coding | upstream | 23596 | 75263122 ~ 75267375 (+) |
| LOC110516094 | NA | coding | upstream | 50957 | 75233437 ~ 75240014 (+) |
| LOC110498618 | NA | coding | upstream | 518429 | 74771732 ~ 74772542 (+) |
| LOC118936935 | LOC106610453 | coding | upstream | 657691 | 74629489 ~ 74633280 (+) |
| LOC110534587 | LOC106610436 | coding | upstream | 890963 | 74372867 ~ 74400008 (+) |
| LOC110516474 | LOC106595897 | coding | downstream | 672 | 75302967 ~ 75306664 (+) |
| LOC110512116 | LOC106591540 | coding | downstream | 12085 | 75314380 ~ 75389957 (+) |
| LOC118936767 | NA | coding | downstream | 64076 | 75366371 ~ 75387497 (+) |
| LOC110511403 | LOC106610548 | coding | downstream | 121139 | 75423434 ~ 75481518 (+) |
| LOC110511404 | LOC106590758 | coding | downstream | 188002 | 75490297 ~ 75513196 (+) |
| G924832 | NA | non-coding | upstream | 6316 | 75284025 ~ 75284655 (+) |
| G924638 | NA | non-coding | upstream | 13402 | 75275686 ~ 75277569 (+) |
| G924794 | NA | non-coding | upstream | 43404 | 75204988 ~ 75247567 (+) |
| G924644 | NA | non-coding | upstream | 47490 | 75243007 ~ 75243481 (+) |
| G924641 | NA | non-coding | downstream | 30983 | 75333278 ~ 75353879 (+) |
| G924846 | NA | non-coding | downstream | 39272 | 75341567 ~ 75345170 (+) |
| G924849 | NA | non-coding | downstream | 48638 | 75350933 ~ 75351205 (+) |
| G924850 | NA | non-coding | downstream | 49183 | 75351478 ~ 75352081 (+) |
| G924859 | NA | non-coding | downstream | 88883 | 75391178 ~ 75391607 (+) |
| G924816 | LOC106601384 | other | upstream | 47970 | 75242472 ~ 75243001 (+) |
| G924787 | NA | other | upstream | 101740 | 75187255 ~ 75189231 (+) |
| G924772 | NA | other | upstream | 186001 | 75104617 ~ 75104970 (+) |
| G923659 | NA | other | upstream | 1610086 | 73483851 ~ 73680885 (+) |
| G923434 | NA | other | upstream | 2075513 | 73214487 ~ 73215458 (+) |
| G924916 | NA | other | downstream | 221063 | 75523358 ~ 75525800 (+) |
| G924927 | NA | other | downstream | 255165 | 75557460 ~ 75562892 (+) |
| LOC110531901 | LOC106610543 | other | downstream | 1567784 | 76869703 ~ 76884980 (+) |
| G926448 | LOC105024706 | other | downstream | 1991538 | 77293833 ~ 77296009 (+) |
