LOC110534589 (LOC106610450)



Basic Information


Item Value
gene id LOC110534589
gene name LOC106610450
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 78775880 ~ 78777576 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>XM_021619501.2
TATGTGCCTGTATTCAGCCAGAGAGGAGGGACTgtgaaaataaacaaaaaaccACTGGTATAACAAGGCTCTCTAAAAGTTGAACATTTGAATGCTGATTCTGTATCTGAAAAGATAATTCATCTCCATTGCAAGTTGAAATTGGACCAATATATTTTGACATCATGGCAAGACACAAGATCCTCACCTTTACTGTGATGTATTTCTTCCAGGCTTGGACTTTGGGTGTGGACTCCAAGATGGTTCAtctccatcagcctggtctcaaTTCCAGCATACCCTTAGACATGGTCCCTGACTCTGTTGACGACATGTATAATGGCTGCACTGAACAAATGTACAACAAGGTGCAGAAGGAATATCTTCCAAATGAAATTAACAAAGTAGGGATCTTCAAACAAGCCTGGATGAAGGCAGAAGGATGTGCAACTATTGAGAATGTGAAGAAACGATTCCAAAAGGACAAGTCCAAGTACAATCCTAAAGAACTTCCACATGATCATATCAAGGCTATCTGTGCTTACTCAGGGGGTCAAAGTAAGATGTACCCAGTGTTCAACCAAGCAGTCCGGACCAGTAGAACAGAGTACACCACCTCCTTCCAGTTCCACTCCCTTCACTTCCTGCTGACTGACGCCATTCGCCTCCTGAAACTGAACCAAAAGTCCTGTCACACCACGTATCGAAGAACCAACATGGAGTTTGTTAGTAAAGTTAACAAAGAAATCAGATTTGGCTTCTTTGCCTCCAGCTCTCTCGACAAGGGTATTAGTACAAGATTTGGAGACAAGTCTTGCTTTGAGATAGAGACATGTTTTGGCGCTGACCTGAAGTCCTACCCCAAACTGGGGAATTATGAAAAGGAGGTGTTGATTCCACCATATGAAGTGTTCAAAGTTACTGCTGTGCTGAAGAAAGAAAATGATAAAAACCTTTGGTGCGATGTTGTGTACACAGTTAAAAGTATCACCAAGCCAAGGAGTAACCTGAATTGCAAACTTTTTAAGTAAACAATTATTAATAACTAAGAAAATTTCTTATATACCTTCTGCAGCTTGTGGCAAAATGAATAAAGAAAATCATTGAGCTTGACAGCAGTATGTCTAGTCCTTTTAGTTATCACTTTCACTGTACTACATTTAGACTGTCTGAAGATACAACATTACATGGGCCACTGATTAAGATGTAATATAACATGACACGAGTTGAATTGTCCAATAAAGTGAATCTGGAAA

Function


NR:

description
NAD(P)(+)--arginine ADP-ribosyltransferase 2-like

GO:

id name namespace
GO:0006471 protein ADP-ribosylation biological_process
GO:0003956 NAD(P)+-protein-arginine ADP-ribosyltransferase activity molecular_function

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
XM_021619501.2 True 1235 mRNA 0.40 2 78775880 78777576

Neighbor


gene id symbol gene type direction distance location
LOC110497250 LOC106602246 coding upstream 45720 78726999 ~ 78730160 (+)
LOC110534505 NA coding upstream 48878 78724058 ~ 78727002 (+)
LOC118966657 LOC106602244 coding upstream 132387 78634160 ~ 78643493 (+)
LOC110497242 LOC106610480 coding upstream 237571 78535124 ~ 78538309 (+)
LOC110497229 LOC106602251 coding upstream 242719 78519650 ~ 78533161 (+)
LOC118966658 NA coding downstream 9182 78786758 ~ 78787742 (+)
LOC110534603 LOC106602125 coding downstream 28218 78805794 ~ 78816438 (+)
LOC118936788 LOC106591635 coding downstream 97210 78874786 ~ 78881196 (+)
LOC110513597 LOC107093492 coding downstream 107696 78885272 ~ 78937306 (+)
LOC110516209 NA coding downstream 161862 78939438 ~ 78942355 (+)
G927013 NA non-coding upstream 97103 78618160 ~ 78678777 (+)
G927006 NA non-coding upstream 168384 78606339 ~ 78607496 (+)
G926999 NA non-coding upstream 182912 78592120 ~ 78592968 (+)
G926994 NA non-coding upstream 188782 78586681 ~ 78587098 (+)
G926988 NA non-coding upstream 199479 78573496 ~ 78576401 (+)
G927077 NA non-coding downstream 56580 78834156 ~ 78834407 (+)
G927080 LOC106610560 non-coding downstream 71328 78848904 ~ 78854165 (+)
G927098 NA non-coding downstream 130546 78908122 ~ 78908521 (+)
G927105 NA non-coding downstream 151570 78929146 ~ 78930875 (+)
LOC110510687 LOC106591138 other upstream 1050827 77722229 ~ 77734491 (+)
LOC110534594 LOC106577279 other upstream 1321965 77360360 ~ 77632808 (+)
G926448 LOC105024706 other upstream 1479871 77293833 ~ 77296009 (+)
LOC110531901 LOC106610543 other upstream 1891638 76869703 ~ 76884980 (+)
LOC110515636 LOC105020871 other downstream 274915 79023569 ~ 79065796 (+)
G927584 NA other downstream 422705 79200281 ~ 79202981 (+)
G927606 NA other downstream 503810 79281386 ~ 79284144 (+)
LOC110514189 LOC106593948 other downstream 820069 79597075 ~ 79601686 (+)
LOC110532970 LOC105020822 other downstream 949469 79727045 ~ 79782057 (+)

Expression



Co-expression Network