LOC118966656 (LOC106610525)


Basic Information

Item Value
gene id LOC118966656
gene name LOC106610525
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 78389023 ~ 78432765 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036989398.1
CGGTACAGTccagtatatatacaggtgtACTGTATCTTCCAGAGTGTTCCTCTACACTTTGGGTTACTGCTGCaacagagacagggaaagaggaagagatcCAACTACGCTCAAATAACCTGAGAAGCCACCCCCCACTCCCTAAAGACTGATGATGTCACCGGTGCTGGGTGTGTCCTTCCTGGCTCTGGTCCTATCAGGAGGAGCCTGGGCGTTTGCTCCCATTGGGGGTGGAGCCTCCACCCACGTCAGCATCACGGGAACGGCCGTGCTACAGAAGGTCACAGAGGTGTGCCGAGCCATCGCCGAGACAGAGGGACGAGACTTCACCCCCacgGGTAACTCTGCTGAGGAGCTGGTCCAGGCCTGCCTGGGACCCAAAGCAACAGGTGAAGTGTCAGCAGCTAAGTTCAAATCTGCCCTGAATGAGATCTACATACAGAACGGACAGGTGGACAGAGACTTTGTCAACAGCCCAGCCCATCACTTCAACTCAGAGGCGTTTGCTCTGGGCCGGCGCCTTATAACTGATGGGGTGGCCAGCATCAAGGCCAACGTACAAAGGGAGAACTTCCAGGCTGccagagagacactggggagagtactgcacacactacagGATTTCTACAGCCACAGTAACTGGGTGGACCTGGGATACACTGAACCCTACGCCAACCTGATCCGCCCCGATCTCCCACTGGAAAACCTGGCAGATGTCAGCACCCCGACCTGCAGTGACTGTGTCAGTGGGGGGTTCTGTTCCAACTCCATCCTTCCTAACATCCTTAATGAGAAGAAACTCACCTCTGGGTACATGGGGATCTTCTCCGCAGCTAAGCCTgaaggtaAGTGTAGTCATGGCGGTGCAGCTGACCTAACCAGCTCTGAGGTTCCTCGCGGGGGCATCAGCAAGGATGAGCGTCGCTCTGACAACGTGGCCCTGCACACTGCTGCTGTCACCGTGGCAACGACCGCAACCCTCCGGCTGCTGGACGACATCCGGGGAGCCGCCGGTGACAACAACTACCTACGcttcATGGGCATTGCGCGATCGGCAGTGGTTGCTTTTGTGATCGACACCACGGGGAGCATGAAGGATGACATCCTTGAAGCCAAGAGAGTCGTCAATGAGATCATCGACAGCAAGAAGGGAACGCAGGATGAGCCCTCCCAGTACATCCTGGTCCCATTCAACGACCCAAagttcgGACCCCTGATAAGAACGACAAACCCTGATGTTATGAAAACAGAGATCGCTAAACTCAAAGCTGATGGAGGCGGAGACCTCCCTGAGATGTGCTTATCAGGcctacagttggcGCTGACCGGTGCCCCTGCGTCCTCCCACATCTATGTTTTCACAGATGCCGTTGCCAAGGACATTGCGTTAAGGGACACAATCTTGGCCCTGATCAGGAGCACCAAGTCAACTGTGTCTTTCTTCATGactggtgctggtgctggtgctAGAAGGAGGAGAAGTGGAGTAGAGTCCAGGGCAGCTACATTCGAGACCTACAAGGACTTGGCGCTGGCGTCTGGTGGTCAGGCCATTGGAGTCACCAAGGAAAATCTGCCCCAGGCCACTGACGTCATCATCGACTCCTCCACCTCCGCTCTGgtgACAGTCCTACAGCGAGCGAGGAACCCAGGCAAAGCTGAGACATTCTCCTTCCTGCTGGACGAGTCTCTGAACAACATCACCATCTACATCACTGGAAAGTCCCTCACCTTCACCCTGAAGAACCCTGCAGGTGTGACCCAGAAACAGAATGAGGTCAACGGGGAACTGGGGACTGTCCAGACGGTGGGCAACCTCTTCCGGGTCCGTCTGGCCTCCAACAAACAGACAGGATTATGGGAAATCAGCATGAACTCCAACCAGCCCTACACACTGAAGGTCACTGgtcagAGTACCATTGCCTTCATTTATGACTTTGTGGAGACCTTCGATGGACCTCATCCAGGATATGCCCTCATCTCTGGCCGTCCACAAGCAGgtATGCCTGCCATGCTGTTGGTATCAGTGTTGGGCAGAAAGGGCCCAGCCTCTGTCAAGGTGGCCAACGTTGCCTTGGTGACAGTGTCAGGGTCAGAGGTCGTAAGTGGGGCCCTGGAAGACATGGGCAACGGGGAGATCCTAGTTACGGTAACCAATGTCCCTGCGGGGGAGTTTGTGGTGCTGCTGAACGGGACAGATGTGGTCTCCTCCACCGTGTTCCAGAGACAGTCCACCACTCAGATGTCCGTCTCCAAGGTTACCATCAAGGCCGTGGTGGACAGAAGCATGGAGCCTGGTAAAACCTTCACCCTTCCCTTCACCGTCATGACCGACGCCACTGGAGGCAGCTACACAATCAGTGCCAGAAACGACCGAGACTTCAAAATGAACGTCCCTGGCAGCATCGATGTGACCACCGGAGGAAACGCCACCGGTGAACTGACCATCACGGTGCCCGCCAACACCCCCTCAGGAACAGACGTCACCCTGACCATCGAGGCTGTGGCCCCCGGGGCGTCCGACTCCAACTACGCCGTCCTGCGCCTCTCTGTCGTCACCAAGGTGACAGATTTCACCCCTCCCCAGTGTGAGGTAGTCAGCGTCTCATCGGTCGACTGCCCAGCTGACCCAGCAGCCTGCAGCTCCGCCTTCTGGCAGCTCTCTGCCAACATGACCGACGGTGTCAATGGCACAGGGATCGCCAGCCTCACACACCGCCAGGGAGTGGGCAGCCTCACCCACACGGACCTAAAGCAGATGGTTGTTGCAGCAGCGTTCAACGCTTCGTGCTGCTCTCTGACAGTGGAGCTGGTGGCGTTGGACAAAGCCATGAATGTCGGCACCTGTCTATACACCACCAAGGTGACAGATGTCACCCCTCCCCAGTGTGAGGTGGTCAGTGTCTCATCGGTCGACTGCCCAGCTGACCCAGCAGCCTGCAACTCTGCCTTCTGGCAGCTCTCTGCCAACCTGACAGACGGCGTCAATGGCACAGGCATCGCCAGCCTCACACACCTCCAGGGCGTAGGCAGCCTCACCCACACGGACCTAAAGCAGATGGTTGTTGCAGCAGCGTTCAACGCTTCGTGCTGCTCTCTGACAGTGGAGCTGGTGGCGGTGGACAAAGCCATGAATGTCGGCACCTGTCTATACACCACCAAGGTGACAGATTTCACCCCTCCCCAGTGTGAGGTGGTCAGCGTCTCGGTGGTCGACTGCCCAGCTGACCCAGCAGCCTGCAGCTCCGCCTTCTGGCAGCTCTCTGCCAACCTGACAGACGGCGTCAATGGCACAGGCATCGCCAGCCTCACACACCTCCAGGGCGTAGGCAGCCTCACCCACACGGACCTGAAGCAGACGGTTGTTGCAGCAGCGTTCAACGCTTCGTGCTGCTCTCTGACAGTAGAGCTGGAGGCGGTGGACAAAGCCATGAATGTCGGCACCTGTCGGTTTTCCATCGTCCGCAACGCGGGACCGCCCTCCATGGCTCTGTCCCTCCCACTGTTGGTGTGTCTGCTGGTCTCTGCCTTCTTCACTACGTCCCTCAGAGACCTACTTATCTGA

