LOC118936785


Basic Information

Item Value
gene id LOC118936785
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 78755860 ~ 78756740 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005034238.1
acagagagagagagagagagagagagagagagagagagaatagtggtGGAGATATTGTATTAGCAATGTTGTTTTCTGTCACAATAACAGACGTTCATCAATGGGCTTAAATCAGTCAGTCATgtctggattggtctgactgactctgttactgaGGGGACCTGGAAATGGGTGAACGGAAccccactgaccaccccaagGTATTGGAGGAGTGGAGAGCCTAATGGTGGTGGCGTGGAGAACTGTGTGGTGGTACCTTACTGGTCATCAGGCCAAGGAGATTGGTGGGACTATCAGTGTTCTAATCGAGAGTACTGGATCTGTGAAAAAGGCCTGTTGTAGGTACTGCTGTTTAAAGAACTCTGAAGACTGATTATAGATTTTGGGAAAATGGCACTATGAACAAGacgttggagagagagaggcacgtacacacacacacacacacacacacacacacacacacacacacacacacggaagcaTTCACACACAGAAAACAAATTAGGTatttacactaccagtcaaacttttggacacacctaatcattccaggttttttttttattctacattgtagattaatag

Function

NR:

description
C-type lectin domain family 4 member M-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005034238.1 True 588 mRNA 0.44 2 78755860 78756740

Neighbor

gene id symbol gene type direction distance location
LOC110497244 LOC106610431 coding downstream 4942 78696404 ~ 78750918 (-)
LOC118936784 NA coding downstream 146517 78604045 ~ 78609343 (-)
LOC110497254 LOC106602245 coding downstream 156847 78593433 ~ 78599013 (-)
LOC100136185 LOC100136185 coding downstream 186495 78546737 ~ 78569365 (-)
LOC110497253 NA coding downstream 211991 78539075 ~ 78543869 (-)
LOC118936786 LOC106610904 coding upstream 47022 78803762 ~ 78804351 (-)
LOC110498601 smc2 coding upstream 59737 78816477 ~ 78862674 (-)
LOC118936787 NA coding upstream 60559 78817299 ~ 78817965 (-)
LOC118936936 NA coding upstream 108143 78864883 ~ 78866921 (-)
LOC110516210 LOC106591942 coding upstream 191706 78942892 ~ 79011434 (-)
G927433 NA non-coding downstream 41637 78713650 ~ 78714223 (-)
G927373 NA non-coding downstream 43085 78701290 ~ 78712775 (-)
G927408 NA non-coding downstream 72886 78615479 ~ 78682974 (-)
G927407 NA non-coding downstream 142231 78612505 ~ 78613629 (-)
G927406 NA non-coding downstream 148777 78606679 ~ 78607083 (-)
G927464 NA non-coding upstream 58752 78815492 ~ 78860585 (-)
G927488 NA non-coding upstream 124512 78881252 ~ 78881724 (-)
G927478 NA non-coding upstream 135202 78891942 ~ 78939199 (-)
G927477 NA non-coding upstream 182885 78939625 ~ 78941438 (-)
LOC110497238 LOC106610518 other downstream 245929 78505862 ~ 78510097 (-)
LOC110497224 LOC106610522 other downstream 281801 78464404 ~ 78474168 (-)
LOC110497241 LOC106610501 other downstream 310719 78440760 ~ 78445626 (-)
G927222 LOC106610501 other downstream 313878 78441305 ~ 78441982 (-)
G927317 LOC106610497 other downstream 321764 78382269 ~ 78434096 (-)
G927654 LOC106591987 other upstream 461775 79218515 ~ 79222867 (-)
LOC110511089 LOC106591771 other upstream 474431 79222288 ~ 79237169 (-)
G927673 NA other upstream 517953 79274693 ~ 79281790 (-)
G927893 NA other upstream 615376 79372116 ~ 79372872 (-)
G927948 LOC106602109 other upstream 799230 79554714 ~ 79559828 (-)

Expression


Co-expression Network