LOC110513699 (LOC100136663)


Basic Information

Item Value
gene id LOC110513699
gene name LOC100136663
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 77797140 ~ 77808789 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036934056.1
catacactcatacctctgtctctctcatacactcatacctctgtctctctcatacactcagacctctgtctcctcctcttccctccagcCAGTCTCTACAGATCTACTGTTTTTGACCAGAGGAGCAGAGCACCATGGTTGTGTCCAAGGCCTGGACGTTACGCCAGCACTTCCAGGGTTTCCCCAAGGCTAGTGACTTCCATCTGAGGGAGGAGACGCTGCCGCAGCCCAAGAATGGACAGGTGCTGTTGGAGGCTGTGTTCCTCAGTGTGGACCCTTACATGAGACCCTACAGCCAGACGATGATGAAGGAGGGAGACGTTATGATTGGATCACAAGTTGCCAAgGTGATCCAGAGCTATAACCTCAGCTTCCCGGTGGGCTGCCATGTGGTCAGTGATTGTGGATGGAGGAGTCACTGGGTGTGTGATGGGGCAGAGCTGACCCCTGTGCTTCCCGACTGGCCCCAggacatccccctctccctggccCTGGGGGCCATCGGCATGCCTGGTCTGACAGCTCTGTATGGACTAGAGGAGGTGTGTGAGATAAAGAAGGGGGAGACTCTTCTGGTGAACGCTGCAGCAGGAGCCGTGGGCTCAGTGGTGGGACAGATCGCCAAGATCAAGGGCTGCAGAGTGGTGGGCTGTGCGGGGACAGATAGCAAGGTGTCCTATCTAAAGGAGCTGGGTTTTGACCAGGTCTTCAACTACAAGACTGCCACCTCTCTGGAGGAATCACTCAGGGAGGCCGCGCCACACGGATACGACTGCTACTTTGAGAACgTTGGTGGGAAGTTCTCCAGTGTAGTGATGCCTCAGATGAGAGAGTATGGCAGAATAGCTGTGTGTGGAAGCATCTCCATGTACAACGACACCACACCACAGACAGGGCCGTATGTACACACCCATATGATCTTCAAGCAGCTGAGGATGGAGGGCTTCCTGTGTGCTCGCTGGAAACACAAACACCAGCAGTCACTGAGGAGGCTGATGGCCTGGATGActgagGGCAAGCTGAGATGCAATGAACACATCACCATTGGTTTCAACAACATGCCTGCTGCCTTCATGGGCatgctacagggagacaacacCGGCAAGGCTGTGGTCAAGGTGTGATGACATCACAATCAACATTACACTCCTCCAGAACATCTGGCTAAAGCATTCCAGAACACTCAACTTCATACACTCCAGGTTCTAGAACCAGAATCTGTTTCACCTTAACATTCCAGTATCCTTCCTGAAAATCACACTCTAGTGTTCTGTTCCATGTTTATTCATAGACACGTTCaacagacagctagacaggttTGGTCCAGTGTAATTCaacagacagctagacaggttTGGTCCAGTGTAATTCaacagacagctagacaggttTGGTCCAGTGTAATtcaacagacagccagacaggttTGGTCCAGTGTAATtcaacagacagccagacaggttTGGTCCAGTGTAATtcaacagacagccagacaggttTGGTCCAGTGTAATGCTATTAACTAAATAAACATGTCTTCACAATATAATGTTTATCATAAA
>XM_036934055.1
CACTTGGTTATGAACGTAGCATTAGGCTACAACTTCTGTCATCGCACTGTTCAATGATTCTGCTTTTTCGGTCGGTGAGGAAATATTAGGGTGAAAGTTTAGGCAACGTTATAACTCCAATGCCAGTAACAAAGCCCACAGTTCCCTTCCGGACACTGCGACAGATCGGTTTCTATACCCAATCCTGAGATCCACCGACAAGCCAACTTTCTCCAGCAGATTTGGGCGAGCCTGAACTGAAACAGGAGACGCGCAAGCACGGACCAAACGcCAGTCTCTACAGATCTACTGTTTTTGACCAGAGGAGCAGAGCACCATGGTTGTGTCCAAGGCCTGGACGTTACGCCAGCACTTCCAGGGTTTCCCCAAGGCTAGTGACTTCCATCTGAGGGAGGAGACGCTGCCGCAGCCCAAGAATGGACAGGTGCTGTTGGAGGCTGTGTTCCTCAGTGTGGACCCTTACATGAGACCCTACAGCCAGACGATGATGAAGGAGGGAGACGTTATGATTGGATCACAAGTTGCCAAgGTGATCCAGAGCTATAACCTCAGCTTCCCGGTGGGCTGCCATGTGGTCAGTGATTGTGGATGGAGGAGTCACTGGGTGTGTGATGGGGCAGAGCTGACCCCTGTGCTTCCCGACTGGCCCCAggacatccccctctccctggccCTGGGGGCCATCGGCATGCCTGGTCTGACAGCTCTGTATGGACTAGAGGAGGTGTGTGAGATAAAGAAGGGGGAGACTCTTCTGGTGAACGCTGCAGCAGGAGCCGTGGGCTCAGTGGTGGGACAGATCGCCAAGATCAAGGGCTGCAGAGTGGTGGGCTGTGCGGGGACAGATAGCAAGGTGTCCTATCTAAAGGAGCTGGGTTTTGACCAGGTCTTCAACTACAAGACTGCCACCTCTCTGGAGGAATCACTCAGGGAGGCCGCGCCACACGGATACGACTGCTACTTTGAGAACgTTGGTGGGAAGTTCTCCAGTGTAGTGATGCCTCAGATGAGAGAGTATGGCAGAATAGCTGTGTGTGGAAGCATCTCCATGTACAACGACACCACACCACAGACAGGGCCGTATGTACACACCCATATGATCTTCAAGCAGCTGAGGATGGAGGGCTTCCTGTGTGCTCGCTGGAAACACAAACACCAGCAGTCACTGAGGAGGCTGATGGCCTGGATGActgagGGCAAGCTGAGATGCAATGAACACATCACCATTGGTTTCAACAACATGCCTGCTGCCTTCATGGGCatgctacagggagacaacacCGGCAAGGCTGTGGTCAAGGTGTGATGACATCACAATCAACATTACACTCCTCCAGAACATCTGGCTAAAGCATTCCAGAACACTCAACTTCATACACTCCAGGTTCTAGAACCAGAATCTGTTTCACCTTAACATTCCAGTATCCTTCCTGAAAATCACACTCTAGTGTTCTGTTCCATGTTTATTCATAGACACGTTCaacagacagctagacaggttTGGTCCAGTGTAATTCaacagacagctagacaggttTGGTCCAGTGTAATTCaacagacagctagacaggttTGGTCCAGTGTAATtcaacagacagccagacaggttTGGTCCAGTGTAATtcaacagacagccagacaggttTGGTCCAGTGTAATtcaacagacagccagacaggttTGGTCCAGTGTAATGCTATTAACTAAATAAACATGTCTTCACAATATAATGTTTATCATAAA
>XM_036934057.1
TACAACCTTTCCACTTGGTTATGAACGTAGCATTAGGCTACAACTTCTGTCATCGCACTGTTCAATGATTCTGCTTTTTCGGTCGGTGAGGAAATATTAGGGTGAAAGTTTAGGCAACGTTATAACTCCAATGCCAGTAACAAAGCCCACAGTTCCCTTCCGGACACTGCGACAGATCGGTTTCTATACCCAATCCTGAGATCCACCGACAAGCCAACTTTCTCCAGCAGATTTGGGCGAGCCTGAACTGAAACAGGAGACGCGCAAGCACGGACCAAACGTCTCTACAGATCTACTGTTTTTGACCAGAGGAGCAGAGCACCATGGTTGTGTCCAAGGCCTGGACGTTACGCCAGCACTTCCAGGGTTTCCCCAAGGCTAGTGACTTCCATCTGAGGGAGGAGACGCTGCCGCAGCCCAAGAATGGACAGGTGCTGTTGGAGGCTGTGTTCCTCAGTGTGGACCCTTACATGAGACCCTACAGCCAGACGATGATGAAGGAGGGAGACGTTATGATTGGATCACAAGTTGCCAAgGTGATCCAGAGCTATAACCTCAGCTTCCCGGTGGGCTGCCATGTGGTCAGTGATTGTGGATGGAGGAGTCACTGGGTGTGTGATGGGGCAGAGCTGACCCCTGTGCTTCCCGACTGGCCCCAggacatccccctctccctggccCTGGGGGCCATCGGCATGCCTGGTCTGACAGCTCTGTATGGACTAGAGGAGGTGTGTGAGATAAAGAAGGGGGAGACTCTTCTGGTGAACGCTGCAGCAGGAGCCGTGGGCTCAGTGGTGGGACAGATCGCCAAGATCAAGGGCTGCAGAGTGGTGGGCTGTGCGGGGACAGATAGCAAGGTGTCCTATCTAAAGGAGCTGGGTTTTGACCAGGTCTTCAACTACAAGACTGCCACCTCTCTGGAGGAATCACTCAGGGAGGCCGCGCCACACGGATACGACTGCTACTTTGAGAACgTTGGTGGGAAGTTCTCCAGTGTAGTGATGCCTCAGATGAGAGAGTATGGCAGAATAGCTGTGTGTGGAAGCATCTCCATGTACAACGACACCACACCACAGACAGGGCCGTATGTACACACCCATATGATCTTCAAGCAGCTGAGGATGGAGGGCTTCCTGTGTGCTCGCTGGAAACACAAACACCAGCAGTCACTGAGGAGGCTGATGGCCTGGATGActgagGGCAAGCTGAGATGCAATGAACACATCACCATTGGTTTCAACAACATGCCTGCTGCCTTCATGGGCatgctacagggagacaacacCGGCAAGGCTGTGGTCAAGGTGTGATGACATCACAATCAACATTACACTCCTCCAGAACATCTGGCTAAAGCATTCCAGAACACTCAACTTCATACACTCCAGGTTCTAGAACCAGAATCTGTTTCACCTTAACATTCCAGTATCCTTCCTGAAAATCACACTCTAGTGTTCTGTTCCATGTTTATTCATAGACACGTTCaacagacagctagacaggttTGGTCCAGTGTAATTCaacagacagctagacaggttTGGTCCAGTGTAATTCaacagacagctagacaggttTGGTCCAGTGTAATtcaacagacagccagacaggttTGGTCCAGTGTAATtcaacagacagccagacaggttTGGTCCAGTGTAATtcaacagacagccagacaggttTGGTCCAGTGTAATGCTATTAACTAAATAAACATGTCTTCACAATATAATGTTTATCATAAA
>XM_036934058.1
ACTCGGATCATAATCGTATCAAGAGAATTGCTAATTTCCTTCACCATACTTGCTTGTTCAACTACTCGGCACACCTCTAGTAATAACCacctcccacttggttatgaatgcaGCATAAATTGACGGAGTAATGCTGCATTCATGGAAAGTGcCAGTCTCTACAGATCTACTGTTTTTGACCAGAGGAGCAGAGCACCATGGTTGTGTCCAAGGCCTGGACGTTACGCCAGCACTTCCAGGGTTTCCCCAAGGCTAGTGACTTCCATCTGAGGGAGGAGACGCTGCCGCAGCCCAAGAATGGACAGGTGCTGTTGGAGGCTGTGTTCCTCAGTGTGGACCCTTACATGAGACCCTACAGCCAGACGATGATGAAGGAGGGAGACGTTATGATTGGATCACAAGTTGCCAAgGTGATCCAGAGCTATAACCTCAGCTTCCCGGTGGGCTGCCATGTGGTCAGTGATTGTGGATGGAGGAGTCACTGGGTGTGTGATGGGGCAGAGCTGACCCCTGTGCTTCCCGACTGGCCCCAggacatccccctctccctggccCTGGGGGCCATCGGCATGCCTGGTCTGACAGCTCTGTATGGACTAGAGGAGGTGTGTGAGATAAAGAAGGGGGAGACTCTTCTGGTGAACGCTGCAGCAGGAGCCGTGGGCTCAGTGGTGGGACAGATCGCCAAGATCAAGGGCTGCAGAGTGGTGGGCTGTGCGGGGACAGATAGCAAGGTGTCCTATCTAAAGGAGCTGGGTTTTGACCAGGTCTTCAACTACAAGACTGCCACCTCTCTGGAGGAATCACTCAGGGAGGCCGCGCCACACGGATACGACTGCTACTTTGAGAACgTTGGTGGGAAGTTCTCCAGTGTAGTGATGCCTCAGATGAGAGAGTATGGCAGAATAGCTGTGTGTGGAAGCATCTCCATGTACAACGACACCACACCACAGACAGGGCCGTATGTACACACCCATATGATCTTCAAGCAGCTGAGGATGGAGGGCTTCCTGTGTGCTCGCTGGAAACACAAACACCAGCAGTCACTGAGGAGGCTGATGGCCTGGATGActgagGGCAAGCTGAGATGCAATGAACACATCACCATTGGTTTCAACAACATGCCTGCTGCCTTCATGGGCatgctacagggagacaacacCGGCAAGGCTGTGGTCAAGGTGTGATGACATCACAATCAACATTACACTCCTCCAGAACATCTGGCTAAAGCATTCCAGAACACTCAACTTCATACACTCCAGGTTCTAGAACCAGAATCTGTTTCACCTTAACATTCCAGTATCCTTCCTGAAAATCACACTCTAGTGTTCTGTTCCATGTTTATTCATAGACACGTTCaacagacagctagacaggttTGGTCCAGTGTAATTCaacagacagctagacaggttTGGTCCAGTGTAATTCaacagacagctagacaggttTGGTCCAGTGTAATtcaacagacagccagacaggttTGGTCCAGTGTAATtcaacagacagccagacaggttTGGTCCAGTGTAATtcaacagacagccagacaggttTGGTCCAGTGTAATGCTATTAACTAAATAAACATGTCTTCACAATATAATGTTTATCATAAA