Function

NR:

description
von Willebrand factor A domain-containing protein 7-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036989398.1 True 3565 mRNA 0.57 20 78389023 78432765

Neighbor

gene id symbol gene type direction distance location
LOC118936781 LOC106610525 coding upstream 4951 78355761 ~ 78384072 (+)
LOC118936780 LOC106610496 coding upstream 71419 78294588 ~ 78331698 (+)
LOC110497212 LOC106610528 coding upstream 99190 78265470 ~ 78289833 (+)
LOC110518385 LOC106597144 coding upstream 142685 78215387 ~ 78247524 (+)
LOC118936774 LOC106610528 coding upstream 213861 78147469 ~ 78175162 (+)
LOC118936487 LOC106602251 coding downstream 12980 78445745 ~ 78452257 (+)
LOC110497230 LOC106610523 coding downstream 21245 78454010 ~ 78463872 (+)
LOC110497234 LOC106610520 coding downstream 43198 78475963 ~ 78482853 (+)
LOC110497227 LOC106610465 coding downstream 62586 78495351 ~ 78501627 (+)
LOC110497229 LOC106602251 coding downstream 86885 78519650 ~ 78533161 (+)
G926922 NA non-coding upstream 53016 78335763 ~ 78336007 (+)
G926903 NA non-coding upstream 90733 78295820 ~ 78298290 (+)
G926871 NA non-coding upstream 179792 78208432 ~ 78209231 (+)
G926910 NA non-coding downstream 2891 78435656 ~ 78436322 (+)
G926948 NA non-coding downstream 4178 78436943 ~ 78437210 (+)
G926949 NA non-coding downstream 4509 78437274 ~ 78439114 (+)
G926950 NA non-coding downstream 100669 78533434 ~ 78533944 (+)
LOC110510687 LOC106591138 other upstream 663970 77722229 ~ 77734491 (+)
LOC110534594 LOC106577279 other upstream 935108 77360360 ~ 77632808 (+)
G926448 LOC105024706 other upstream 1093014 77293833 ~ 77296009 (+)
LOC110531901 LOC106610543 other upstream 1504781 76869703 ~ 76884980 (+)
G924927 NA other upstream 2829424 75557460 ~ 75562892 (+)
G927061 LOC106602167 other downstream 343170 78775935 ~ 78787563 (+)
LOC110515636 LOC105020871 other downstream 619726 79023569 ~ 79065796 (+)
G927584 NA other downstream 767516 79200281 ~ 79202981 (+)
G927606 NA other downstream 848621 79281386 ~ 79284144 (+)

Expression


Co-expression Network