LOC118937100


Basic Information

Item Value
gene id LOC118937100
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048574.1
NCBI id CM023228.2
chromosome length 87811138
location 79264104 ~ 79264267 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005034494.1
atacttacctggcaagggagacaccgtgatcacgaaggcggttcacccagggcgaggctcagccattgcactccggctgtgctgacccctgcgaatttctcaaatgtggaaatctcgattgcataatttctggtagtgggggactgcgttcgcgctctcccctg

Function

NR:

description
PREDICTED: calcium-binding protein 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005034494.1 True 164 mRNA 0.56 1 79264104 79264267

Neighbor

gene id symbol gene type direction distance location
LOC118937099 NA coding upstream 1923 79262018 ~ 79262181 (+)
LOC118937098 NA coding upstream 4009 79259932 ~ 79260095 (+)
LOC118937097 NA coding upstream 6095 79257846 ~ 79258009 (+)
LOC118937096 NA coding upstream 8181 79255760 ~ 79255923 (+)
LOC118937095 NA coding upstream 10267 79253674 ~ 79253837 (+)
LOC118937102 NA coding downstream 2492 79266759 ~ 79266922 (+)
LOC118937103 NA coding downstream 5147 79269414 ~ 79269577 (+)
LOC118937104 NA coding downstream 7802 79272069 ~ 79272232 (+)
LOC118937105 NA coding downstream 9888 79274155 ~ 79274318 (+)
LOC118936978 NA coding downstream 11738 79276005 ~ 79292617 (+)
G927579 NA non-coding upstream 69844 79193026 ~ 79194260 (+)
G927572 NA non-coding upstream 90241 79173530 ~ 79173863 (+)
LOC110513571 LOC106602128 non-coding upstream 93059 79167704 ~ 79171045 (+)
G927571 NA non-coding upstream 97941 79165565 ~ 79166163 (+)
LOC110513572 LOC106596357 non-coding upstream 103184 79159507 ~ 79164674 (+)
G927607 NA non-coding downstream 13757 79278024 ~ 79325667 (+)
G927612 NA non-coding downstream 25442 79289709 ~ 79290213 (+)
G927624 NA non-coding downstream 59374 79323641 ~ 79323982 (+)
G927626 NA non-coding downstream 65563 79329830 ~ 79330294 (+)
G927584 NA other upstream 61123 79200281 ~ 79202981 (+)
LOC110515636 LOC105020871 other upstream 198557 79023569 ~ 79065796 (+)
G927061 LOC106602167 other upstream 476541 78775935 ~ 78787563 (+)
LOC110497229 LOC106602251 other upstream 733503 78519650 ~ 78533161 (+)
LOC110510687 LOC106591138 other upstream 1539051 77722229 ~ 77734491 (+)
G927606 NA other downstream 17119 79281386 ~ 79284144 (+)
LOC110514189 LOC106593948 other downstream 333378 79597075 ~ 79601686 (+)
LOC110532970 LOC105020822 other downstream 462778 79727045 ~ 79782057 (+)
G928206 NA other downstream 762735 80027002 ~ 80028219 (+)
G928335 NA other downstream 1047677 80311944 ~ 80316569 (+)

Expression


Co-expression Network