Function

NR:

description
leukotriene b4 12-hydroxydehydrogenase/15-ketoreductase

GO: NA

KEGG:

id description
K13948 PTGR1, LTB4DH; prostaglandin reductase 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036934056.1 False 1561 mRNA 0.51 8 77797140 77805048
XM_036934055.1 False 1743 mRNA 0.51 9 77797140 77808272
XM_036934057.1 False 1750 mRNA 0.50 9 77797140 77808283
XM_036934058.1 True 1624 mRNA 0.50 9 77797140 77808789

Neighbor

gene id symbol gene type direction distance location
LOC110510380 LOC106597144 coding downstream 35179 77747757 ~ 77761961 (-)
LOC110518902 LOC106610539 coding downstream 101647 77637791 ~ 77719167 (-)
LOC118936772 LOC105024706 coding downstream 479336 77293441 ~ 77317804 (-)
LOC110515566 LOC100700017 coding downstream 549656 77208509 ~ 77247484 (-)
LOC118936771 LOC106592107 coding downstream 621669 77149546 ~ 77175471 (-)
LOC110512764 LOC106577271 coding upstream 30578 77839367 ~ 77842656 (-)
LOC110511737 LOC106602153 coding upstream 77040 77885342 ~ 77889538 (-)
LOC110516884 LOC105020884 coding upstream 105180 77913969 ~ 77919654 (-)
LOC110497206 unc93b1 coding upstream 142570 77951359 ~ 77961077 (-)
timm10 timm10 coding upstream 152679 77961468 ~ 77963679 (-)
G926734 NA non-coding downstream 10240 77786645 ~ 77786900 (-)
G926690 NA non-coding downstream 58379 77635900 ~ 77738761 (-)
G926688 NA non-coding downstream 66261 77630808 ~ 77730879 (-)
G926711 LOC106591138 non-coding downstream 71741 77722228 ~ 77725399 (-)
G926752 NA non-coding upstream 8318 77817107 ~ 77818284 (-)
G926757 NA non-coding upstream 15444 77824233 ~ 77825618 (-)
G926758 NA non-coding upstream 18890 77827679 ~ 77827957 (-)
G926760 NA non-coding upstream 26511 77835300 ~ 77835541 (-)
G926761 NA non-coding upstream 26904 77835693 ~ 77835909 (-)
G926732 NA other downstream 13835 77782012 ~ 77783305 (-)
G926001 NA other downstream 1399192 76396348 ~ 76399221 (-)
LOC110511405 NA other downstream 2303029 75491540 ~ 75494143 (-)
G925211 NA other downstream 2512467 75283991 ~ 75284673 (-)
LOC118936366 LOC106566139 other downstream 2742759 75053116 ~ 75056174 (-)
G927157 timm10 other upstream 153748 77961348 ~ 77963652 (-)
G927317 LOC106610497 other upstream 573480 78382269 ~ 78434096 (-)
G927222 LOC106610501 other upstream 632516 78441305 ~ 78441982 (-)
LOC110497241 LOC106610501 other upstream 634139 78440760 ~ 78445626 (-)
LOC110497224 LOC106610522 other upstream 658643 78464404 ~ 78474168 (-)

Expression


Co-expression Network