LOC110498612 (LOC106610501)


Basic Information

Item Value
gene id LOC110498612
gene name LOC106610501
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 78441659 ~ 78442168 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021575262.2
ATGGGGAAGCGCCCGTTCGTCTGCTCAGCCTGCGGCAAGGACTTCCCCAACCTCAAGGGCCTCAACCGCCATGACCGCGTCCATGGCGACCAGTGTCCGCAGTGCAGCAAGACCTTTGTCTACCGCTTCGGCCTGACTAAGCACGAGCAGATGGTCCACAGCGGCGTGCGCCCGTTCATCTGCCCGATCTCTGGCAAACGCTTCGCCATTCGGCGCGACATGGAGACGCATCTCTGtgttcacactggagagaaaccatttGCCTGCTCCCTCTGTGTGAAGCGGTTCAAGAGGCGTGTGGAGCTGAATGTTCACCTGAGGTGGCACAACGGGGAGAAGAGACACTGGTGCTCGTACTGCGGGAAGGGCTTTCTGGATTACAATAATCTGAAGAGGCACAAACTGGTCCACACTGGGGAGAAACCTCACACCTGCTCTGAGTGTGGCAAGCACTTCAAACAGACTGGCCATCTGAAGAAACACCTGAAGACAATACACAAAGACAGATAG

Function

NR:

description
PREDICTED: uncharacterized protein LOC106610501 isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021575262.2 True 510 mRNA 0.56 1 78441659 78442168

Neighbor

gene id symbol gene type direction distance location
LOC118936782 LOC106610527 coding downstream 87185 78339023 ~ 78354474 (-)
LOC110498425 LOC106610496 coding downstream 141426 78294588 ~ 78300233 (-)
LOC110498610 LOC106610491 coding downstream 358743 78072786 ~ 78082916 (-)
LOC110519243 LOC106610489 coding downstream 409055 77977609 ~ 78032604 (-)
LOC110497207 LOC106610467 coding downstream 474797 77963529 ~ 77966862 (-)
LOC110497224 LOC106610522 coding upstream 22236 78464404 ~ 78474168 (-)
LOC110497238 LOC106610518 coding upstream 63694 78505862 ~ 78510097 (-)
LOC110497231 LOC106610547 coding upstream 73131 78515299 ~ 78519538 (-)
LOC110497253 NA coding upstream 96907 78539075 ~ 78543869 (-)
LOC100136185 LOC100136185 coding upstream 104569 78546737 ~ 78569365 (-)
G927216 NA non-coding downstream 3036 78437347 ~ 78438623 (-)
G927336 NA non-coding downstream 4975 78436473 ~ 78436684 (-)
G927335 NA non-coding downstream 5200 78435681 ~ 78436459 (-)
G927290 NA non-coding downstream 116051 78325085 ~ 78325608 (-)
LOC110497241 LOC106610501 non-coding upstream 117 78440760 ~ 78445626 (-)
G927343 NA non-coding upstream 91421 78533589 ~ 78533947 (-)
G927349 NA non-coding upstream 92484 78534652 ~ 78534851 (-)
G927371 NA non-coding upstream 95445 78537613 ~ 78538311 (-)
G927317 LOC106610497 other downstream 7563 78382269 ~ 78434096 (-)
G927157 timm10 other downstream 478007 77961348 ~ 77963652 (-)
G926732 NA other downstream 658354 77782012 ~ 77783305 (-)
G926001 NA other downstream 2043711 76396348 ~ 76399221 (-)
LOC110511405 NA other downstream 2947548 75491540 ~ 75494143 (-)
G927654 LOC106591987 other upstream 776347 79218515 ~ 79222867 (-)
LOC110511089 LOC106591771 other upstream 789003 79222288 ~ 79237169 (-)

Expression


Co-expression Network