LOC110497207 (LOC106610467)


Basic Information

Item Value
gene id LOC110497207
gene name LOC106610467
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 77963529 ~ 77966862 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021573205.2
GAAAGGAGAAAGTAGGAGAACCTCAtggaaaggagaaaggaggaggagaaccacagggaaaggagaaaggaggaggagaaccacagGTAAAGGAAAAAGGAGGAGACCCACAGGTAAAGGAGAACGGAGGAGGGGAACCACAGGGAAAGGACGACAAGCGAAAGAAGTGCAGGAAAAGGGTGAGGCTCAGGGAGGGACACGgcaaaggagagagagcagagttgtTCCAGAGACTACCTGTGCTGTCTAAATCTAAAACAGTTGCTCAAAAGCCTAGCTCGCTGACAACTTCCCCCAGTACCCATGAAGAGCAAGTTCCTTCCAACTGTTCAGGGATTGGAACCGGAACCATTCTGCAACCCCCGCCGTCGGGTCATCCACAGAACTCCAGTCCAAAAAGATCTGGAGAGACCGAATCAGACAGAGACCCATTGAGACCCCCTGCTGTCAAGCGGACCCCCTCCAAGGGTCGGGCACCCACTGTGTGTCTCAAGAAGTTCCAAGAACTCCTGAAGCACAGGCACCAAAAGACGAGGAAGTCCACCAAAAGCAAGGAGACAAAAGAAAGTGAAACTGAAGTTCAGAAACAAAGTGAAAGAAAATTATTGAAACCCAACGAAAGTGACAACGGTCAAAATGAATCAAGACTGATGAACAAAAACACAAGTTCCTCCCAGTCTCTAGAAAGAGAGTCGGCCATTAGACCAACCGTTGATAATGACGATCAGACCAACCGAACAGAGAGCGACCATCCAGAGGAAAAAGATGGAGGACACGACAGCAGCACTTGTGGACAGGAGACGGAGTATcaagatctcatctacaaagaGACTGAAAGAGAAAACGTTGAGGATGGAGAACATTTTGAGAACAGAGAAAACGTTTTAGACGGGGAAAACGTGGATGCGTCAGGAGACTTTTTCAAACTCCGAGAGGAGCTGGCTACCTTGTCAGTTTTATCGATGACAAGGACAAAGGAAATGGTGGATCCTCATCGGAGCGACAAAGGCAACAAGGATGGAAGATATCTGGTTTccaaggagaacagagagagggaaacagactcGTCTACAGAGACAAACAAGAAGACCGAAAAGGGAAAAGGATCCGTGGTGGAGGCGTATAGGAGAAGTTTGATCATCCAAGAGGTGGAGGAGAAAATGGAGGATGGGTATTTGGAGATGGAGATCTCCAGCGAGGAGTTGGATGTGGTTGATGAGGTCCAGCAGACGTTGGGCTACGCCGGGGCTGAGGAAGTGagtggggaagaggaggagatagatGTAGAGGAGATGGGTCCAACGATGTATCCTGATGCAGCTTGGCAAGAGGTTCCCGGCGCCAGAGAAGTGGACCAAGCGAGTTCCACCATGGCCAGCTTCAGAGGCATCACCCACAACCAAATCCACCTCCCTCAGAAAATCAAAATGGCGACCGCTGCCCCCGAGATGGCCGACGTGAGTATTCCGACCCCTCTGGAGGCAGAGCCTTTCACGCTGACATCACGAAGGGTCACCACGGGGTCAACAGGAAGCTGGGagccagaggaggaagaggacgtgGAGGTGGACGTTCTTGAGTGGTCGCCGGATGTGCGACCAAGAGTGTGGGGAGTGGGACTTGAGCAAGGCGTCACAGAACTGACCGAGGAAGAAGAGATAGACGTGATGGGAGAGGAAACGGACTGACGGAAGTGGTTCTTGAGAGGGAAGGAACAACACACGTGTATTCCTCAATCTGAAGGTTAAATAAGCCGGTGGTCGGGTGTGTTTGTTGGCCGCTGAGAGTGGTCGTTTGGACGGTTCGATTTTGGAGAGAGTACGG

Function

NR:

description
uncharacterized protein LOC110497208

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021573205.2 True 1824 mRNA 0.51 3 77963529 77966862

Neighbor

gene id symbol gene type direction distance location
LOC110497206 unc93b1 coding downstream 2452 77951359 ~ 77961077 (-)
LOC110516884 LOC105020884 coding downstream 43875 77913969 ~ 77919654 (-)
LOC110511737 LOC106602153 coding downstream 73991 77885342 ~ 77889538 (-)
LOC110512764 LOC106577271 coding downstream 120873 77839367 ~ 77842656 (-)
LOC110513699 LOC100136663 coding downstream 154740 77797140 ~ 77808789 (-)
LOC110519243 LOC106610489 coding upstream 10747 77977609 ~ 78032604 (-)
LOC110498610 LOC106610491 coding upstream 105924 78072786 ~ 78082916 (-)
LOC110498425 LOC106610496 coding upstream 327726 78294588 ~ 78300233 (-)
LOC118936782 LOC106610527 coding upstream 372161 78339023 ~ 78354474 (-)
LOC110497241 LOC106610501 coding upstream 473898 78440760 ~ 78445626 (-)
G927183 NA non-coding downstream 28433 77930410 ~ 77935096 (-)
G927173 NA non-coding downstream 68601 77894677 ~ 77894928 (-)
G927153 NA non-coding downstream 70153 77891140 ~ 77893376 (-)
G927149 NA non-coding downstream 78293 77883142 ~ 77885236 (-)
G927192 NA non-coding upstream 39091 78005953 ~ 78006293 (-)
G927203 NA non-coding upstream 67893 78034755 ~ 78035026 (-)
G927207 NA non-coding upstream 73104 78039966 ~ 78040190 (-)
G927165 NA non-coding upstream 73528 78040390 ~ 78042054 (-)
G926732 NA other downstream 180224 77782012 ~ 77783305 (-)
G926001 NA other downstream 1565581 76396348 ~ 76399221 (-)
LOC110511405 NA other downstream 2469418 75491540 ~ 75494143 (-)
G925211 NA other downstream 2678856 75283991 ~ 75284673 (-)
LOC118936366 LOC106566139 other downstream 2909148 75053116 ~ 75056174 (-)
G927317 LOC106610497 other upstream 415407 78382269 ~ 78434096 (-)
G927222 LOC106610501 other upstream 474443 78441305 ~ 78441982 (-)
LOC110497224 LOC106610522 other upstream 500570 78464404 ~ 78474168 (-)
LOC110497238 LOC106610518 other upstream 540215 78505862 ~ 78510097 (-)

Expression


Co-expression Network